RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 BAG1Q99933 345 aaPredicted RBP12.95□□□□□ -0.34
CCBE1-202ENST00000439986 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
CCBE1-202ENST00000439986 TTC6Q86TZ1 520 aa12.95□□□□□ -0.34
CCBE1-202ENST00000439986 EFHD2Q96C19 240 aaPredicted RBP12.95□□□□□ -0.34
CCBE1-202ENST00000439986 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
CCBE1-202ENST00000439986 TBC1D31Q96DN5 1066 aa12.95□□□□□ -0.34
CCBE1-202ENST00000439986 PPARDQ03181 441 aa12.95□□□□□ -0.34
CCBE1-202ENST00000439986 PTH1RQ03431 593 aa12.95□□□□□ -0.34
CCBE1-202ENST00000439986 CUL4AQ13619 759 aa12.95□□□□□ -0.34
CCBE1-202ENST00000439986 EHBP1Q8NDI1 1231 aa12.95□□□□□ -0.34
CCBE1-202ENST00000439986 ATP7AQ04656 1500 aa12.95□□□□□ -0.34
CCBE1-202ENST00000439986 CCDC160A6NGH7 325 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 RXRAP19793 462 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 SSH3Q8TE77 659 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 LLPHQ9BRT6 129 aaKnown RBP12.94□□□□□ -0.34
CCBE1-202ENST00000439986 CARD6Q9BX69 1037 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 OSBPL3Q9H4L5 887 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 BIRC3Q13489 604 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 DHX58Q96C10 678 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 CREB3O43889 395 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 RHOXF2BP0C7M4 288 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 STX17P56962 302 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 PSMC1P62191 440 aaKnown RBP12.94□□□□□ -0.34
CCBE1-202ENST00000439986 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 RHOXF2Q9BQY4 288 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 NR1I2O75469 434 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 FANCCQ00597 558 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 SPAG1Q07617 926 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 ZNF569Q5MCW4 686 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 UNC5CLQ8IV45 518 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 NAPAP54920 295 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 OTUD7BQ6GQQ9 843 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 MIGA1Q8NAN2 632 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 FERMT1Q9BQL6 677 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 ZNF215Q9UL58 517 aaPredicted RBP12.94□□□□□ -0.34
CCBE1-202ENST00000439986 POGZQ7Z3K3 1410 aa12.94□□□□□ -0.34
CCBE1-202ENST00000439986 TTC37Q6PGP7 1564 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 FAM135BQ49AJ0 1406 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 AKR1B10O60218 316 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 HOXC9P31274 260 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 PPP2R3AQ06190 1150 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 SLC9C2Q5TAH2 1124 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 UHRF1BP1LA0JNW5 1464 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 IMPACTQ9P2X3 320 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 ELP1O95163 1332 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 TPCN1Q9ULQ1 816 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 CKAP4Q07065 602 aaKnown RBP12.93□□□□□ -0.34
CCBE1-202ENST00000439986 PDE1CQ14123 709 aaPredicted RBP12.93□□□□□ -0.34
CCBE1-202ENST00000439986 RTN1Q16799 776 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 CFAP58Q5T655 872 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 RAB3IL1Q8TBN0 382 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 MRFAP1Q9Y605 127 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 ASIC1P78348 528 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 FBF1Q8TES7 1133 aa12.93□□□□□ -0.34
CCBE1-202ENST00000439986 PYM1Q9BRP8 204 aaKnown RBP12.93□□□□□ -0.34
CCBE1-202ENST00000439986 MRPL28Q13084 256 aaKnown RBP12.92□□□□□ -0.34
CCBE1-202ENST00000439986 BABAM1Q9NWV8 329 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 DNAJC21Q5F1R6 531 aaKnown RBP12.92□□□□□ -0.34
CCBE1-202ENST00000439986 SPECC1LQ69YQ0 1117 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 CCDC110Q8TBZ0 833 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 DBNDD2Q9BQY9 259 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 RABL2BQ9UNT1 228 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 CHGBP05060 677 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 MCM7P33993 719 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 ANO1Q5XXA6 986 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 SPAG5Q96R06 1193 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 EVLQ9UI08 416 aaPredicted RBP12.92□□□□□ -0.34
CCBE1-202ENST00000439986 NDC80O14777 642 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 CCDC155Q8N6L0 562 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 KIAA1524Q8TCG1 905 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 NDUFB9Q9Y6M9 179 aa12.92□□□□□ -0.34
CCBE1-202ENST00000439986 FLOT2Q14254 428 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 TNNI3KQ59H18 835 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 C6orf163Q5TEZ5 329 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 DDX21Q9NR30 783 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCBE1-202ENST00000439986 SAP30BPQ9UHR5 308 aaKnown RBP12.91□□□□□ -0.34
CCBE1-202ENST00000439986 FPGT-TNNI3KV9GXZ4 949 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 GSTO1P78417 241 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 KIF5AQ12840 1032 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 FOXD4Q12950 439 aaPredicted RBP12.91□□□□□ -0.34
CCBE1-202ENST00000439986 RMND1Q9NWS8 449 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 STAP2Q9UGK3 403 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 CCDC85CA6NKD9 419 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 IPO5O00410 1097 aaKnown RBP12.91□□□□□ -0.34
CCBE1-202ENST00000439986 FAM13AO94988 1023 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 LDHCP07864 332 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 CYLC1P35663 651 aaPredicted RBP12.91□□□□□ -0.34
CCBE1-202ENST00000439986 SETDB1Q15047 1291 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 HELBQ8NG08 1087 aaPredicted RBP12.91□□□□□ -0.34
CCBE1-202ENST00000439986 KRT23Q9C075 422 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 XPO4Q9C0E2 1151 aaKnown RBP12.91□□□□□ -0.34
CCBE1-202ENST00000439986 HELLSQ9NRZ9 838 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 TRIM75PA6NK02 468 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 HARSP12081 509 aaKnown RBP12.91□□□□□ -0.34
CCBE1-202ENST00000439986 CCDC25Q86WR0 208 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 C8orf37Q96NL8 207 aa12.91□□□□□ -0.34
CCBE1-202ENST00000439986 ZKSCAN3Q9BRR0 538 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms