RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 SNX14Q9Y5W7 946 aa20.65■□□□□ 0.9
SGCE-206ENST00000445866 ATRNL1Q5VV63 1379 aa20.65■□□□□ 0.9
SGCE-206ENST00000445866 CDK8P49336 464 aa20.64■□□□□ 0.9
SGCE-206ENST00000445866 CHADLQ6NUI6 762 aa20.64■□□□□ 0.9
SGCE-206ENST00000445866 TBC1D10CQ8IV04 446 aa20.64■□□□□ 0.9
SGCE-206ENST00000445866 ZNF784Q8NCA9 323 aaPredicted RBP20.64■□□□□ 0.9
SGCE-206ENST00000445866 HOOK2Q96ED9 719 aa20.64■□□□□ 0.9
SGCE-206ENST00000445866 NBPF3Q9H094 633 aa20.64■□□□□ 0.9
SGCE-206ENST00000445866 EHD4Q9H223 541 aa20.64■□□□□ 0.9
SGCE-206ENST00000445866 RNF41Q9H4P4 317 aaPredicted RBP20.64■□□□□ 0.9
SGCE-206ENST00000445866 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.64■□□□□ 0.9
SGCE-206ENST00000445866 ZNF287Q9HBT7 754 aa20.64■□□□□ 0.9
SGCE-206ENST00000445866 TOMM22Q9NS69 142 aa20.64■□□□□ 0.9
SGCE-206ENST00000445866 WDR90Q96KV7 1748 aa20.64■□□□□ 0.89
SGCE-206ENST00000445866 FAM196BA6NMK8 535 aa20.64■□□□□ 0.89
SGCE-206ENST00000445866 E7EWF7 191 aa20.64■□□□□ 0.89
SGCE-206ENST00000445866 KIF3CO14782 793 aa20.64■□□□□ 0.89
SGCE-206ENST00000445866 PRDM1O75626 825 aa20.64■□□□□ 0.89
SGCE-206ENST00000445866 TSGA10IPQ3SY00 556 aa20.64■□□□□ 0.89
SGCE-206ENST00000445866 C16orf86Q6ZW13 317 aa20.64■□□□□ 0.89
SGCE-206ENST00000445866 SLC44A5Q8NCS7 719 aa20.64■□□□□ 0.89
SGCE-206ENST00000445866 MYH2Q9UKX2 1941 aa20.64■□□□□ 0.89
SGCE-206ENST00000445866 GABPAQ06546 454 aa20.63■□□□□ 0.89
SGCE-206ENST00000445866 TRDNQ13061 729 aa20.63■□□□□ 0.89
SGCE-206ENST00000445866 RRP12Q5JTH9 1297 aaKnown RBP20.63■□□□□ 0.89
SGCE-206ENST00000445866 METTL16Q86W50 562 aaKnown RBP20.63■□□□□ 0.89
SGCE-206ENST00000445866 SWAP70Q9UH65 585 aa20.63■□□□□ 0.89
SGCE-206ENST00000445866 HERC5Q9UII4 1024 aaKnown RBP20.63■□□□□ 0.89
SGCE-206ENST00000445866 TACC3Q9Y6A5 838 aa20.63■□□□□ 0.89
SGCE-206ENST00000445866 MAST2Q6P0Q8 1798 aa20.62■□□□□ 0.89
SGCE-206ENST00000445866 TRAF5O00463 557 aa20.62■□□□□ 0.89
SGCE-206ENST00000445866 TBC1D12O60347 775 aa20.62■□□□□ 0.89
SGCE-206ENST00000445866 KRT32Q14532 448 aa20.62■□□□□ 0.89
SGCE-206ENST00000445866 ZNF444Q8N0Y2 327 aaPredicted RBP20.62■□□□□ 0.89
SGCE-206ENST00000445866 STAG1Q8WVM7 1258 aa20.62■□□□□ 0.89
SGCE-206ENST00000445866 CDCA5Q96FF9 252 aa20.62■□□□□ 0.89
SGCE-206ENST00000445866 RBM25P49756 843 aaKnown RBP20.61■□□□□ 0.89
SGCE-206ENST00000445866 ANAPC15P60006 121 aa20.61■□□□□ 0.89
SGCE-206ENST00000445866 PRKG1Q13976 671 aa20.61■□□□□ 0.89
SGCE-206ENST00000445866 DCAF15Q66K64 600 aa20.61■□□□□ 0.89
SGCE-206ENST00000445866 TBC1D32Q96NH3 1257 aa20.61■□□□□ 0.89
SGCE-206ENST00000445866 RANBP6O60518 1105 aaKnown RBP20.61■□□□□ 0.89
SGCE-206ENST00000445866 FGRP09769 529 aa20.61■□□□□ 0.89
SGCE-206ENST00000445866 PCP11498 1178 aaKnown RBP20.61■□□□□ 0.89
SGCE-206ENST00000445866 NF2P35240 595 aa20.61■□□□□ 0.89
SGCE-206ENST00000445866 MAP3K10Q02779 954 aa20.61■□□□□ 0.89
SGCE-206ENST00000445866 STOX1Q6ZVD7 989 aa20.61■□□□□ 0.89
SGCE-206ENST00000445866 CNNM2Q9H8M5 875 aa20.61■□□□□ 0.89
SGCE-206ENST00000445866 TAOK2Q9UL54 1235 aa20.61■□□□□ 0.89
SGCE-206ENST00000445866 ADAMTSL1Q8N6G6 1762 aa20.6■□□□□ 0.89
SGCE-206ENST00000445866 ADCK5Q3MIX3 580 aa20.6■□□□□ 0.89
SGCE-206ENST00000445866 JAKMIP1Q96N16 626 aaKnown RBP20.6■□□□□ 0.89
SGCE-206ENST00000445866 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
SGCE-206ENST00000445866 KRT23Q9C075 422 aa20.6■□□□□ 0.89
SGCE-206ENST00000445866 DNAJC18Q9H819 358 aa20.6■□□□□ 0.89
SGCE-206ENST00000445866 ORC4O43929 436 aa20.59■□□□□ 0.89
SGCE-206ENST00000445866 PPP1R12BO60237 982 aaPredicted RBP20.59■□□□□ 0.89
SGCE-206ENST00000445866 PSMA5P28066 241 aa20.59■□□□□ 0.89
SGCE-206ENST00000445866 SHMT1P34896 483 aa20.59■□□□□ 0.89
SGCE-206ENST00000445866 FMR1Q06787 632 aaKnown RBP eCLIP20.59■□□□□ 0.89
SGCE-206ENST00000445866 CERKLQ49MI3 558 aaPredicted RBP20.59■□□□□ 0.89
SGCE-206ENST00000445866 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
SGCE-206ENST00000445866 NCOA7Q8NI08 942 aa20.59■□□□□ 0.89
SGCE-206ENST00000445866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.59■□□□□ 0.89
SGCE-206ENST00000445866 COL2A1P02458 1487 aaPredicted RBP20.59■□□□□ 0.89
SGCE-206ENST00000445866 B4E1Z4 1266 aa20.58■□□□□ 0.89
SGCE-206ENST00000445866 ITGBL1O95965 494 aaPredicted RBP20.58■□□□□ 0.89
SGCE-206ENST00000445866 FAM47AQ5JRC9 791 aa20.58■□□□□ 0.89
SGCE-206ENST00000445866 TATDN1Q6P1N9 297 aa20.58■□□□□ 0.89
SGCE-206ENST00000445866 ESR2Q92731 530 aa20.58■□□□□ 0.89
SGCE-206ENST00000445866 ZNF341Q9BYN7 854 aa20.58■□□□□ 0.89
SGCE-206ENST00000445866 ZNF408Q9H9D4 720 aa20.58■□□□□ 0.89
SGCE-206ENST00000445866 TOMM70O94826 608 aa20.58■□□□□ 0.88
SGCE-206ENST00000445866 RASA1P20936 1047 aa20.58■□□□□ 0.88
SGCE-206ENST00000445866 NEDD4P46934 1319 aa20.58■□□□□ 0.88
SGCE-206ENST00000445866 TFAP4Q01664 338 aa20.58■□□□□ 0.88
SGCE-206ENST00000445866 TTLL12Q14166 644 aaPredicted RBP20.58■□□□□ 0.88
SGCE-206ENST00000445866 SMC1BQ8NDV3 1235 aa20.58■□□□□ 0.88
SGCE-206ENST00000445866 FZD1Q9UP38 647 aa20.58■□□□□ 0.88
SGCE-206ENST00000445866 ROBO3Q96MS0 1386 aa20.57■□□□□ 0.88
SGCE-206ENST00000445866 KDM4AO75164 1064 aa20.57■□□□□ 0.88
SGCE-206ENST00000445866 USP2O75604 605 aaPredicted RBP20.57■□□□□ 0.88
SGCE-206ENST00000445866 CCDC17Q96LX7 622 aa20.57■□□□□ 0.88
SGCE-206ENST00000445866 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
SGCE-206ENST00000445866 AK9Q5TCS8 1911 aa20.56■□□□□ 0.88
SGCE-206ENST00000445866 TSPY2A6NKD2 308 aa20.56■□□□□ 0.88
SGCE-206ENST00000445866 PHF20L1A8MW92 1017 aa20.56■□□□□ 0.88
SGCE-206ENST00000445866 MPHOSPH10O00566 681 aaKnown RBP20.56■□□□□ 0.88
SGCE-206ENST00000445866 HMGB1P09429 215 aaKnown RBP20.56■□□□□ 0.88
SGCE-206ENST00000445866 CASTP20810 708 aaKnown RBP20.56■□□□□ 0.88
SGCE-206ENST00000445866 TM6SF1Q9BZW5 370 aa20.56■□□□□ 0.88
SGCE-206ENST00000445866 SCN4AP35499 1836 aa20.55■□□□□ 0.88
SGCE-206ENST00000445866 TSPY3P0CV98 308 aa20.55■□□□□ 0.88
SGCE-206ENST00000445866 TSPY8P0CW00 308 aa20.55■□□□□ 0.88
SGCE-206ENST00000445866 RRP1BQ14684 758 aaKnown RBP20.55■□□□□ 0.88
SGCE-206ENST00000445866 BLOC1S2Q6QNY1 142 aa20.55■□□□□ 0.88
SGCE-206ENST00000445866 NKX2-3Q8TAU0 364 aa20.55■□□□□ 0.88
SGCE-206ENST00000445866 RBM46Q8TBY0 533 aaKnown RBP20.55■□□□□ 0.88
SGCE-206ENST00000445866 CYP46A1Q9Y6A2 500 aa20.55■□□□□ 0.88
SGCE-206ENST00000445866 MYH7P12883 1935 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms