RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 MUC3AQ02505 3323 aa12.28□□□□□ -0.44
SMPD4-208ENST00000439029 MYO9BQ13459 2157 aa12.28□□□□□ -0.44
SMPD4-208ENST00000439029 DOCK2Q92608 1830 aa12.27□□□□□ -0.44
SMPD4-208ENST00000439029 DOCK1Q14185 1865 aa12.27□□□□□ -0.44
SMPD4-208ENST00000439029 ADAMTS19Q8TE59 1207 aa12.27□□□□□ -0.45
SMPD4-208ENST00000439029 KAZALD1Q96I82 304 aa12.27□□□□□ -0.45
SMPD4-208ENST00000439029 TXNRD2Q9NNW7 524 aa12.27□□□□□ -0.45
SMPD4-208ENST00000439029 NDUFB9Q9Y6M9 179 aa12.27□□□□□ -0.45
SMPD4-208ENST00000439029 MYBBP1AQ9BQG0 1328 aaKnown RBP12.27□□□□□ -0.45
SMPD4-208ENST00000439029 MAST2Q6P0Q8 1798 aa12.26□□□□□ -0.45
SMPD4-208ENST00000439029 LTBP2Q14767 1821 aa12.26□□□□□ -0.45
SMPD4-208ENST00000439029 PDE8BO95263 885 aa12.26□□□□□ -0.45
SMPD4-208ENST00000439029 MYCNP04198 464 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-208ENST00000439029 CNGA1P29973 690 aa12.26□□□□□ -0.45
SMPD4-208ENST00000439029 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
SMPD4-208ENST00000439029 SH3RF1Q7Z6J0 888 aa12.26□□□□□ -0.45
SMPD4-208ENST00000439029 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
SMPD4-208ENST00000439029 PROCA1Q8NCQ7 364 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-208ENST00000439029 WDR66Q8TBY9 1149 aa12.26□□□□□ -0.45
SMPD4-208ENST00000439029 NECAB3Q96P71 396 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-208ENST00000439029 P2RX7Q99572 595 aaKnown RBP12.26□□□□□ -0.45
SMPD4-208ENST00000439029 DDX4Q9NQI0 724 aaKnown RBP12.26□□□□□ -0.45
SMPD4-208ENST00000439029 ENTPD3O75355 529 aa12.25□□□□□ -0.45
SMPD4-208ENST00000439029 LDHBP07195 334 aaKnown RBP12.25□□□□□ -0.45
SMPD4-208ENST00000439029 IFIT1P09914 478 aaKnown RBP12.25□□□□□ -0.45
SMPD4-208ENST00000439029 XRCC5P13010 732 aaKnown RBP12.25□□□□□ -0.45
SMPD4-208ENST00000439029 Q3C1V9 767 aa12.25□□□□□ -0.45
SMPD4-208ENST00000439029 GJC2Q5T442 439 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-208ENST00000439029 ZNF280CQ8ND82 737 aa12.25□□□□□ -0.45
SMPD4-208ENST00000439029 SOCS4Q8WXH5 440 aa12.25□□□□□ -0.45
SMPD4-208ENST00000439029 UHRF1Q96T88 793 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-208ENST00000439029 PORCNQ9H237 461 aa12.25□□□□□ -0.45
SMPD4-208ENST00000439029 MORF4L1Q9UBU8 362 aa12.25□□□□□ -0.45
SMPD4-208ENST00000439029 RGS2P41220 211 aa12.24□□□□□ -0.45
SMPD4-208ENST00000439029 EPHB4P54760 987 aa12.24□□□□□ -0.45
SMPD4-208ENST00000439029 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-208ENST00000439029 PABPC4Q13310 644 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMPD4-208ENST00000439029 RRP1BQ14684 758 aaKnown RBP12.24□□□□□ -0.45
SMPD4-208ENST00000439029 CCDC85BQ15834 202 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-208ENST00000439029 TRIM60Q495X7 471 aa12.24□□□□□ -0.45
SMPD4-208ENST00000439029 SLC4A10Q6U841 1118 aa12.24□□□□□ -0.45
SMPD4-208ENST00000439029 CCAR1Q8IX12 1150 aaKnown RBP12.24□□□□□ -0.45
SMPD4-208ENST00000439029 GPRC5AQ8NFJ5 357 aa12.24□□□□□ -0.45
SMPD4-208ENST00000439029 RNPC3Q96LT9 517 aaKnown RBP12.24□□□□□ -0.45
SMPD4-208ENST00000439029 ASB2Q96Q27 587 aa12.24□□□□□ -0.45
SMPD4-208ENST00000439029 PAGR1Q9BTK6 254 aa12.24□□□□□ -0.45
SMPD4-208ENST00000439029 FLRT1Q9NZU1 646 aa12.24□□□□□ -0.45
SMPD4-208ENST00000439029 TRIM43BA6NCK2 446 aa12.23□□□□□ -0.45
SMPD4-208ENST00000439029 NBPF7P0C2Y1 421 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-208ENST00000439029 MAP3K10Q02779 954 aa12.23□□□□□ -0.45
SMPD4-208ENST00000439029 PUM3Q15397 648 aaKnown RBP12.23□□□□□ -0.45
SMPD4-208ENST00000439029 ANO1Q5XXA6 986 aa12.23□□□□□ -0.45
SMPD4-208ENST00000439029 POTEEQ6S8J3 1075 aa12.23□□□□□ -0.45
SMPD4-208ENST00000439029 GPR142Q7Z601 462 aa12.23□□□□□ -0.45
SMPD4-208ENST00000439029 USP6NLQ92738 828 aa12.23□□□□□ -0.45
SMPD4-208ENST00000439029 TRIM43Q96BQ3 446 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-208ENST00000439029 IDI2Q9BXS1 227 aa12.23□□□□□ -0.45
SMPD4-208ENST00000439029 BICC1Q9H694 974 aaKnown RBP12.23□□□□□ -0.45
SMPD4-208ENST00000439029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.23□□□□□ -0.454e-6■■□□□ 13.5
SMPD4-208ENST00000439029 CWC22Q9HCG8 908 aaKnown RBP12.23□□□□□ -0.45
SMPD4-208ENST00000439029 DDX20Q9UHI6 824 aaKnown RBP12.23□□□□□ -0.45
SMPD4-208ENST00000439029 TCF20Q9UGU0 1960 aaKnown RBP12.23□□□□□ -0.45
SMPD4-208ENST00000439029 FRMPD3Q5JV73 1810 aa12.23□□□□□ -0.45
SMPD4-208ENST00000439029 MYH13Q9UKX3 1938 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 FGFR2P21802 821 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 ITGB8P26012 769 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 HERVK_113P62684 666 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 MTMR2Q13614 643 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 NCBP3Q53F19 620 aaKnown RBP12.22□□□□□ -0.45
SMPD4-208ENST00000439029 MORN1Q5T089 497 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 PLEKHH3Q7Z736 793 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 TRMT44Q8IYL2 757 aaKnown RBP12.22□□□□□ -0.45
SMPD4-208ENST00000439029 FERMT2Q96AC1 680 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 APBA2Q99767 749 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 PDLIM7Q9NR12 457 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 THEGQ9P2T0 379 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 RBPJLQ9UBG7 517 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 LOC285556D6RIA3 1793 aa12.22□□□□□ -0.45
SMPD4-208ENST00000439029 RFX7Q2KHR2 1363 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 DNM1LO00429 736 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 SLC5A1P13866 664 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 DNAJB2P25686 324 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 MAPK4P31152 587 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 CYP2C19P33261 490 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 WDR78Q5VTH9 848 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 MFSD14CQ5VZR4 134 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 ANKRD44Q8N8A2 993 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 TRPV1Q8NER1 839 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 ATXN2LQ8WWM7 1075 aaKnown RBP12.21□□□□□ -0.45
SMPD4-208ENST00000439029 LPAR1Q92633 364 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 ZNF576Q9H609 170 aa12.21□□□□□ -0.45
SMPD4-208ENST00000439029 MYH2Q9UKX2 1941 aa12.21□□□□□ -0.46
SMPD4-208ENST00000439029 DNAH12Q6ZR08 3092 aa12.21□□□□□ -0.46
SMPD4-208ENST00000439029 USP17L5A8MUK1 530 aa12.2□□□□□ -0.46
SMPD4-208ENST00000439029 VAMP4O75379 141 aa12.2□□□□□ -0.46
SMPD4-208ENST00000439029 BTDP43251 543 aa12.2□□□□□ -0.46
SMPD4-208ENST00000439029 ERVK-9P63128 1117 aa12.2□□□□□ -0.46
SMPD4-208ENST00000439029 ERVK-24P63145 666 aa12.2□□□□□ -0.46
SMPD4-208ENST00000439029 MRPS5P82675 430 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms