RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 LTBP3Q9NS15 1303 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 ERICH2A1L162 156 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 IFIT3O14879 490 aaKnown RBP11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 RASSF7Q02833 373 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 FOCADQ5VW36 1801 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 KLF18A0A0U1RQI7 1052 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 GOLGA8BA8MQT2 603 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 SH2B2O14492 632 aaPredicted RBP11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 ORC4O43929 436 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 NUCB2P80303 420 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 CXCL9Q07325 125 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 ST3GAL1Q11201 340 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 NFXL1Q6ZNB6 911 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 ZNF274Q96GC6 653 aaPredicted RBP11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 HDAC9Q9UKV0 1011 aa11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
SMPD4P1-203ENST00000443839 MYH1P12882 1939 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 ROBO3Q96MS0 1386 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 PFKFB2O60825 505 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 WDHD1O75717 1129 aaPredicted RBP11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 FGRP09769 529 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 PDIA3P30101 505 aaKnown RBP11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 PLCD1P51178 756 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 EVCP57679 992 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 CFAP100Q494V2 611 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 CIAPIN1Q6FI81 312 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 IQCA1Q86XH1 822 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 IGDCC4Q8TDY8 1250 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 MKNK2Q9HBH9 465 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 ZNF287Q9HBT7 754 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 PCDHAC2Q9Y5I4 1007 aa11.16□□□□□ -0.62
SMPD4P1-203ENST00000443839 CCT2P78371 535 aaKnown RBP11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 SCRN1Q12765 414 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 WTAPQ15007 396 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 TNIP1Q15025 636 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 AGBL3Q8NEM8 1001 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 CHMP4CQ96CF2 233 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 DYNLL2Q96FJ2 89 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 LY9Q9HBG7 655 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 DDX4Q9NQI0 724 aaKnown RBP11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 BRPF3Q9ULD4 1205 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 DDX60LQ5H9U9 1706 aaKnown RBP11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 ECM29Q5VYK3 1845 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 CCDC69A6NI79 296 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 TSPY2A6NKD2 308 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 GJB2P29033 226 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 LIFRP42702 1097 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 RAB3GAP1Q15042 981 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 ARHGAP27Q6ZUM4 889 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 TTC6Q86TZ1 520 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 GMLQ99445 158 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 SYT17Q9BSW7 474 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 MTA3Q9BTC8 594 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 SLC12A7Q9Y666 1083 aa11.15□□□□□ -0.62
SMPD4P1-203ENST00000443839 TNKSO95271 1327 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 DHX16O60231 1041 aaKnown RBP11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 DTNBO60941 627 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 NT5C2P49902 561 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 CACNB3P54284 484 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 NFIAQ12857 509 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 PKP1Q13835 747 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 DLGAP5Q15398 846 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 SYNE3Q6ZMZ3 975 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 SGMS1Q86VZ5 419 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 TMTC2Q8N394 836 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 ZSCAN10Q96SZ4 725 aaPredicted RBP11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 OSBPL5Q9H0X9 879 aaPredicted RBP11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 TDRD3Q9H7E2 651 aaKnown RBP11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 SENP2Q9HC62 589 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 NCOA5Q9HCD5 579 aaKnown RBP11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 EIF6P56537 245 aaKnown RBP11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 TCP10Q12799 353 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 FAM47AQ5JRC9 791 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 APOA5Q6Q788 366 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 MICU3Q86XE3 530 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 RAB11FIP4Q86YS3 637 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 ZNF444Q8N0Y2 327 aaPredicted RBP11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 SLC44A5Q8NCS7 719 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 PRMT6Q96LA8 375 aaPredicted RBP11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 TMOD2Q9NZR1 351 aa11.14□□□□□ -0.63
SMPD4P1-203ENST00000443839 SPDYE2BA6NHP3 402 aa11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 CPLX1O14810 134 aa11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 ZBTB43O43298 467 aa11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 HLA-DOAP06340 250 aa11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 SPDYE6P0CI01 402 aa11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 METAP2P50579 478 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 TFAP4Q01664 338 aa11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 IFIT1BQ5T764 474 aaKnown RBP11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 ZSCAN29Q8IWY8 852 aaPredicted RBP11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 ENAHQ8N8S7 591 aaPredicted RBP11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 TNPO1Q92973 898 aaKnown RBP11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 LLPHQ9BRT6 129 aaKnown RBP11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 IDI2Q9BXS1 227 aa11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 HPS5Q9UPZ3 1129 aa11.13□□□□□ -0.63
SMPD4P1-203ENST00000443839 JAK2O60674 1132 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 TSPY3P0CV98 308 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 TSPY8P0CW00 308 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms