RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FOXP1Q9H334 677 aaPredicted RBP21.88■■□□□ 1.09
SDCBP-204ENST00000447182 TMOD3Q9NYL9 352 aa21.88■■□□□ 1.09
SDCBP-204ENST00000447182 FBXO2Q9UK22 296 aaPredicted RBP21.88■■□□□ 1.09
SDCBP-204ENST00000447182 IFIT3O14879 490 aaKnown RBP21.88■■□□□ 1.09
SDCBP-204ENST00000447182 URI1O94763 535 aaPredicted RBP21.88■■□□□ 1.09
SDCBP-204ENST00000447182 RILPL1Q5EBL4 403 aa21.88■■□□□ 1.09
SDCBP-204ENST00000447182 IFNL3Q8IZI9 196 aa21.88■■□□□ 1.09
SDCBP-204ENST00000447182 EPB41L4AQ9HCS5 686 aaPredicted RBP21.88■■□□□ 1.09
SDCBP-204ENST00000447182 ARAP2Q8WZ64 1704 aa21.87■■□□□ 1.09
SDCBP-204ENST00000447182 FOXN1O15353 648 aa21.87■■□□□ 1.09
SDCBP-204ENST00000447182 STARD3NLO95772 234 aa21.87■■□□□ 1.09
SDCBP-204ENST00000447182 GOLGA8FQ08AF8 430 aa21.87■■□□□ 1.09
SDCBP-204ENST00000447182 GOLGA8DPQ0D2H9 430 aa21.87■■□□□ 1.09
SDCBP-204ENST00000447182 MORC3Q14149 939 aa21.87■■□□□ 1.09
SDCBP-204ENST00000447182 SPECC1LQ69YQ0 1117 aa21.87■■□□□ 1.09
SDCBP-204ENST00000447182 DNAJC10Q8IXB1 793 aa21.87■■□□□ 1.09
SDCBP-204ENST00000447182 KRT23Q9C075 422 aa21.87■■□□□ 1.09
SDCBP-204ENST00000447182 ANKRD36CQ5JPF3 1778 aa21.87■■□□□ 1.09
SDCBP-204ENST00000447182 DOCK2Q92608 1830 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 BTBD18B2RXH4 712 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 UBE2Q2LH0YL09 131 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 ATP8B1O43520 1251 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 TC2NQ8N9U0 490 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 HLFQ16534 295 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 AKNAD1Q5T1N1 836 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 TMCO3Q6UWJ1 677 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 DIS3L2Q8IYB7 885 aaKnown RBP21.86■■□□□ 1.09
SDCBP-204ENST00000447182 LPIN2Q92539 896 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 MTA3Q9BTC8 594 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 NAPBQ9H115 298 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 NFE2L3Q9Y4A8 694 aa21.86■■□□□ 1.09
SDCBP-204ENST00000447182 LRP5O75197 1615 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 FGFR2P21802 821 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 MAP3K9P80192 1104 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 KANK3Q6NY19 840 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 TRIM22Q8IYM9 498 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 CARD6Q9BX69 1037 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 INCENPQ9NQS7 918 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 IRS4O14654 1257 aaPredicted RBP21.85■■□□□ 1.09
SDCBP-204ENST00000447182 TRHP20396 242 aaPredicted RBP21.85■■□□□ 1.09
SDCBP-204ENST00000447182 RCAN1P53805 252 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 FMR1Q06787 632 aaKnown RBP eCLIP21.85■■□□□ 1.09
SDCBP-204ENST00000447182 PUM3Q15397 648 aaKnown RBP21.85■■□□□ 1.09
SDCBP-204ENST00000447182 NUTM2AQ8IVF1 878 aaPredicted RBP21.85■■□□□ 1.09
SDCBP-204ENST00000447182 SPATA20Q8TB22 786 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 SMARCE1Q969G3 411 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 ST7Q9NRC1 585 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 TACC3Q9Y6A5 838 aa21.85■■□□□ 1.09
SDCBP-204ENST00000447182 POLR2DO15514 142 aaKnown RBP21.84■■□□□ 1.09
SDCBP-204ENST00000447182 GPTP24298 496 aa21.84■■□□□ 1.09
SDCBP-204ENST00000447182 GUCY1A2P33402 732 aa21.84■■□□□ 1.09
SDCBP-204ENST00000447182 PLA2G4AP47712 749 aa21.84■■□□□ 1.09
SDCBP-204ENST00000447182 SPECC1Q5M775 1068 aa21.84■■□□□ 1.09
SDCBP-204ENST00000447182 SRPRBQ9Y5M8 271 aaKnown RBP21.84■■□□□ 1.09
SDCBP-204ENST00000447182 CCDC66A2RUB6 948 aa21.83■■□□□ 1.09
SDCBP-204ENST00000447182 PDE8AO60658 829 aa21.83■■□□□ 1.09
SDCBP-204ENST00000447182 CASQ1P31415 396 aa21.83■■□□□ 1.09
SDCBP-204ENST00000447182 GRIN1Q05586 938 aa21.83■■□□□ 1.09
SDCBP-204ENST00000447182 CTDSPL2Q05D32 466 aa21.83■■□□□ 1.09
SDCBP-204ENST00000447182 CT47A1Q5JQC4 288 aaPredicted RBP21.83■■□□□ 1.09
SDCBP-204ENST00000447182 STAG1Q8WVM7 1258 aa21.83■■□□□ 1.09
SDCBP-204ENST00000447182 SERTAD1Q9UHV2 236 aa21.83■■□□□ 1.09
SDCBP-204ENST00000447182 MROH5Q6ZUA9 1318 aa21.83■■□□□ 1.09
SDCBP-204ENST00000447182 DEXIO95424 95 aa21.83■■□□□ 1.08
SDCBP-204ENST00000447182 CDK11BP21127 795 aaKnown RBP21.83■■□□□ 1.08
SDCBP-204ENST00000447182 MAP3K12Q12852 859 aa21.83■■□□□ 1.08
SDCBP-204ENST00000447182 RTN1Q16799 776 aa21.83■■□□□ 1.08
SDCBP-204ENST00000447182 PTPN21Q16825 1174 aa21.83■■□□□ 1.08
SDCBP-204ENST00000447182 MFSD6Q6ZSS7 791 aa21.83■■□□□ 1.08
SDCBP-204ENST00000447182 SPATA5Q8NB90 893 aa21.83■■□□□ 1.08
SDCBP-204ENST00000447182 TAOK2Q9UL54 1235 aa21.83■■□□□ 1.08
SDCBP-204ENST00000447182 ASAP1Q9ULH1 1129 aa21.83■■□□□ 1.08
SDCBP-204ENST00000447182 CEP131Q9UPN4 1083 aa21.83■■□□□ 1.08
SDCBP-204ENST00000447182 GSG1L2A8MUP6 293 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 ACTN4O43707 911 aaKnown RBP21.82■■□□□ 1.08
SDCBP-204ENST00000447182 MBD4O95243 580 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 PRR29P0C7W0 189 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 ERCC5P28715 1186 aaPredicted RBP21.82■■□□□ 1.08
SDCBP-204ENST00000447182 SART3Q15020 963 aaKnown RBP21.82■■□□□ 1.08
SDCBP-204ENST00000447182 GPR161Q8N6U8 529 aaKnown RBP21.82■■□□□ 1.08
SDCBP-204ENST00000447182 WDR24Q96S15 920 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 MRFAP1Q9Y605 127 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 CCDC196A0A1B0GTZ2 297 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 GNG11P61952 73 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 NR1I3Q14994 352 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 TMTC2Q8N394 836 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 CRACR2BQ8N4Y2 399 aaPredicted RBP21.82■■□□□ 1.08
SDCBP-204ENST00000447182 PDILTQ8N807 584 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 KCNJ14Q9UNX9 436 aa21.82■■□□□ 1.08
SDCBP-204ENST00000447182 GNAT2P19087 354 aa21.81■■□□□ 1.08
SDCBP-204ENST00000447182 PLCD1P51178 756 aa21.81■■□□□ 1.08
SDCBP-204ENST00000447182 TOGARAM2Q6ZUX3 1019 aa21.81■■□□□ 1.08
SDCBP-204ENST00000447182 MAGEB6Q8N7X4 407 aa21.81■■□□□ 1.08
SDCBP-204ENST00000447182 PIGBQ92521 554 aa21.81■■□□□ 1.08
SDCBP-204ENST00000447182 KIFC2Q96AC6 838 aa21.81■■□□□ 1.08
SDCBP-204ENST00000447182 MED15Q96RN5 788 aa21.81■■□□□ 1.08
SDCBP-204ENST00000447182 RAI14Q9P0K7 980 aa21.81■■□□□ 1.08
SDCBP-204ENST00000447182 PCDHB6Q9Y5E3 794 aa21.81■■□□□ 1.08
SDCBP-204ENST00000447182 A0A1B0GTH6 734 aa21.8■■□□□ 1.08
SDCBP-204ENST00000447182 WTAPQ15007 396 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms