RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 MVPQ14764 893 aaKnown RBP6.23□□□□□ -1.41
PTPRC-209ENST00000442510 PRPF40BQ6NWY9 871 aaKnown RBP6.23□□□□□ -1.41
PTPRC-209ENST00000442510 ST13P4Q8IZP2 240 aaPredicted RBP6.23□□□□□ -1.41
PTPRC-209ENST00000442510 RABGGTAQ92696 567 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 KIF1BPQ96EK5 621 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 NLRP4Q96MN2 994 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 RIOK1Q9BRS2 568 aaKnown RBP6.23□□□□□ -1.41
PTPRC-209ENST00000442510 ZMYM3Q14202 1370 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 GOLGA8CPA6NN73 597 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 GOLGA8KD6RF30 607 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 KRT10P13645 584 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 PMS2P54278 862 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 HDLBPQ00341 1268 aaKnown RBP6.23□□□□□ -1.41
PTPRC-209ENST00000442510 TAF7Q15545 349 aaPredicted RBP6.23□□□□□ -1.41
PTPRC-209ENST00000442510 CCDC153Q494R4 210 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 PREPLQ4J6C6 727 aaPredicted RBP6.23□□□□□ -1.41
PTPRC-209ENST00000442510 CCDC125Q86Z20 511 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 SUN5Q8TC36 379 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 CDHR1Q96JP9 859 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 DDX19AQ9NUU7 478 aaKnown RBP6.23□□□□□ -1.41
PTPRC-209ENST00000442510 TRPC6Q9Y210 931 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 SH3GLB1Q9Y371 365 aa6.23□□□□□ -1.41
PTPRC-209ENST00000442510 TMOD1P28289 359 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 G3BP1Q13283 466 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 NEK10Q6ZWH5 1172 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 DHX36Q9H2U1 1008 aaKnown RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 GALNT8Q9NY28 637 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 CCDC7Q96M83 1385 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 RAPGEF3O95398 923 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 APOBRQ0VD83 1088 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 TBC1D10BQ4KMP7 808 aaPredicted RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 MAP3K21Q5TCX8 1036 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 INTS8Q75QN2 995 aaKnown RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 CKAP2LQ8IYA6 745 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 NSMCE1Q8WV22 266 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 MAML3Q96JK9 1138 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 DNAAF2Q9NVR5 837 aaKnown RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 EURLQ9NYK6 297 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 ZFATQ9P243 1243 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 MYO1AQ9UBC5 1043 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 ZBTB21Q9ULJ3 1066 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 EVC2Q86UK5 1308 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 FHAD1B1AJZ9 1412 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 NBPF26B4DH59 902 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 C21orf2O43822 256 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 RAB11FIP3O75154 756 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 CHGBP05060 677 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 KRT20P35900 424 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 STAT2P52630 851 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 OLR1P78380 273 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 AIMP1Q12904 312 aaKnown RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 PARP10Q53GL7 1025 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 NBPF15Q8N660 670 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 FTOQ9C0B1 505 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 IFT122Q9HBG6 1241 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 GDPD2Q9HCC8 539 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 DDX19BQ9UMR2 479 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 MTRF1O75570 445 aaKnown RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 STIP1P31948 543 aaKnown RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 MTTPP55157 894 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 POU5F1Q01860 360 aaKnown RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 NAA30Q147X3 362 aaPredicted RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 CWF19L1Q69YN2 538 aaKnown RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 DCLK2Q8N568 766 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 IQCDQ96DY2 449 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 DHTKD1Q96HY7 919 aaPredicted RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 CATSPER2Q96P56 530 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 CARD9Q9H257 536 aa6.22□□□□□ -1.41
PTPRC-209ENST00000442510 SCHIP1Q9P0W5 487 aaPredicted RBP6.22□□□□□ -1.41
PTPRC-209ENST00000442510 CNTLNQ9NXG0 1405 aa6.21□□□□□ -1.41
PTPRC-209ENST00000442510 BIN1O00499 593 aa6.21□□□□□ -1.41
PTPRC-209ENST00000442510 DKC1O60832 514 aaKnown RBP eCLIP6.21□□□□□ -1.41
PTPRC-209ENST00000442510 HSPA8P11142 646 aaKnown RBP6.21□□□□□ -1.41
PTPRC-209ENST00000442510 HARSP12081 509 aaKnown RBP6.21□□□□□ -1.41
PTPRC-209ENST00000442510 PPM1FP49593 454 aaPredicted RBP6.21□□□□□ -1.41
PTPRC-209ENST00000442510 DAB2P98082 770 aa6.21□□□□□ -1.41
PTPRC-209ENST00000442510 PRR16Q569H4 304 aa6.21□□□□□ -1.41
PTPRC-209ENST00000442510 ZSCAN25Q6NSZ9 544 aa6.21□□□□□ -1.41
PTPRC-209ENST00000442510 NEK5Q6P3R8 708 aa6.21□□□□□ -1.41
PTPRC-209ENST00000442510 CDC37L1Q7L3B6 337 aa6.21□□□□□ -1.41
PTPRC-209ENST00000442510 SLF2Q8IX21 1173 aa6.21□□□□□ -1.41
PTPRC-209ENST00000442510 RBM41Q96IZ5 413 aaKnown RBP6.21□□□□□ -1.41
PTPRC-209ENST00000442510 PPANQ9NQ55 473 aaKnown RBP6.21□□□□□ -1.41
PTPRC-209ENST00000442510 CFDP1Q9UEE9 299 aaPredicted RBP6.21□□□□□ -1.41
PTPRC-209ENST00000442510 CCPG1Q9ULG6 757 aa6.21□□□□□ -1.41
PTPRC-209ENST00000442510 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.21□□□□□ -1.42
PTPRC-209ENST00000442510 TXNDC9O14530 226 aa6.21□□□□□ -1.42
PTPRC-209ENST00000442510 MEFVO15553 781 aaPredicted RBP6.21□□□□□ -1.42
PTPRC-209ENST00000442510 TADA3O75528 432 aa6.21□□□□□ -1.42
PTPRC-209ENST00000442510 EEF2P13639 858 aaKnown RBP6.21□□□□□ -1.42
PTPRC-209ENST00000442510 IL4RP24394 825 aa6.21□□□□□ -1.42
PTPRC-209ENST00000442510 HPDP32754 393 aaPredicted RBP6.21□□□□□ -1.42
PTPRC-209ENST00000442510 GCLCP48506 637 aaPredicted RBP6.21□□□□□ -1.42
PTPRC-209ENST00000442510 ST13P50502 369 aaKnown RBP6.21□□□□□ -1.42
PTPRC-209ENST00000442510 DRP2Q13474 957 aa6.21□□□□□ -1.42
PTPRC-209ENST00000442510 PDE3AQ14432 1141 aa6.21□□□□□ -1.42
PTPRC-209ENST00000442510 ERMNQ8TAM6 284 aa6.21□□□□□ -1.42
PTPRC-209ENST00000442510 RPGRQ92834 1020 aaKnown RBP6.21□□□□□ -1.42
PTPRC-209ENST00000442510 STAMBPL1Q96FJ0 436 aa6.21□□□□□ -1.42
PTPRC-209ENST00000442510 MPHOSPH9Q99550 1183 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms