RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 ZSCAN12O43309 604 aa21.67■■□□□ 1.06
PMPCB-204ENST00000444457 YEATS4O95619 227 aa21.67■■□□□ 1.06
PMPCB-204ENST00000444457 FANCCQ00597 558 aa21.67■■□□□ 1.06
PMPCB-204ENST00000444457 STK38Q15208 465 aa21.67■■□□□ 1.06
PMPCB-204ENST00000444457 PARD6BQ9BYG5 372 aa21.67■■□□□ 1.06
PMPCB-204ENST00000444457 GJB4Q9NTQ9 266 aa21.67■■□□□ 1.06
PMPCB-204ENST00000444457 GEMIN8Q9NWZ8 242 aaKnown RBP21.67■■□□□ 1.06
PMPCB-204ENST00000444457 MRFAP1Q9Y605 127 aa21.67■■□□□ 1.06
PMPCB-204ENST00000444457 SH2B2O14492 632 aaPredicted RBP21.66■■□□□ 1.06
PMPCB-204ENST00000444457 MAP2K7O14733 419 aa21.66■■□□□ 1.06
PMPCB-204ENST00000444457 GYS2P54840 703 aa21.66■■□□□ 1.06
PMPCB-204ENST00000444457 NLRP12P59046 1061 aa21.66■■□□□ 1.06
PMPCB-204ENST00000444457 ICE2Q659A1 982 aa21.66■■□□□ 1.06
PMPCB-204ENST00000444457 KCNG4Q8TDN1 519 aa21.66■■□□□ 1.06
PMPCB-204ENST00000444457 ECM29Q5VYK3 1845 aa21.66■■□□□ 1.06
PMPCB-204ENST00000444457 IKBKBO14920 756 aa21.66■■□□□ 1.06
PMPCB-204ENST00000444457 PPP2R3AQ06190 1150 aa21.66■■□□□ 1.06
PMPCB-204ENST00000444457 JAKMIP3Q5VZ66 844 aa21.66■■□□□ 1.06
PMPCB-204ENST00000444457 ROBO1Q9Y6N7 1651 aa21.65■■□□□ 1.06
PMPCB-204ENST00000444457 KIF28PB7ZC32 967 aa21.65■■□□□ 1.06
PMPCB-204ENST00000444457 IVLP07476 585 aa21.65■■□□□ 1.06
PMPCB-204ENST00000444457 NDUFA8P51970 172 aa21.65■■□□□ 1.06
PMPCB-204ENST00000444457 KIF23Q02241 960 aaPredicted RBP21.65■■□□□ 1.06
PMPCB-204ENST00000444457 GOLGA6L1Q8N7Z2 621 aa21.65■■□□□ 1.06
PMPCB-204ENST00000444457 AIDAQ96BJ3 306 aa21.65■■□□□ 1.06
PMPCB-204ENST00000444457 STRBPQ96SI9 672 aaKnown RBP21.65■■□□□ 1.06
PMPCB-204ENST00000444457 UTP14AQ9BVJ6 771 aaKnown RBP21.65■■□□□ 1.06
PMPCB-204ENST00000444457 A0A1B0GVL5 298 aa21.65■■□□□ 1.06
PMPCB-204ENST00000444457 CCDC151A5D8V7 595 aa21.65■■□□□ 1.06
PMPCB-204ENST00000444457 SLC5A1P13866 664 aa21.65■■□□□ 1.06
PMPCB-204ENST00000444457 METAP2P50579 478 aaKnown RBP eCLIP21.65■■□□□ 1.06
PMPCB-204ENST00000444457 EIF5P55010 431 aaKnown RBP21.65■■□□□ 1.06
PMPCB-204ENST00000444457 SF3A1Q15459 793 aaKnown RBP21.65■■□□□ 1.06
PMPCB-204ENST00000444457 PHLPP1O60346 1717 aa21.65■■□□□ 1.06
PMPCB-204ENST00000444457 COL22A1Q8NFW1 1626 aaPredicted RBP21.64■■□□□ 1.06
PMPCB-204ENST00000444457 B4E1Z4 1266 aa21.64■■□□□ 1.05
PMPCB-204ENST00000444457 SPTLC2O15270 562 aa21.64■■□□□ 1.05
PMPCB-204ENST00000444457 LONRF2Q1L5Z9 754 aa21.64■■□□□ 1.05
PMPCB-204ENST00000444457 SUSD4Q5VX71 490 aa21.64■■□□□ 1.05
PMPCB-204ENST00000444457 SPATA5Q8NB90 893 aa21.64■■□□□ 1.05
PMPCB-204ENST00000444457 ZFP91Q96JP5 570 aaPredicted RBP21.64■■□□□ 1.05
PMPCB-204ENST00000444457 HSD3B7Q9H2F3 369 aa21.64■■□□□ 1.05
PMPCB-204ENST00000444457 RPS6KA5O75582 802 aa21.63■■□□□ 1.05
PMPCB-204ENST00000444457 ALX1Q15699 326 aa21.63■■□□□ 1.05
PMPCB-204ENST00000444457 APOA5Q6Q788 366 aa21.63■■□□□ 1.05
PMPCB-204ENST00000444457 PPP2R2CQ9Y2T4 447 aa21.63■■□□□ 1.05
PMPCB-204ENST00000444457 GTF2A1P52655 376 aaPredicted RBP21.63■■□□□ 1.05
PMPCB-204ENST00000444457 GNL2Q13823 731 aaKnown RBP21.63■■□□□ 1.05
PMPCB-204ENST00000444457 RASGRF1Q13972 1273 aa21.63■■□□□ 1.05
PMPCB-204ENST00000444457 TMEM87BQ96K49 555 aa21.63■■□□□ 1.05
PMPCB-204ENST00000444457 GOLGA6L9A6NEM1 432 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 ARHGAP6O43182 974 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 LMOD1P29536 600 aaPredicted RBP21.62■■□□□ 1.05
PMPCB-204ENST00000444457 BRD3Q15059 726 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 NOM1Q5C9Z4 860 aaKnown RBP21.62■■□□□ 1.05
PMPCB-204ENST00000444457 LEKR1Q6ZMV7 388 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 SYNE3Q6ZMZ3 975 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 TMEM139Q8IV31 216 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 GOLGA1Q92805 767 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 CDKL5O76039 1030 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 INTS5Q6P9B9 1019 aaKnown RBP21.62■■□□□ 1.05
PMPCB-204ENST00000444457 WDR24Q96S15 920 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 SENP2Q9HC62 589 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 EPB41L4AQ9HCS5 686 aaPredicted RBP21.62■■□□□ 1.05
PMPCB-204ENST00000444457 BRMS1Q9HCU9 246 aa21.62■■□□□ 1.05
PMPCB-204ENST00000444457 CBFA2T2O43439 604 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 SLC3A2P08195 630 aaKnown RBP21.61■■□□□ 1.05
PMPCB-204ENST00000444457 ATP1A3P13637 1013 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 RXRAP19793 462 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 TXLNAP40222 546 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 ANO1Q5XXA6 986 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 MAGEB6Q8N7X4 407 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 ZBTB9Q96C00 473 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 ALG1Q9BT22 464 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 CCDC87Q9NVE4 849 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 TIAM2Q8IVF5 1701 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 PATL2C9JE40 543 aaKnown RBP21.61■■□□□ 1.05
PMPCB-204ENST00000444457 SNAP23O00161 211 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 CDC27P30260 824 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 MAGEA9P43362 315 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 MAP3K12Q12852 859 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 VSTM4Q8IW00 320 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 MSL3Q8N5Y2 521 aaKnown RBP21.61■■□□□ 1.05
PMPCB-204ENST00000444457 IGDCC4Q8TDY8 1250 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 KIFC2Q96AC6 838 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 AIFM3Q96NN9 605 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 SEC31BQ9NQW1 1179 aa21.61■■□□□ 1.05
PMPCB-204ENST00000444457 MBD4O95243 580 aa21.6■■□□□ 1.05
PMPCB-204ENST00000444457 MICU3Q86XE3 530 aa21.6■■□□□ 1.05
PMPCB-204ENST00000444457 IFNL3Q8IZI9 196 aa21.6■■□□□ 1.05
PMPCB-204ENST00000444457 LAMB2P55268 1798 aa21.6■■□□□ 1.05
PMPCB-204ENST00000444457 RREB1Q92766 1687 aa21.6■■□□□ 1.05
PMPCB-204ENST00000444457 BIN1O00499 593 aa21.6■■□□□ 1.05
PMPCB-204ENST00000444457 CRKLP46109 303 aaKnown RBP21.6■■□□□ 1.05
PMPCB-204ENST00000444457 UBASH3AP57075 661 aa21.6■■□□□ 1.05
PMPCB-204ENST00000444457 GNG11P61952 73 aa21.6■■□□□ 1.05
PMPCB-204ENST00000444457 CPLX2Q6PUV4 134 aaKnown RBP21.6■■□□□ 1.05
PMPCB-204ENST00000444457 SGMS1Q86VZ5 419 aa21.6■■□□□ 1.05
PMPCB-204ENST00000444457 HNRNPLLQ8WVV9 542 aaKnown RBP21.6■■□□□ 1.05
PMPCB-204ENST00000444457 NAPBQ9H115 298 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms