RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 PAWRQ96IZ0 340 aaKnown RBP25.29■■□□□ 1.64
TMEM50B-204ENST00000442441 MEIS3Q99687 375 aa25.29■■□□□ 1.64
TMEM50B-204ENST00000442441 MAP4K4O95819 1239 aaPredicted RBP25.28■■□□□ 1.64
TMEM50B-204ENST00000442441 GCLCP48506 637 aaPredicted RBP25.28■■□□□ 1.64
TMEM50B-204ENST00000442441 TFCP2Q12800 502 aa25.28■■□□□ 1.64
TMEM50B-204ENST00000442441 NECAB2Q7Z6G3 386 aa25.28■■□□□ 1.64
TMEM50B-204ENST00000442441 ZNF280CQ8ND82 737 aa25.28■■□□□ 1.64
TMEM50B-204ENST00000442441 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.28■■□□□ 1.64
TMEM50B-204ENST00000442441 STAP2Q9UGK3 403 aa25.28■■□□□ 1.64
TMEM50B-204ENST00000442441 PABPC4Q13310 644 aaKnown RBP eCLIP25.27■■□□□ 1.64
TMEM50B-204ENST00000442441 TBC1D2Q9BYX2 928 aa25.27■■□□□ 1.64
TMEM50B-204ENST00000442441 SOX1O00570 391 aaPredicted RBP25.26■■□□□ 1.63
TMEM50B-204ENST00000442441 LDHCP07864 332 aa25.26■■□□□ 1.63
TMEM50B-204ENST00000442441 GSTO1P78417 241 aa25.26■■□□□ 1.63
TMEM50B-204ENST00000442441 TRMT2AQ8IZ69 625 aaKnown RBP25.26■■□□□ 1.63
TMEM50B-204ENST00000442441 DIS3LQ8TF46 1054 aaKnown RBP25.26■■□□□ 1.63
TMEM50B-204ENST00000442441 HMG20BQ9P0W2 317 aa25.26■■□□□ 1.63
TMEM50B-204ENST00000442441 COL2A1P02458 1487 aaPredicted RBP25.26■■□□□ 1.63
TMEM50B-204ENST00000442441 LOC285556D6RIA3 1793 aa25.26■■□□□ 1.63
TMEM50B-204ENST00000442441 SRGAP3O43295 1099 aa25.25■■□□□ 1.63
TMEM50B-204ENST00000442441 HMGCRP04035 888 aa25.25■■□□□ 1.63
TMEM50B-204ENST00000442441 CT47B1P0C2W7 299 aaPredicted RBP25.25■■□□□ 1.63
TMEM50B-204ENST00000442441 HMGCS2P54868 508 aa25.25■■□□□ 1.63
TMEM50B-204ENST00000442441 ANKLE1Q8NAG6 615 aa25.25■■□□□ 1.63
TMEM50B-204ENST00000442441 NSUN4Q96CB9 384 aaKnown RBP25.25■■□□□ 1.63
TMEM50B-204ENST00000442441 ALPK3Q96L96 1907 aa25.24■■□□□ 1.63
TMEM50B-204ENST00000442441 CAP2P40123 477 aa25.24■■□□□ 1.63
TMEM50B-204ENST00000442441 SPATA5Q8NB90 893 aa25.24■■□□□ 1.63
TMEM50B-204ENST00000442441 NEUROD6Q96NK8 337 aa25.24■■□□□ 1.63
TMEM50B-204ENST00000442441 ASCC2Q9H1I8 757 aaPredicted RBP25.24■■□□□ 1.63
TMEM50B-204ENST00000442441 GJD2Q9UKL4 321 aa25.24■■□□□ 1.63
TMEM50B-204ENST00000442441 USP17L5A8MUK1 530 aa25.23■■□□□ 1.63
TMEM50B-204ENST00000442441 PI16Q6UXB8 463 aa25.23■■□□□ 1.63
TMEM50B-204ENST00000442441 TBC1D9Q6ZT07 1266 aa25.23■■□□□ 1.63
TMEM50B-204ENST00000442441 SLC17A8Q8NDX2 589 aa25.23■■□□□ 1.63
TMEM50B-204ENST00000442441 LRCH3Q96II8 777 aa25.23■■□□□ 1.63
TMEM50B-204ENST00000442441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.23■■□□□ 1.63
TMEM50B-204ENST00000442441 COL6A3P12111 3177 aa25.23■■□□□ 1.63
TMEM50B-204ENST00000442441 RPTORQ8N122 1335 aa25.22■■□□□ 1.63
TMEM50B-204ENST00000442441 ATAD5Q96QE3 1844 aa25.22■■□□□ 1.63
TMEM50B-204ENST00000442441 GNAI3P08754 354 aa25.22■■□□□ 1.63
TMEM50B-204ENST00000442441 MTX1Q13505 466 aa25.22■■□□□ 1.63
TMEM50B-204ENST00000442441 RRP1BQ14684 758 aaKnown RBP25.22■■□□□ 1.63
TMEM50B-204ENST00000442441 SH3D19Q5HYK7 790 aa25.22■■□□□ 1.63
TMEM50B-204ENST00000442441 HMX1Q9NP08 348 aaPredicted RBP25.22■■□□□ 1.63
TMEM50B-204ENST00000442441 RAI14Q9P0K7 980 aa25.22■■□□□ 1.63
TMEM50B-204ENST00000442441 GORABQ5T7V8 394 aa25.21■■□□□ 1.63
TMEM50B-204ENST00000442441 AS3MTQ9HBK9 375 aa25.21■■□□□ 1.63
TMEM50B-204ENST00000442441 HERC5Q9UII4 1024 aaKnown RBP25.21■■□□□ 1.63
TMEM50B-204ENST00000442441 TRIM32Q13049 653 aa25.2■■□□□ 1.62
TMEM50B-204ENST00000442441 TEX11Q8IYF3 940 aa25.2■■□□□ 1.62
TMEM50B-204ENST00000442441 C7orf61Q8IZ16 206 aa25.2■■□□□ 1.62
TMEM50B-204ENST00000442441 GDF15Q99988 308 aa25.2■■□□□ 1.62
TMEM50B-204ENST00000442441 NBPF3Q9H094 633 aa25.2■■□□□ 1.62
TMEM50B-204ENST00000442441 MORF4L1Q9UBU8 362 aa25.2■■□□□ 1.62
TMEM50B-204ENST00000442441 ARID4AP29374 1257 aaPredicted RBP25.19■■□□□ 1.62
TMEM50B-204ENST00000442441 BMP8BP34820 402 aa25.19■■□□□ 1.62
TMEM50B-204ENST00000442441 A0A0C4DFX4 3053 aa25.19■■□□□ 1.62
TMEM50B-204ENST00000442441 WDR18Q9BV38 432 aa25.18■■□□□ 1.62
TMEM50B-204ENST00000442441 PI4KBQ9UBF8 816 aa25.18■■□□□ 1.62
TMEM50B-204ENST00000442441 DLL1O00548 723 aa25.17■■□□□ 1.62
TMEM50B-204ENST00000442441 MNX1P50219 401 aaPredicted RBP25.17■■□□□ 1.62
TMEM50B-204ENST00000442441 IRX3P78415 501 aaPredicted RBP25.17■■□□□ 1.62
TMEM50B-204ENST00000442441 SH3RF3Q8TEJ3 882 aaPredicted RBP25.17■■□□□ 1.62
TMEM50B-204ENST00000442441 TRIB2Q92519 343 aa25.17■■□□□ 1.62
TMEM50B-204ENST00000442441 ARHGAP45Q92619 1136 aa25.17■■□□□ 1.62
TMEM50B-204ENST00000442441 LRP2BPQ9P2M1 347 aa25.17■■□□□ 1.62
TMEM50B-204ENST00000442441 ZMYND8Q9ULU4 1186 aaPredicted RBP25.17■■□□□ 1.62
TMEM50B-204ENST00000442441 MCAMP43121 646 aa25.16■■□□□ 1.62
TMEM50B-204ENST00000442441 BACE1P56817 501 aa25.16■■□□□ 1.62
TMEM50B-204ENST00000442441 MTMR2Q13614 643 aa25.16■■□□□ 1.62
TMEM50B-204ENST00000442441 NOL10Q9BSC4 688 aaKnown RBP25.16■■□□□ 1.62
TMEM50B-204ENST00000442441 DHX36Q9H2U1 1008 aaKnown RBP25.16■■□□□ 1.62
TMEM50B-204ENST00000442441 C11orf49Q9H6J7 331 aa25.16■■□□□ 1.62
TMEM50B-204ENST00000442441 OGDHLQ9ULD0 1010 aa25.16■■□□□ 1.62
TMEM50B-204ENST00000442441 PLXNB2O15031 1838 aa25.16■■□□□ 1.62
TMEM50B-204ENST00000442441 ASNSP08243 561 aa25.15■■□□□ 1.62
TMEM50B-204ENST00000442441 UQCRFS1P1P0C7P4 283 aa25.15■■□□□ 1.62
TMEM50B-204ENST00000442441 CYP2B6P20813 491 aa25.15■■□□□ 1.62
TMEM50B-204ENST00000442441 HOXA7P31268 230 aaPredicted RBP25.15■■□□□ 1.62
TMEM50B-204ENST00000442441 RARSP54136 660 aaKnown RBP25.15■■□□□ 1.62
TMEM50B-204ENST00000442441 P2RX7Q99572 595 aaKnown RBP25.15■■□□□ 1.62
TMEM50B-204ENST00000442441 TMOD4Q9NZQ9 345 aa25.15■■□□□ 1.62
TMEM50B-204ENST00000442441 DDX60LQ5H9U9 1706 aaKnown RBP25.15■■□□□ 1.62
TMEM50B-204ENST00000442441 MAP3K21Q5TCX8 1036 aa25.14■■□□□ 1.62
TMEM50B-204ENST00000442441 GPR153Q6NV75 609 aa25.14■■□□□ 1.62
TMEM50B-204ENST00000442441 BAG3O95817 575 aa25.13■■□□□ 1.61
TMEM50B-204ENST00000442441 XRCC5P13010 732 aaKnown RBP25.13■■□□□ 1.61
TMEM50B-204ENST00000442441 PRKAR2AP13861 404 aaKnown RBP25.13■■□□□ 1.61
TMEM50B-204ENST00000442441 G3BP1Q13283 466 aaKnown RBP eCLIP25.13■■□□□ 1.61
TMEM50B-204ENST00000442441 GPRC5AQ8NFJ5 357 aa25.13■■□□□ 1.61
TMEM50B-204ENST00000442441 SOCS4Q8WXH5 440 aa25.13■■□□□ 1.61
TMEM50B-204ENST00000442441 NUDT12Q9BQG2 462 aa25.13■■□□□ 1.61
TMEM50B-204ENST00000442441 AATFQ9NY61 560 aaKnown RBP eCLIP25.13■■□□□ 1.61
TMEM50B-204ENST00000442441 SIPA1L1O43166 1804 aa25.13■■□□□ 1.61
TMEM50B-204ENST00000442441 C19orf81C9J6K1 198 aa25.12■■□□□ 1.61
TMEM50B-204ENST00000442441 PEX10O60683 326 aa25.12■■□□□ 1.61
TMEM50B-204ENST00000442441 PLCG2P16885 1265 aa25.12■■□□□ 1.61
TMEM50B-204ENST00000442441 SYN1P17600 705 aa25.12■■□□□ 1.61
TMEM50B-204ENST00000442441 HERVK_113P62684 666 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms