RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 MPNDQ8N594 471 aa18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 PDGFDQ9GZP0 370 aaPredicted RBP18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 ATP8A2Q9NTI2 1148 aa18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 TAOK2Q9UL54 1235 aa18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 RANBP6O60518 1105 aaKnown RBP18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 USP17L8P0C7I0 530 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 HS1BP3Q53T59 392 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 MFSD14BQ5SR56 506 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 C2CD5Q86YS7 1000 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 ESR2Q92731 530 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 PHKBQ93100 1093 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 CLSTN2Q9H4D0 955 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 STK32BQ9NY57 414 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 MYH15Q9Y2K3 1946 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 POLR3DP05423 398 aaPredicted RBP18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 CLCN1P35523 988 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 GSTO1P78417 241 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 NTRK3Q16288 839 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 RGS22Q8NE09 1264 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 AIFM3Q96NN9 605 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 MCM9Q9NXL9 1143 aa18.72■□□□□ 0.59
AP000253.1-201ENST00000449339 GTF2IP78347 998 aa18.71■□□□□ 0.59
AP000253.1-201ENST00000449339 DPP8Q6V1X1 898 aaPredicted RBP18.71■□□□□ 0.59
AP000253.1-201ENST00000449339 BRAPQ7Z569 592 aa18.71■□□□□ 0.59
AP000253.1-201ENST00000449339 FBXW7Q969H0 707 aa18.71■□□□□ 0.59
AP000253.1-201ENST00000449339 UBAC1Q9BSL1 405 aa18.71■□□□□ 0.59
AP000253.1-201ENST00000449339 ALG1Q9BT22 464 aa18.71■□□□□ 0.59
AP000253.1-201ENST00000449339 MROH7-TTC4A0A0A0MT08 1334 aa18.71■□□□□ 0.59
AP000253.1-201ENST00000449339 ECM29Q5VYK3 1845 aa18.71■□□□□ 0.59
AP000253.1-201ENST00000449339 ERICH2A1L162 156 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 UBE2Q2LH0YL09 131 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 TNKSO95271 1327 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 CHRNA5P30532 468 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 USP5P45974 858 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 DOK7Q18PE1 504 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 SYNE3Q6ZMZ3 975 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 RBM43Q6ZSC3 357 aaKnown RBP18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 DEFB132Q7Z7B7 95 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 CKAP2LQ8IYA6 745 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 MTA3Q9BTC8 594 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 RTFDC1Q9BY42 306 aaPredicted RBP18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 RTEL1Q9NZ71 1219 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 ZNF219Q9P2Y4 722 aaPredicted RBP18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 IARSP41252 1262 aaKnown RBP18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 ME1P48163 572 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 SEC23AQ15436 765 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 TMED8Q6PL24 325 aaPredicted RBP18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 ZSCAN30Q86W11 494 aa18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.7■□□□□ 0.58
AP000253.1-201ENST00000449339 FGRP09769 529 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 BTDP43251 543 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 KIF23Q02241 960 aaPredicted RBP18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 MYSM1Q5VVJ2 828 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 CCAR1Q8IX12 1150 aaKnown RBP18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 TGFBRAP1Q8WUH2 860 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 ZC3H12CQ9C0D7 883 aaKnown RBP18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 MKRN1Q9UHC7 482 aaKnown RBP18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 CDK5RAP2Q96SN8 1893 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 SLX4Q8IY92 1834 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 KIF28PB7ZC32 967 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 TYRO3Q06418 890 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 FAM47AQ5JRC9 791 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 TMTC2Q8N394 836 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 ENAHQ8N8S7 591 aaPredicted RBP18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 MXD3Q9BW11 206 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 ARPP21Q9UBL0 812 aaPredicted RBP18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 USP25Q9UHP3 1055 aa18.69■□□□□ 0.58
AP000253.1-201ENST00000449339 BAG3O95817 575 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 LDHCP07864 332 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 PPP4CP60510 307 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 SBK1Q52WX2 424 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 ZNF654Q8IZM8 581 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 CMTR1Q8N1G2 835 aaKnown RBP18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 NUP133Q8WUM0 1156 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 ZSCAN10Q96SZ4 725 aaPredicted RBP18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 COA1Q9GZY4 146 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 POLR3EQ9NVU0 708 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 NID2Q14112 1375 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 FAM205AQ6ZU69 1335 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 H0YIN7 160 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 NMT2O60551 498 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 MAPKAPK5Q8IW41 473 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 LINC00301Q8NCQ3 95 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 DYNLL2Q96FJ2 89 aa18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 NOL10Q9BSC4 688 aaKnown RBP18.68■□□□□ 0.58
AP000253.1-201ENST00000449339 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
AP000253.1-201ENST00000449339 KRT40Q6A162 431 aa18.67■□□□□ 0.58
AP000253.1-201ENST00000449339 GOLPH3LQ9H4A5 285 aa18.67■□□□□ 0.58
AP000253.1-201ENST00000449339 SAP30BPQ9UHR5 308 aaKnown RBP18.67■□□□□ 0.58
AP000253.1-201ENST00000449339 CLIC4Q9Y696 253 aa18.67■□□□□ 0.58
AP000253.1-201ENST00000449339 MRVI1Q9Y6F6 885 aa18.67■□□□□ 0.58
AP000253.1-201ENST00000449339 F8W031 263 aaPredicted RBP18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 IFNAR1P17181 557 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 RTN1Q16799 776 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 CCDC73Q6ZRK6 1079 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 CCDC82Q8N4S0 544 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 CERS5Q8N5B7 392 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 FBXO41Q8TF61 875 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 TBC1D22AQ8WUA7 517 aa18.66■□□□□ 0.58
AP000253.1-201ENST00000449339 SLC26A6Q9BXS9 759 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms