RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	API5	Q9BZZ5	524 aa	Known RBP	20.11	■□□□□ 0.81
LAMB1-205	ENST00000439976	HMG20B	Q9P0W2	317 aa		20.11	■□□□□ 0.81
LAMB1-205	ENST00000439976		A0A1W2PPC1	479 aa		20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	EVI5	O60447	810 aa		20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	CAPN2	P17655	700 aa		20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	SPP2	Q13103	211 aa		20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	MTX1	Q13505	466 aa		20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	MVP	Q14764	893 aa	Known RBP	20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	DIS3L	Q8TF46	1054 aa	Known RBP	20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	COA7	Q96BR5	231 aa		20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	PAWR	Q96IZ0	340 aa	Known RBP	20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	OSBPL5	Q9H0X9	879 aa	Predicted RBP	20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	GJD2	Q9UKL4	321 aa		20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	HDAC5	Q9UQL6	1122 aa		20.1	■□□□□ 0.81
LAMB1-205	ENST00000439976	PLXNB2	O15031	1838 aa		20.09	■□□□□ 0.81
LAMB1-205	ENST00000439976	SIPA1L1	O43166	1804 aa		20.09	■□□□□ 0.81
LAMB1-205	ENST00000439976	CT47B1	P0C2W7	299 aa	Predicted RBP	20.09	■□□□□ 0.81
LAMB1-205	ENST00000439976	TBC1D9	Q6ZT07	1266 aa		20.09	■□□□□ 0.81
LAMB1-205	ENST00000439976	ZNF280C	Q8ND82	737 aa		20.09	■□□□□ 0.81
LAMB1-205	ENST00000439976	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	20.09	■□□□□ 0.81	2e-15	■■□□□ 12.1
LAMB1-205	ENST00000439976	PNMA3	Q9UL41	463 aa		20.09	■□□□□ 0.81
LAMB1-205	ENST00000439976	TAOK2	Q9UL54	1235 aa		20.09	■□□□□ 0.81
LAMB1-205	ENST00000439976	AKAP2	Q9Y2D5	859 aa		20.09	■□□□□ 0.81
LAMB1-205	ENST00000439976	SRGAP3	O43295	1099 aa		20.08	■□□□□ 0.81
LAMB1-205	ENST00000439976	CAP2	P40123	477 aa		20.08	■□□□□ 0.81
LAMB1-205	ENST00000439976	MNX1	P50219	401 aa	Predicted RBP	20.08	■□□□□ 0.81
LAMB1-205	ENST00000439976	HMGCS2	P54868	508 aa		20.08	■□□□□ 0.81
LAMB1-205	ENST00000439976	STAP2	Q9UGK3	403 aa		20.08	■□□□□ 0.81
LAMB1-205	ENST00000439976	MAP4K4	O95819	1239 aa	Predicted RBP	20.07	■□□□□ 0.8
LAMB1-205	ENST00000439976	GCLC	P48506	637 aa	Predicted RBP	20.07	■□□□□ 0.8
LAMB1-205	ENST00000439976	TRIM32	Q13049	653 aa		20.07	■□□□□ 0.8
LAMB1-205	ENST00000439976	SH3D19	Q5HYK7	790 aa		20.07	■□□□□ 0.8
LAMB1-205	ENST00000439976	SPATA5	Q8NB90	893 aa		20.07	■□□□□ 0.8
LAMB1-205	ENST00000439976	LRCH3	Q96II8	777 aa		20.07	■□□□□ 0.8
LAMB1-205	ENST00000439976	ASCC2	Q9H1I8	757 aa	Predicted RBP	20.07	■□□□□ 0.8
LAMB1-205	ENST00000439976	ARID4A	P29374	1257 aa	Predicted RBP	20.06	■□□□□ 0.8
LAMB1-205	ENST00000439976	USP17L5	A8MUK1	530 aa		20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976	HMGCR	P04035	888 aa		20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976	MCAM	P43121	646 aa		20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976	RARS	P54136	660 aa	Known RBP	20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976	JAG1	P78504	1218 aa		20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976	NECAB2	Q7Z6G3	386 aa		20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976	NEUROD6	Q96NK8	337 aa		20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976	GDF15	Q99988	308 aa		20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976	TBC1D2	Q9BYX2	928 aa		20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976	MORF4L1	Q9UBU8	362 aa		20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976		A0A0C4DFX4	3053 aa		20.05	■□□□□ 0.8
LAMB1-205	ENST00000439976	LDHC	P07864	332 aa		20.04	■□□□□ 0.8
LAMB1-205	ENST00000439976	GSTO1	P78417	241 aa		20.04	■□□□□ 0.8
LAMB1-205	ENST00000439976	ANKLE1	Q8NAG6	615 aa		20.04	■□□□□ 0.8
LAMB1-205	ENST00000439976	DDX60L	Q5H9U9	1706 aa	Known RBP	20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	PEX10	O60683	326 aa		20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	GNAI3	P08754	354 aa		20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	TEX11	Q8IYF3	940 aa		20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	TRIB2	Q92519	343 aa		20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	ARHGAP45	Q92619	1136 aa		20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	DNAJC18	Q9H819	358 aa		20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	RAI14	Q9P0K7	980 aa		20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	HERC5	Q9UII4	1024 aa	Known RBP	20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	CDK5RAP2	Q96SN8	1893 aa		20.03	■□□□□ 0.8
LAMB1-205	ENST00000439976	RPTOR	Q8N122	1335 aa		20.02	■□□□□ 0.8
LAMB1-205	ENST00000439976	BMP8B	P34820	402 aa		20.02	■□□□□ 0.8
LAMB1-205	ENST00000439976	PABPC4	Q13310	644 aa	Known RBP eCLIP	20.02	■□□□□ 0.8
LAMB1-205	ENST00000439976	MTMR2	Q13614	643 aa		20.02	■□□□□ 0.8
LAMB1-205	ENST00000439976	SHROOM1	Q2M3G4	852 aa	Predicted RBP	20.02	■□□□□ 0.8
LAMB1-205	ENST00000439976	MAP3K21	Q5TCX8	1036 aa		20.02	■□□□□ 0.8
LAMB1-205	ENST00000439976	WDR18	Q9BV38	432 aa		20.02	■□□□□ 0.8
LAMB1-205	ENST00000439976	TXNRD2	Q9NNW7	524 aa		20.02	■□□□□ 0.8
LAMB1-205	ENST00000439976	PNMA6E	A0A0J9YXQ4	647 aa		20.01	■□□□□ 0.79
LAMB1-205	ENST00000439976	HOXA7	P31268	230 aa	Predicted RBP	20.01	■□□□□ 0.79
LAMB1-205	ENST00000439976	BACE1	P56817	501 aa		20.01	■□□□□ 0.79
LAMB1-205	ENST00000439976	METTL16	Q86W50	562 aa	Known RBP	20.01	■□□□□ 0.79
LAMB1-205	ENST00000439976	C7orf61	Q8IZ16	206 aa		20.01	■□□□□ 0.79
LAMB1-205	ENST00000439976	HMX1	Q9NP08	348 aa	Predicted RBP	20.01	■□□□□ 0.79
LAMB1-205	ENST00000439976	PI4KB	Q9UBF8	816 aa		20.01	■□□□□ 0.79
LAMB1-205	ENST00000439976	OGDHL	Q9ULD0	1010 aa		20.01	■□□□□ 0.79
LAMB1-205	ENST00000439976	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	20.01	■□□□□ 0.79
LAMB1-205	ENST00000439976	TNN	Q9UQP3	1299 aa		20.01	■□□□□ 0.79
LAMB1-205	ENST00000439976	FOCAD	Q5VW36	1801 aa		20	■□□□□ 0.79
LAMB1-205	ENST00000439976	POTEE	Q6S8J3	1075 aa		20	■□□□□ 0.79
LAMB1-205	ENST00000439976	ADGRA1	Q86SQ6	560 aa		20	■□□□□ 0.79
LAMB1-205	ENST00000439976	P2RX7	Q99572	595 aa	Known RBP	20	■□□□□ 0.79
LAMB1-205	ENST00000439976	NBPF3	Q9H094	633 aa		20	■□□□□ 0.79
LAMB1-205	ENST00000439976	AS3MT	Q9HBK9	375 aa		20	■□□□□ 0.79
LAMB1-205	ENST00000439976	MAST2	Q6P0Q8	1798 aa		20	■□□□□ 0.79
LAMB1-205	ENST00000439976	GORAB	Q5T7V8	394 aa		19.99	■□□□□ 0.79
LAMB1-205	ENST00000439976	AATF	Q9NY61	560 aa	Known RBP eCLIP	19.99	■□□□□ 0.79
LAMB1-205	ENST00000439976	LRP2BP	Q9P2M1	347 aa		19.99	■□□□□ 0.79
LAMB1-205	ENST00000439976	MYO5A	Q9Y4I1	1855 aa	Known RBP	19.99	■□□□□ 0.79
LAMB1-205	ENST00000439976	ASNS	P08243	561 aa		19.98	■□□□□ 0.79
LAMB1-205	ENST00000439976	UQCRFS1P1	P0C7P4	283 aa		19.98	■□□□□ 0.79
LAMB1-205	ENST00000439976	TRIM27	P14373	513 aa		19.98	■□□□□ 0.79
LAMB1-205	ENST00000439976	CYP2B6	P20813	491 aa		19.98	■□□□□ 0.79
LAMB1-205	ENST00000439976	PPP4C	P60510	307 aa		19.98	■□□□□ 0.79
LAMB1-205	ENST00000439976	SLC17A8	Q8NDX2	589 aa		19.98	■□□□□ 0.79
LAMB1-205	ENST00000439976	USP6NL	Q92738	828 aa		19.98	■□□□□ 0.79
LAMB1-205	ENST00000439976	DHX36	Q9H2U1	1008 aa	Known RBP	19.98	■□□□□ 0.79
LAMB1-205	ENST00000439976	RBPJL	Q9UBG7	517 aa		19.98	■□□□□ 0.79

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms