RNA–Protein interactions for RNA: ENST00000439200.5

CHEK2-216, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 906 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-216ENST00000439200 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
CHEK2-216ENST00000439200 TBC1D12O60347 775 aa16.36■□□□□ 0.21
CHEK2-216ENST00000439200 SPP2Q13103 211 aa16.36■□□□□ 0.21
CHEK2-216ENST00000439200 FAM110CQ1W6H9 321 aa16.36■□□□□ 0.21
CHEK2-216ENST00000439200 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
CHEK2-216ENST00000439200 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
CHEK2-216ENST00000439200 PROCA1Q8NCQ7 364 aaPredicted RBP16.36■□□□□ 0.21
CHEK2-216ENST00000439200 DIS3LQ8TF46 1054 aaKnown RBP16.36■□□□□ 0.21
CHEK2-216ENST00000439200 NEUROD6Q96NK8 337 aa16.36■□□□□ 0.21
CHEK2-216ENST00000439200 CRISPLD2Q9H0B8 497 aa16.36■□□□□ 0.21
CHEK2-216ENST00000439200 HMG20BQ9P0W2 317 aa16.36■□□□□ 0.21
CHEK2-216ENST00000439200 AKAP2Q9Y2D5 859 aa16.36■□□□□ 0.21
CHEK2-216ENST00000439200 ATAD5Q96QE3 1844 aa16.35■□□□□ 0.21
CHEK2-216ENST00000439200 HMGCS2P54868 508 aa16.35■□□□□ 0.21
CHEK2-216ENST00000439200 RRP1BQ14684 758 aaKnown RBP16.35■□□□□ 0.21
CHEK2-216ENST00000439200 NSUN4Q96CB9 384 aaKnown RBP16.35■□□□□ 0.21
CHEK2-216ENST00000439200 PAWRQ96IZ0 340 aaKnown RBP16.35■□□□□ 0.21
CHEK2-216ENST00000439200 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.35■□□□□ 0.21
CHEK2-216ENST00000439200 OSBPL5Q9H0X9 879 aaPredicted RBP16.35■□□□□ 0.21
CHEK2-216ENST00000439200 UNC80Q8N2C7 3258 aa16.35■□□□□ 0.21
CHEK2-216ENST00000439200 ALPK3Q96L96 1907 aa16.35■□□□□ 0.21
CHEK2-216ENST00000439200 SOX1O00570 391 aaPredicted RBP16.34■□□□□ 0.21
CHEK2-216ENST00000439200 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
CHEK2-216ENST00000439200 GSTO1P78417 241 aa16.34■□□□□ 0.21
CHEK2-216ENST00000439200 SPATA5Q8NB90 893 aa16.34■□□□□ 0.21
CHEK2-216ENST00000439200 ZNF280CQ8ND82 737 aa16.34■□□□□ 0.21
CHEK2-216ENST00000439200 STAP2Q9UGK3 403 aa16.34■□□□□ 0.21
CHEK2-216ENST00000439200 COL2A1P02458 1487 aaPredicted RBP16.34■□□□□ 0.21
CHEK2-216ENST00000439200 DOCK3Q8IZD9 2030 aa16.33■□□□□ 0.21
CHEK2-216ENST00000439200 CT47B1P0C2W7 299 aaPredicted RBP16.33■□□□□ 0.2
CHEK2-216ENST00000439200 CAP2P40123 477 aa16.33■□□□□ 0.2
CHEK2-216ENST00000439200 TRIM32Q13049 653 aa16.33■□□□□ 0.2
CHEK2-216ENST00000439200 GORABQ5T7V8 394 aa16.33■□□□□ 0.2
CHEK2-216ENST00000439200 TEX11Q8IYF3 940 aa16.33■□□□□ 0.2
CHEK2-216ENST00000439200 ASCC2Q9H1I8 757 aaPredicted RBP16.33■□□□□ 0.2
CHEK2-216ENST00000439200 RAI14Q9P0K7 980 aa16.33■□□□□ 0.2
CHEK2-216ENST00000439200 A0A1W2PPC1 479 aa16.32■□□□□ 0.2
CHEK2-216ENST00000439200 HMGCRP04035 888 aa16.32■□□□□ 0.2
CHEK2-216ENST00000439200 LDHCP07864 332 aa16.32■□□□□ 0.2
CHEK2-216ENST00000439200 GNAI3P08754 354 aa16.32■□□□□ 0.2
CHEK2-216ENST00000439200 GCLCP48506 637 aaPredicted RBP16.32■□□□□ 0.2
CHEK2-216ENST00000439200 PABPC4Q13310 644 aaKnown RBP eCLIP16.32■□□□□ 0.2
CHEK2-216ENST00000439200 MTX1Q13505 466 aa16.32■□□□□ 0.2
CHEK2-216ENST00000439200 NECAB2Q7Z6G3 386 aa16.32■□□□□ 0.2
CHEK2-216ENST00000439200 SH3RF3Q8TEJ3 882 aaPredicted RBP16.32■□□□□ 0.2
CHEK2-216ENST00000439200 LRCH3Q96II8 777 aa16.32■□□□□ 0.2
CHEK2-216ENST00000439200 SIPA1L1O43166 1804 aa16.31■□□□□ 0.2
CHEK2-216ENST00000439200 USP17L5A8MUK1 530 aa16.31■□□□□ 0.2
CHEK2-216ENST00000439200 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
CHEK2-216ENST00000439200 CAPN2P17655 700 aa16.31■□□□□ 0.2
CHEK2-216ENST00000439200 ARID4AP29374 1257 aaPredicted RBP16.31■□□□□ 0.2
CHEK2-216ENST00000439200 MCAMP43121 646 aa16.31■□□□□ 0.2
CHEK2-216ENST00000439200 RARSP54136 660 aaKnown RBP16.31■□□□□ 0.2
CHEK2-216ENST00000439200 C7orf61Q8IZ16 206 aa16.31■□□□□ 0.2
CHEK2-216ENST00000439200 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
CHEK2-216ENST00000439200 GJD2Q9UKL4 321 aa16.31■□□□□ 0.2
CHEK2-216ENST00000439200 PEX10O60683 326 aa16.3■□□□□ 0.2
CHEK2-216ENST00000439200 MTMR2Q13614 643 aa16.3■□□□□ 0.2
CHEK2-216ENST00000439200 SH3D19Q5HYK7 790 aa16.3■□□□□ 0.2
CHEK2-216ENST00000439200 ZMYND8Q9ULU4 1186 aaPredicted RBP16.3■□□□□ 0.2
CHEK2-216ENST00000439200 PLXNB2O15031 1838 aa16.3■□□□□ 0.2
CHEK2-216ENST00000439200 MAST2Q6P0Q8 1798 aa16.29■□□□□ 0.2
CHEK2-216ENST00000439200 DDX60LQ5H9U9 1706 aaKnown RBP16.29■□□□□ 0.2
CHEK2-216ENST00000439200 JAG1P78504 1218 aa16.29■□□□□ 0.2
CHEK2-216ENST00000439200 SHROOM1Q2M3G4 852 aaPredicted RBP16.29■□□□□ 0.2
CHEK2-216ENST00000439200 ANKLE1Q8NAG6 615 aa16.29■□□□□ 0.2
CHEK2-216ENST00000439200 AS3MTQ9HBK9 375 aa16.29■□□□□ 0.2
CHEK2-216ENST00000439200 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
CHEK2-216ENST00000439200 LRP2BPQ9P2M1 347 aa16.29■□□□□ 0.2
CHEK2-216ENST00000439200 MORF4L1Q9UBU8 362 aa16.29■□□□□ 0.2
CHEK2-216ENST00000439200 HERC5Q9UII4 1024 aaKnown RBP16.29■□□□□ 0.2
CHEK2-216ENST00000439200 TNNQ9UQP3 1299 aa16.29■□□□□ 0.2
CHEK2-216ENST00000439200 RPTORQ8N122 1335 aa16.28■□□□□ 0.2
CHEK2-216ENST00000439200 PNMA6EA0A0J9YXQ4 647 aa16.28■□□□□ 0.2
CHEK2-216ENST00000439200 CYP2B6P20813 491 aa16.28■□□□□ 0.2
CHEK2-216ENST00000439200 MNX1P50219 401 aaPredicted RBP16.28■□□□□ 0.2
CHEK2-216ENST00000439200 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
CHEK2-216ENST00000439200 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
CHEK2-216ENST00000439200 TRIB2Q92519 343 aa16.28■□□□□ 0.2
CHEK2-216ENST00000439200 ARHGAP45Q92619 1136 aa16.28■□□□□ 0.2
CHEK2-216ENST00000439200 NOL10Q9BSC4 688 aaKnown RBP16.28■□□□□ 0.2
CHEK2-216ENST00000439200 DNAJC18Q9H819 358 aa16.28■□□□□ 0.2
CHEK2-216ENST00000439200 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
CHEK2-216ENST00000439200 AATFQ9NY61 560 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHEK2-216ENST00000439200 EYSQ5T1H1 3165 aa16.28■□□□□ 0.2
CHEK2-216ENST00000439200 GNAI2P04899 355 aa16.27■□□□□ 0.2
CHEK2-216ENST00000439200 UQCRFS1P1P0C7P4 283 aa16.27■□□□□ 0.2
CHEK2-216ENST00000439200 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.2
CHEK2-216ENST00000439200 NAA16Q6N069 864 aaPredicted RBP16.27■□□□□ 0.2
CHEK2-216ENST00000439200 SLC17A8Q8NDX2 589 aa16.27■□□□□ 0.2
CHEK2-216ENST00000439200 P2RX7Q99572 595 aaKnown RBP16.27■□□□□ 0.2
CHEK2-216ENST00000439200 GDF15Q99988 308 aa16.27■□□□□ 0.2
CHEK2-216ENST00000439200 WDR18Q9BV38 432 aa16.27■□□□□ 0.2
CHEK2-216ENST00000439200 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
CHEK2-216ENST00000439200 PI4KBQ9UBF8 816 aa16.27■□□□□ 0.2
CHEK2-216ENST00000439200 FLT1P17948 1338 aa16.26■□□□□ 0.19
CHEK2-216ENST00000439200 GDF11O95390 407 aa16.26■□□□□ 0.19
CHEK2-216ENST00000439200 ASNSP08243 561 aa16.26■□□□□ 0.19
CHEK2-216ENST00000439200 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
CHEK2-216ENST00000439200 SYN1P17600 705 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms