RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 DHX36Q9H2U1 1008 aaKnown RBP21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 PPP2R3BQ9Y5P8 575 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 TACC3Q9Y6A5 838 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 ZNF213O14771 459 aa21.4■■□□□ 1.02
TRAPPC4-203ENST00000447216 EIF5BO60841 1220 aaKnown RBP21.4■■□□□ 1.02
TRAPPC4-203ENST00000447216 CYP21A2P08686 494 aa21.4■■□□□ 1.02
TRAPPC4-203ENST00000447216 IMMTQ16891 758 aaKnown RBP21.4■■□□□ 1.02
TRAPPC4-203ENST00000447216 CDCA5Q96FF9 252 aa21.4■■□□□ 1.02
TRAPPC4-203ENST00000447216 INCENPQ9NQS7 918 aa21.4■■□□□ 1.02
TRAPPC4-203ENST00000447216 SSC5DA1L4H1 1573 aa21.4■■□□□ 1.02
TRAPPC4-203ENST00000447216 TBC1D10CQ8IV04 446 aa21.39■■□□□ 1.01
TRAPPC4-203ENST00000447216 SLC44A5Q8NCS7 719 aa21.39■■□□□ 1.01
TRAPPC4-203ENST00000447216 PI4KBQ9UBF8 816 aa21.39■■□□□ 1.01
TRAPPC4-203ENST00000447216 HSPA4P34932 840 aa21.38■■□□□ 1.01
TRAPPC4-203ENST00000447216 MIGA2Q7L4E1 593 aa21.38■■□□□ 1.01
TRAPPC4-203ENST00000447216 CRACR2BQ8N4Y2 399 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC4-203ENST00000447216 DNAJC18Q9H819 358 aa21.38■■□□□ 1.01
TRAPPC4-203ENST00000447216 ANAPC4Q9UJX5 808 aa21.38■■□□□ 1.01
TRAPPC4-203ENST00000447216 ATAD5Q96QE3 1844 aa21.38■■□□□ 1.01
TRAPPC4-203ENST00000447216 ROBO3Q96MS0 1386 aa21.37■■□□□ 1.01
TRAPPC4-203ENST00000447216 EPB41L2O43491 1005 aaKnown RBP21.37■■□□□ 1.01
TRAPPC4-203ENST00000447216 RASEFQ8IZ41 740 aa21.37■■□□□ 1.01
TRAPPC4-203ENST00000447216 SERPINB13Q9UIV8 391 aa21.37■■□□□ 1.01
TRAPPC4-203ENST00000447216 FZD1Q9UP38 647 aa21.37■■□□□ 1.01
TRAPPC4-203ENST00000447216 OTOFQ9HC10 1997 aa21.36■■□□□ 1.01
TRAPPC4-203ENST00000447216 PRDM1O75626 825 aa21.36■■□□□ 1.01
TRAPPC4-203ENST00000447216 MCCP23508 829 aa21.36■■□□□ 1.01
TRAPPC4-203ENST00000447216 GABPAQ06546 454 aa21.36■■□□□ 1.01
TRAPPC4-203ENST00000447216 PRKG1Q13976 671 aa21.36■■□□□ 1.01
TRAPPC4-203ENST00000447216 C16orf86Q6ZW13 317 aa21.36■■□□□ 1.01
TRAPPC4-203ENST00000447216 FOXP4Q8IVH2 680 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC4-203ENST00000447216 TRIM34Q9BYJ4 488 aa21.36■■□□□ 1.01
TRAPPC4-203ENST00000447216 EHD4Q9H223 541 aa21.36■■□□□ 1.01
TRAPPC4-203ENST00000447216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.36■■□□□ 1.01
TRAPPC4-203ENST00000447216 ITGBL1O95965 494 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC4-203ENST00000447216 CDK8P49336 464 aa21.35■■□□□ 1.01
TRAPPC4-203ENST00000447216 SUPT20HL1Q3ZLR7 823 aa21.35■■□□□ 1.01
TRAPPC4-203ENST00000447216 AKNAD1Q5T1N1 836 aa21.35■■□□□ 1.01
TRAPPC4-203ENST00000447216 RNF20Q5VTR2 975 aa21.35■■□□□ 1.01
TRAPPC4-203ENST00000447216 STOX1Q6ZVD7 989 aa21.35■■□□□ 1.01
TRAPPC4-203ENST00000447216 SNX14Q9Y5W7 946 aa21.35■■□□□ 1.01
TRAPPC4-203ENST00000447216 NEDD4P46934 1319 aa21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 SLC3A2P08195 630 aaKnown RBP21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 SHMT1P34896 483 aa21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 METTL16Q86W50 562 aaKnown RBP21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 NKX2-3Q8TAU0 364 aa21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 STAG1Q8WVM7 1258 aa21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 KCNB2Q92953 911 aa21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 C22orf23Q9BZE7 217 aa21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 ZNF408Q9H9D4 720 aa21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 UPF2Q9HAU5 1272 aaKnown RBP21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 TOMM22Q9NS69 142 aa21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.34■■□□□ 1.01
TRAPPC4-203ENST00000447216 E7EWF7 191 aa21.33■■□□□ 1.01
TRAPPC4-203ENST00000447216 RRP12Q5JTH9 1297 aaKnown RBP21.33■■□□□ 1.01
TRAPPC4-203ENST00000447216 MFSD6Q6ZSS7 791 aa21.33■■□□□ 1.01
TRAPPC4-203ENST00000447216 MKNK2Q9HBH9 465 aa21.33■■□□□ 1.01
TRAPPC4-203ENST00000447216 HERC5Q9UII4 1024 aaKnown RBP21.33■■□□□ 1.01
TRAPPC4-203ENST00000447216 TBC1D12O60347 775 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 TOMM70O94826 608 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 MAP3K10Q02779 954 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 PDE4BQ07343 736 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 RRP1BQ14684 758 aaKnown RBP21.32■■□□□ 1
TRAPPC4-203ENST00000447216 DCAF15Q66K64 600 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 SMC1BQ8NDV3 1235 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 RBM46Q8TBY0 533 aaKnown RBP21.32■■□□□ 1
TRAPPC4-203ENST00000447216 HOOK2Q96ED9 719 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 ZNF341Q9BYN7 854 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 SWAP70Q9UH65 585 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 PAPPA2Q9BXP8 1791 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 DOCK1Q14185 1865 aa21.32■■□□□ 1
TRAPPC4-203ENST00000447216 ZKSCAN1P17029 563 aaPredicted RBP21.31■■□□□ 1
TRAPPC4-203ENST00000447216 RASA1P20936 1047 aa21.31■■□□□ 1
TRAPPC4-203ENST00000447216 NF2P35240 595 aa21.31■■□□□ 1
TRAPPC4-203ENST00000447216 COL9A3Q14050 684 aaPredicted RBP21.31■■□□□ 1
TRAPPC4-203ENST00000447216 SHROOM1Q2M3G4 852 aaPredicted RBP21.31■■□□□ 1
TRAPPC4-203ENST00000447216 ADCK5Q3MIX3 580 aa21.31■■□□□ 1
TRAPPC4-203ENST00000447216 MOB2Q70IA6 237 aa21.31■■□□□ 1
TRAPPC4-203ENST00000447216 RNF41Q9H4P4 317 aaPredicted RBP21.31■■□□□ 1
TRAPPC4-203ENST00000447216 GREB1LQ9C091 1923 aaPredicted RBP21.3■■□□□ 1
TRAPPC4-203ENST00000447216 B4E1Z4 1266 aa21.3■■□□□ 1
TRAPPC4-203ENST00000447216 ORC4O43929 436 aa21.3■■□□□ 1
TRAPPC4-203ENST00000447216 USP2O75604 605 aaPredicted RBP21.3■■□□□ 1
TRAPPC4-203ENST00000447216 CELF2O95319 508 aaKnown RBP21.3■■□□□ 1
TRAPPC4-203ENST00000447216 GDF11O95390 407 aa21.3■■□□□ 1
TRAPPC4-203ENST00000447216 FGRP09769 529 aa21.3■■□□□ 1
TRAPPC4-203ENST00000447216 TTLL12Q14166 644 aaPredicted RBP21.3■■□□□ 1
TRAPPC4-203ENST00000447216 PHF20L1A8MW92 1017 aa21.29■■□□□ 1
TRAPPC4-203ENST00000447216 RANBP6O60518 1105 aaKnown RBP21.29■■□□□ 1
TRAPPC4-203ENST00000447216 AKR1B1P15121 316 aa21.29■■□□□ 1
TRAPPC4-203ENST00000447216 TSGA10IPQ3SY00 556 aa21.29■■□□□ 1
TRAPPC4-203ENST00000447216 FAM47AQ5JRC9 791 aa21.29■■□□□ 1
TRAPPC4-203ENST00000447216 TATDN1Q6P1N9 297 aa21.29■■□□□ 1
TRAPPC4-203ENST00000447216 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
TRAPPC4-203ENST00000447216 TBC1D32Q96NH3 1257 aa21.29■■□□□ 1
TRAPPC4-203ENST00000447216 ANGEL1Q9UNK9 670 aaKnown RBP21.29■■□□□ 1
TRAPPC4-203ENST00000447216 MYH4Q9Y623 1939 aa21.28■■□□□ 1
TRAPPC4-203ENST00000447216 PPP1R12BO60237 982 aaPredicted RBP21.28■■□□□ 1
TRAPPC4-203ENST00000447216 INPP5BP32019 993 aa21.28■■□□□ 1
TRAPPC4-203ENST00000447216 JAG1P78504 1218 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms