RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 HABP4Q5JVS0 413 aaKnown RBP18.96■□□□□ 0.63
SEC13-213ENST00000445064 TREML2Q5T2D2 321 aa18.96■□□□□ 0.63
SEC13-213ENST00000445064 NAA16Q6N069 864 aaPredicted RBP18.96■□□□□ 0.63
SEC13-213ENST00000445064 MIER1Q8N108 512 aa18.96■□□□□ 0.63
SEC13-213ENST00000445064 SMCR8Q8TEV9 937 aaPredicted RBP18.96■□□□□ 0.63
SEC13-213ENST00000445064 AATFQ9NY61 560 aaKnown RBP eCLIP18.96■□□□□ 0.63
SEC13-213ENST00000445064 PCDH10Q9P2E7 1040 aa18.96■□□□□ 0.63
SEC13-213ENST00000445064 AGTPBP1Q9UPW5 1226 aa18.96■□□□□ 0.63
SEC13-213ENST00000445064 CCL5P13501 91 aa18.95■□□□□ 0.62
SEC13-213ENST00000445064 CAP2P40123 477 aa18.95■□□□□ 0.62
SEC13-213ENST00000445064 FTSJ3Q8IY81 847 aaKnown RBP18.95■□□□□ 0.62
SEC13-213ENST00000445064 MKI67P46013 3256 aaKnown RBP18.94■□□□□ 0.62
SEC13-213ENST00000445064 BAG3O95817 575 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 RLBP1P12271 317 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 ZAP70P43403 619 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 ADGRA1Q86SQ6 560 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 ITPRIPQ8IWB1 547 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 ANKRD13CQ8N6S4 541 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 ZNF280CQ8ND82 737 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 SHISA4Q96DD7 197 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 CCDC8Q9H0W5 538 aaPredicted RBP18.94■□□□□ 0.62
SEC13-213ENST00000445064 RNF208Q9H0X6 261 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 MGAMO43451 1857 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 PTPRFP10586 1907 aa18.94■□□□□ 0.62
SEC13-213ENST00000445064 COL2A1P02458 1487 aaPredicted RBP18.93■□□□□ 0.62
SEC13-213ENST00000445064 USP17L5A8MUK1 530 aa18.93■□□□□ 0.62
SEC13-213ENST00000445064 FLT3LGP49771 235 aa18.93■□□□□ 0.62
SEC13-213ENST00000445064 PPP4CP60510 307 aa18.93■□□□□ 0.62
SEC13-213ENST00000445064 UBXN2AP68543 259 aa18.93■□□□□ 0.62
SEC13-213ENST00000445064 MAPKAPK5Q8IW41 473 aa18.93■□□□□ 0.62
SEC13-213ENST00000445064 TGFBRAP1Q8WUH2 860 aa18.93■□□□□ 0.62
SEC13-213ENST00000445064 PI4KBQ9UBF8 816 aa18.93■□□□□ 0.62
SEC13-213ENST00000445064 HERC5Q9UII4 1024 aaKnown RBP18.93■□□□□ 0.62
SEC13-213ENST00000445064 NOP58Q9Y2X3 529 aaKnown RBP18.93■□□□□ 0.62
SEC13-213ENST00000445064 TNPO2O14787 897 aaKnown RBP18.92■□□□□ 0.62
SEC13-213ENST00000445064 ADCY3O60266 1144 aa18.92■□□□□ 0.62
SEC13-213ENST00000445064 GJB1P08034 283 aa18.92■□□□□ 0.62
SEC13-213ENST00000445064 GJA8P48165 433 aa18.92■□□□□ 0.62
SEC13-213ENST00000445064 HMGCS2P54868 508 aa18.92■□□□□ 0.62
SEC13-213ENST00000445064 PROCA1Q8NCQ7 364 aaPredicted RBP18.92■□□□□ 0.62
SEC13-213ENST00000445064 SLAIN1Q8ND83 568 aa18.92■□□□□ 0.62
SEC13-213ENST00000445064 NKX2-3Q8TAU0 364 aa18.92■□□□□ 0.62
SEC13-213ENST00000445064 ZNF512BQ96KM6 892 aaPredicted RBP18.92■□□□□ 0.62
SEC13-213ENST00000445064 DHX36Q9H2U1 1008 aaKnown RBP18.92■□□□□ 0.62
SEC13-213ENST00000445064 PIH1D3Q9NQM4 214 aaKnown RBP18.92■□□□□ 0.62
SEC13-213ENST00000445064 TLR7Q9NYK1 1049 aaKnown RBP18.92■□□□□ 0.62
SEC13-213ENST00000445064 ELNP15502 786 aa18.91■□□□□ 0.62
SEC13-213ENST00000445064 PLCG2P16885 1265 aa18.91■□□□□ 0.62
SEC13-213ENST00000445064 EAF2Q96CJ1 260 aaPredicted RBP18.91■□□□□ 0.62
SEC13-213ENST00000445064 UNC93B1Q9H1C4 597 aa18.91■□□□□ 0.62
SEC13-213ENST00000445064 DBNLQ9UJU6 430 aaKnown RBP18.91■□□□□ 0.62
SEC13-213ENST00000445064 PNMA3Q9UL41 463 aa18.91■□□□□ 0.62
SEC13-213ENST00000445064 PALD1Q9ULE6 856 aa18.91■□□□□ 0.62
SEC13-213ENST00000445064 BRCA2P51587 3418 aa18.9■□□□□ 0.62
SEC13-213ENST00000445064 DYNLL1P63167 89 aaKnown RBP18.9■□□□□ 0.62
SEC13-213ENST00000445064 JAG1P78504 1218 aa18.9■□□□□ 0.62
SEC13-213ENST00000445064 FOXP4Q8IVH2 680 aaPredicted RBP18.9■□□□□ 0.62
SEC13-213ENST00000445064 DPF3Q92784 378 aa18.9■□□□□ 0.62
SEC13-213ENST00000445064 TBC1D2Q9BYX2 928 aa18.9■□□□□ 0.62
SEC13-213ENST00000445064 AS3MTQ9HBK9 375 aa18.9■□□□□ 0.62
SEC13-213ENST00000445064 TAOK2Q9UL54 1235 aa18.9■□□□□ 0.62
SEC13-213ENST00000445064 COLQQ9Y215 455 aaPredicted RBP18.9■□□□□ 0.62
SEC13-213ENST00000445064 ATAD5Q96QE3 1844 aa18.89■□□□□ 0.61
SEC13-213ENST00000445064 MYO5AQ9Y4I1 1855 aaKnown RBP18.89■□□□□ 0.61
SEC13-213ENST00000445064 H0YGN5 161 aa18.89■□□□□ 0.61
SEC13-213ENST00000445064 SH3D19Q5HYK7 790 aa18.89■□□□□ 0.61
SEC13-213ENST00000445064 CRACR2BQ8N4Y2 399 aaPredicted RBP18.89■□□□□ 0.61
SEC13-213ENST00000445064 PXYLP1Q8TE99 480 aa18.89■□□□□ 0.61
SEC13-213ENST00000445064 COA7Q96BR5 231 aa18.89■□□□□ 0.61
SEC13-213ENST00000445064 SAP30BPQ9UHR5 308 aaKnown RBP18.89■□□□□ 0.61
SEC13-213ENST00000445064 FLT1P17948 1338 aa18.89■□□□□ 0.61
SEC13-213ENST00000445064 CYP7A1P22680 504 aa18.88■□□□□ 0.61
SEC13-213ENST00000445064 PABPC4Q13310 644 aaKnown RBP eCLIP18.88■□□□□ 0.61
SEC13-213ENST00000445064 IRF5Q13568 498 aa18.88■□□□□ 0.61
SEC13-213ENST00000445064 FAM110CQ1W6H9 321 aa18.88■□□□□ 0.61
SEC13-213ENST00000445064 SHROOM1Q2M3G4 852 aaPredicted RBP18.88■□□□□ 0.61
SEC13-213ENST00000445064 U2AF1L4Q8WU68 220 aaKnown RBP18.88■□□□□ 0.61
SEC13-213ENST00000445064 WDR18Q9BV38 432 aa18.88■□□□□ 0.61
SEC13-213ENST00000445064 ASCC2Q9H1I8 757 aaPredicted RBP18.88■□□□□ 0.61
SEC13-213ENST00000445064 DNAJC18Q9H819 358 aa18.88■□□□□ 0.61
SEC13-213ENST00000445064 NDUFB9Q9Y6M9 179 aa18.88■□□□□ 0.61
SEC13-213ENST00000445064 IDH1O75874 414 aaKnown RBP18.87■□□□□ 0.61
SEC13-213ENST00000445064 GDF11O95390 407 aa18.87■□□□□ 0.61
SEC13-213ENST00000445064 SGPL1O95470 568 aa18.87■□□□□ 0.61
SEC13-213ENST00000445064 INHAP05111 366 aa18.87■□□□□ 0.61
SEC13-213ENST00000445064 ASNSP08243 561 aa18.87■□□□□ 0.61
SEC13-213ENST00000445064 GCLCP48506 637 aaPredicted RBP18.87■□□□□ 0.61
SEC13-213ENST00000445064 MTMR2Q13614 643 aa18.87■□□□□ 0.61
SEC13-213ENST00000445064 CEP85Q6P2H3 762 aa18.87■□□□□ 0.61
SEC13-213ENST00000445064 METTL16Q86W50 562 aaKnown RBP18.87■□□□□ 0.61
SEC13-213ENST00000445064 TRIM34Q9BYJ4 488 aa18.87■□□□□ 0.61
SEC13-213ENST00000445064 EXOC6BQ9Y2D4 811 aa18.87■□□□□ 0.61
SEC13-213ENST00000445064 SIPA1L1O43166 1804 aa18.86■□□□□ 0.61
SEC13-213ENST00000445064 BACE1P56817 501 aa18.86■□□□□ 0.61
SEC13-213ENST00000445064 DIEXFQ68CQ4 756 aaKnown RBP18.86■□□□□ 0.61
SEC13-213ENST00000445064 UBE2Q1Q7Z7E8 422 aa18.86■□□□□ 0.61
SEC13-213ENST00000445064 MIGA1Q8NAN2 632 aa18.86■□□□□ 0.61
SEC13-213ENST00000445064 PANK1Q8TE04 598 aa18.86■□□□□ 0.61
SEC13-213ENST00000445064 ANTXR1Q9H6X2 564 aa18.86■□□□□ 0.61
SEC13-213ENST00000445064 MAST2Q6P0Q8 1798 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms