RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 DNAJB2P25686 324 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 SMARCA1P28370 1054 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 HPDP32754 393 aaPredicted RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 ADD2P35612 726 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 RAD52P43351 418 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 STT3AP46977 705 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 CTCFP49711 727 aaPredicted RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 NEK3P51956 506 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 CASP7P55210 303 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 CLDN10P78369 228 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 CCT2P78371 535 aaKnown RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 FOXK1P85037 733 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 APBA1Q02410 837 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 NR1H3Q13133 447 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 COL9A2Q14055 689 aaPredicted RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 EIF4A2Q14240 407 aaKnown RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 MYBPC3Q14896 1274 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 FXNQ16595 210 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 OCLNQ16625 522 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 TM4SF20Q53R12 229 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 IRGCQ6NXR0 463 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 LVRNQ6Q4G3 990 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 CYP26C1Q6V0L0 522 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 C1orf122Q6ZSJ8 110 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 BEND5Q7L4P6 421 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 SAPCD2Q86UD0 394 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 SULF1Q8IWU6 871 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 LILRB2Q8N423 598 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 NGEFQ8N5V2 710 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 JMYQ8N9B5 988 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 ZNF280CQ8ND82 737 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 RIN3Q8TB24 985 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 KIAA1524Q8TCG1 905 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 COL26A1Q96A83 441 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 MS4A4AQ96JQ5 239 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 UROC1Q96N76 676 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 PURBQ96QR8 312 aaKnown RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 KIF2CQ99661 725 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 RHOXF2Q9BQY4 288 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 TCHPQ9BT92 498 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 UTP14AQ9BVJ6 771 aaKnown RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 OSBPL5Q9H0X9 879 aaPredicted RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 RMI1Q9H9A7 625 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 HMX1Q9NP08 348 aaPredicted RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 MED4Q9NPJ6 270 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 AASDHPPTQ9NRN7 309 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 KRT82Q9NSB4 513 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 GINM1Q9NU53 330 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 CCDC87Q9NVE4 849 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 TRMT1Q9NXH9 659 aaKnown RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 OBP2AQ9NY56 170 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 DONSONQ9NYP3 566 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 PRKAG3Q9UGI9 489 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 HERC5Q9UII4 1024 aaKnown RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 TSKSQ9UJT2 592 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 ZNF180Q9UJW8 692 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 MSRB2Q9Y3D2 182 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 DNMT3AQ9Y6K1 912 aaPredicted RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 USP31Q70CQ4 1352 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 A0A1B0GVC2 190 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 hCG_1642624A0A1W2PR95 340 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 FSD2A1L4K1 749 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 CCDC85CA6NKD9 419 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 VGLL3A8MV65 326 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 HNRNPCL2B2RXH8 293 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 NDC80O14777 642 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ERC2O15083 957 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 FYB1O15117 783 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 HNRNPCL1O60812 293 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 PPFIA2O75334 1257 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 TBCAO75347 108 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 B3GALNT1O75752 331 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 MBD4O95243 580 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 EIF4BP23588 611 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 HSPA1LP34931 641 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 RDXP35241 583 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 GNL1P36915 607 aaPredicted RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 CCDC15Q0P6D6 951 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 APOBRQ0VD83 1088 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 RASGRF1Q13972 1273 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 PPP2R5BQ15173 497 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ANKRD1Q15327 319 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 SAFBQ15424 915 aaKnown RBP eCLIP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 EML3Q32P44 896 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 MINDY4Q4G0A6 757 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ODF2Q5BJF6 829 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 HECTD3Q5T447 861 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 CEP135Q66GS9 1140 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 CDCA2Q69YH5 1023 aaPredicted RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 TTC19Q6DKK2 380 aaPredicted RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 PLBD1Q6P4A8 553 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 FASTKD5Q7L8L6 764 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 EEPD1Q7L9B9 569 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 RALYLQ86SE5 291 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 SPATS2Q86XZ4 545 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 THNSL2Q86YJ6 484 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 MYLK4Q86YV6 388 aaPredicted RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ANKRD18AQ8IVF6 992 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 NIM1KQ8IY84 436 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ELOA2Q8IYF1 753 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms