RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 ERICH6Q7L0X2 663 aa10.31□□□□□ -0.76
TOP3B-209ENST00000442653 SPATA5Q8NB90 893 aa10.31□□□□□ -0.76
TOP3B-209ENST00000442653 SLAIN1Q8ND83 568 aa10.31□□□□□ -0.76
TOP3B-209ENST00000442653 NKX2-3Q8TAU0 364 aa10.31□□□□□ -0.76
TOP3B-209ENST00000442653 SMCR8Q8TEV9 937 aaPredicted RBP10.31□□□□□ -0.76
TOP3B-209ENST00000442653 U2AF1L4Q8WU68 220 aaKnown RBP10.31□□□□□ -0.76
TOP3B-209ENST00000442653 ARHGAP45Q92619 1136 aa10.31□□□□□ -0.76
TOP3B-209ENST00000442653 DPF3Q92784 378 aa10.31□□□□□ -0.76
TOP3B-209ENST00000442653 NSUN4Q96CB9 384 aaKnown RBP10.31□□□□□ -0.76
TOP3B-209ENST00000442653 NEUROD6Q96NK8 337 aa10.31□□□□□ -0.76
TOP3B-209ENST00000442653 DOCK3Q8IZD9 2030 aa10.3□□□□□ -0.76
TOP3B-209ENST00000442653 PNMA6EA0A0J9YXQ4 647 aa10.3□□□□□ -0.76
TOP3B-209ENST00000442653 TNPO2O14787 897 aaKnown RBP10.3□□□□□ -0.76
TOP3B-209ENST00000442653 ADCY3O60266 1144 aa10.3□□□□□ -0.76
TOP3B-209ENST00000442653 TBC1D12O60347 775 aa10.3□□□□□ -0.76
TOP3B-209ENST00000442653 INHAP05111 366 aa10.3□□□□□ -0.76
TOP3B-209ENST00000442653 ARID4AP29374 1257 aaPredicted RBP10.3□□□□□ -0.76
TOP3B-209ENST00000442653 MCAMP43121 646 aa10.3□□□□□ -0.76
TOP3B-209ENST00000442653 SPP2Q13103 211 aa10.3□□□□□ -0.76
TOP3B-209ENST00000442653 ANKRD13CQ8N6S4 541 aa10.3□□□□□ -0.76
TOP3B-209ENST00000442653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.3□□□□□ -0.76
TOP3B-209ENST00000442653 RBM27Q9P2N5 1060 aaKnown RBP10.3□□□□□ -0.76
TOP3B-209ENST00000442653 AGTPBP1Q9UPW5 1226 aa10.3□□□□□ -0.76
TOP3B-209ENST00000442653 COL2A1P02458 1487 aaPredicted RBP10.3□□□□□ -0.76
TOP3B-209ENST00000442653 LOC285556D6RIA3 1793 aa10.29□□□□□ -0.76
TOP3B-209ENST00000442653 FARP2O94887 1054 aaPredicted RBP10.29□□□□□ -0.76
TOP3B-209ENST00000442653 UBXN2AP68543 259 aa10.29□□□□□ -0.76
TOP3B-209ENST00000442653 IRF5Q13568 498 aa10.29□□□□□ -0.76
TOP3B-209ENST00000442653 OSBPL5Q9H0X9 879 aaPredicted RBP10.29□□□□□ -0.76
TOP3B-209ENST00000442653 PRO3102Q9H379 93 aa10.29□□□□□ -0.76
TOP3B-209ENST00000442653 RAI14Q9P0K7 980 aa10.29□□□□□ -0.76
TOP3B-209ENST00000442653 SIPA1L1O43166 1804 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 ATAD5Q96QE3 1844 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 BCAR3O75815 825 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 SGPL1O95470 568 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 GNAI2P04899 355 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 HMGCS2P54868 508 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 GSTO1P78417 241 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 JAG1P78504 1218 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 FAM110CQ1W6H9 321 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 GORABQ5T7V8 394 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 ATF7IPQ6VMQ6 1270 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 ADGRA1Q86SQ6 560 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 PROCA1Q8NCQ7 364 aaPredicted RBP10.28□□□□□ -0.76
TOP3B-209ENST00000442653 ZNF280CQ8ND82 737 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 PXYLP1Q8TE99 480 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 SH3RF3Q8TEJ3 882 aaPredicted RBP10.28□□□□□ -0.76
TOP3B-209ENST00000442653 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 DEFB118Q96PH6 123 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 PAK6Q9NQU5 681 aaPredicted RBP10.28□□□□□ -0.76
TOP3B-209ENST00000442653 SNRKQ9NRH2 765 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 TAOK2Q9UL54 1235 aa10.28□□□□□ -0.76
TOP3B-209ENST00000442653 ZBTB7BO15156 539 aaPredicted RBP10.27□□□□□ -0.77
TOP3B-209ENST00000442653 MAP4K4O95819 1239 aaPredicted RBP10.27□□□□□ -0.77
TOP3B-209ENST00000442653 LDHCP07864 332 aa10.27□□□□□ -0.77
TOP3B-209ENST00000442653 CAP2P40123 477 aa10.27□□□□□ -0.77
TOP3B-209ENST00000442653 SHROOM1Q2M3G4 852 aaPredicted RBP10.27□□□□□ -0.77
TOP3B-209ENST00000442653 TEX11Q8IYF3 940 aa10.27□□□□□ -0.77
TOP3B-209ENST00000442653 FRAT1Q92837 279 aaPredicted RBP10.27□□□□□ -0.77
TOP3B-209ENST00000442653 HTATIP2Q9BUP3 242 aa10.27□□□□□ -0.77
TOP3B-209ENST00000442653 ASCC2Q9H1I8 757 aaPredicted RBP10.27□□□□□ -0.77
TOP3B-209ENST00000442653 DNAJC18Q9H819 358 aa10.27□□□□□ -0.77
TOP3B-209ENST00000442653 LRP2BPQ9P2M1 347 aa10.27□□□□□ -0.77
TOP3B-209ENST00000442653 PNMA3Q9UL41 463 aa10.27□□□□□ -0.77
TOP3B-209ENST00000442653 MAST2Q6P0Q8 1798 aa10.26□□□□□ -0.77
TOP3B-209ENST00000442653 IPO8O15397 1037 aaKnown RBP10.26□□□□□ -0.77
TOP3B-209ENST00000442653 PEX10O60683 326 aa10.26□□□□□ -0.77
TOP3B-209ENST00000442653 G3BP1Q13283 466 aaKnown RBP eCLIP10.26□□□□□ -0.77
TOP3B-209ENST00000442653 COA7Q96BR5 231 aa10.26□□□□□ -0.77
TOP3B-209ENST00000442653 DBNDD2Q9BQY9 259 aa10.26□□□□□ -0.77
TOP3B-209ENST00000442653 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
TOP3B-209ENST00000442653 AATFQ9NY61 560 aaKnown RBP eCLIP10.26□□□□□ -0.77
TOP3B-209ENST00000442653 CDK5RAP2Q96SN8 1893 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 USP17L5A8MUK1 530 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 CCER2I3L3R5 266 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 TFRCP02786 760 aaKnown RBP10.25□□□□□ -0.77
TOP3B-209ENST00000442653 CYP2E1P05181 493 aaPredicted RBP10.25□□□□□ -0.77
TOP3B-209ENST00000442653 UQCRFS1P1P0C7P4 283 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 GCLCP48506 637 aaPredicted RBP10.25□□□□□ -0.77
TOP3B-209ENST00000442653 TRIM32Q13049 653 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 MTMR2Q13614 643 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 TNNI3KQ59H18 835 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 SH3D19Q5HYK7 790 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 NAA16Q6N069 864 aaPredicted RBP10.25□□□□□ -0.77
TOP3B-209ENST00000442653 MAPKAPK5Q8IW41 473 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 TMEM57Q8N5G2 664 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 DIS3LQ8TF46 1054 aaKnown RBP10.25□□□□□ -0.77
TOP3B-209ENST00000442653 TGFBRAP1Q8WUH2 860 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 PI4KBQ9UBF8 816 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 HERC5Q9UII4 1024 aaKnown RBP10.25□□□□□ -0.77
TOP3B-209ENST00000442653 GJD2Q9UKL4 321 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 NR2E3Q9Y5X4 410 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 FPGT-TNNI3KV9GXZ4 949 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 FLT1P17948 1338 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 MYO5AQ9Y4I1 1855 aaKnown RBP10.25□□□□□ -0.77
TOP3B-209ENST00000442653 ALPK3Q96L96 1907 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 CUL9Q8IWT3 2517 aa10.25□□□□□ -0.77
TOP3B-209ENST00000442653 PLXNB2O15031 1838 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 EVI5O60447 810 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 HMGCRP04035 888 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms