RNA–Protein interactions for RNA: ENST00000437113.2

LINC01039-201, Transcript of long intergenic non-protein coding RNA 1039, humanhuman

TSL 5 BASIC

Gene LINC01039, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01039-201ENST00000437113 CNTNAP1P78357 1384 aa12.43□□□□□ -0.42
LINC01039-201ENST00000437113 UNCXA6NJT0 531 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 PPP1R12BO60237 982 aaPredicted RBP12.42□□□□□ -0.42
LINC01039-201ENST00000437113 PPARAQ07869 468 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 NFIAQ12857 509 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 TRDNQ13061 729 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 RABEP1Q15276 862 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 SLC4A8Q2Y0W8 1093 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 RALYLQ86SE5 291 aaKnown RBP12.42□□□□□ -0.42
LINC01039-201ENST00000437113 HHIPL1Q96JK4 782 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 TEPSINQ96N21 525 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 TMEM39BQ9GZU3 492 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 GBA2Q9HCG7 927 aaPredicted RBP12.42□□□□□ -0.42
LINC01039-201ENST00000437113 TOMM22Q9NS69 142 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 FAM198AQ9UFP1 575 aa12.42□□□□□ -0.42
LINC01039-201ENST00000437113 SAP30BPQ9UHR5 308 aaKnown RBP12.42□□□□□ -0.42
LINC01039-201ENST00000437113 SCAF8Q9UPN6 1271 aaKnown RBP12.42□□□□□ -0.42
LINC01039-201ENST00000437113 USP17L12C9JPN9 530 aa12.41□□□□□ -0.42
LINC01039-201ENST00000437113 USP17L21D6R901 530 aa12.41□□□□□ -0.42
LINC01039-201ENST00000437113 HLA-DOAP06340 250 aa12.41□□□□□ -0.42
LINC01039-201ENST00000437113 CASTP20810 708 aaKnown RBP12.41□□□□□ -0.42
LINC01039-201ENST00000437113 CTDSPL2Q05D32 466 aa12.41□□□□□ -0.42
LINC01039-201ENST00000437113 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC01039-201ENST00000437113 NBPF12Q5TAG4 269 aaPredicted RBP12.41□□□□□ -0.42
LINC01039-201ENST00000437113 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
LINC01039-201ENST00000437113 CTR9Q6PD62 1173 aa12.41□□□□□ -0.42
LINC01039-201ENST00000437113 ARMC9Q7Z3E5 817 aa12.41□□□□□ -0.42
LINC01039-201ENST00000437113 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
LINC01039-201ENST00000437113 DHX36Q9H2U1 1008 aaKnown RBP12.41□□□□□ -0.42
LINC01039-201ENST00000437113 RNF41Q9H4P4 317 aaPredicted RBP12.41□□□□□ -0.42
LINC01039-201ENST00000437113 ABT1Q9ULW3 272 aaKnown RBP12.41□□□□□ -0.42
LINC01039-201ENST00000437113 TLL2Q9Y6L7 1015 aa12.41□□□□□ -0.42
LINC01039-201ENST00000437113 ATRNL1Q5VV63 1379 aa12.41□□□□□ -0.42
LINC01039-201ENST00000437113 E7EWF7 191 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 ST18O60284 1047 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 TCP10Q12799 353 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 TTLL12Q14166 644 aaPredicted RBP12.4□□□□□ -0.42
LINC01039-201ENST00000437113 MAP3K11Q16584 847 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 PRAMEF18Q5VWM3 479 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 BLOC1S2Q6QNY1 142 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 DLK2Q6UY11 383 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 MFSD6Q6ZSS7 791 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 SAPCD2Q86UD0 394 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 ZSCAN29Q8IWY8 852 aaPredicted RBP12.4□□□□□ -0.42
LINC01039-201ENST00000437113 STK11IPQ8N1F8 1099 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 KCNB2Q92953 911 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 NEK1Q96PY6 1258 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 OSBPL5Q9H0X9 879 aaPredicted RBP12.4□□□□□ -0.42
LINC01039-201ENST00000437113 CNNM2Q9H8M5 875 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 CYP46A1Q9Y6A2 500 aa12.4□□□□□ -0.42
LINC01039-201ENST00000437113 CYP2D7A0A087X1C5 515 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 HMGB1P09429 215 aaKnown RBP12.39□□□□□ -0.43
LINC01039-201ENST00000437113 IREB2P48200 963 aaKnown RBP12.39□□□□□ -0.43
LINC01039-201ENST00000437113 NEK4P51957 841 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 FGD1P98174 961 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 PDE4BQ07343 736 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 ADCK5Q3MIX3 580 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 TSGA10IPQ3SY00 556 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 SBK1Q52WX2 424 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 RRP12Q5JTH9 1297 aaKnown RBP12.39□□□□□ -0.43
LINC01039-201ENST00000437113 AKNAD1Q5T1N1 836 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 TTC6Q86TZ1 520 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 TBC1D10CQ8IV04 446 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 NCOA7Q8NI08 942 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 CSRNP1Q96S65 589 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
LINC01039-201ENST00000437113 KRT23Q9C075 422 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 ZNF287Q9HBT7 754 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 DDX4Q9NQI0 724 aaKnown RBP12.39□□□□□ -0.43
LINC01039-201ENST00000437113 PI4KBQ9UBF8 816 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
LINC01039-201ENST00000437113 RASSF10A6NK89 507 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 TBC1D12O60347 775 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 CYP2D6P10635 497 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 PCP11498 1178 aaKnown RBP12.38□□□□□ -0.43
LINC01039-201ENST00000437113 ECE1P42892 770 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 HUNKP57058 714 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 DEFB115Q30KQ5 88 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 C12orf60Q5U649 245 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 CRACR2BQ8N4Y2 399 aaPredicted RBP12.38□□□□□ -0.43
LINC01039-201ENST00000437113 STAG1Q8WVM7 1258 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 KIF2CQ99661 725 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 ZNF341Q9BYN7 854 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 TM6SF1Q9BZW5 370 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 MKRN1Q9UHC7 482 aaKnown RBP12.38□□□□□ -0.43
LINC01039-201ENST00000437113 ANAPC4Q9UJX5 808 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 ANGEL1Q9UNK9 670 aaKnown RBP12.38□□□□□ -0.43
LINC01039-201ENST00000437113 TAF6LQ9Y6J9 622 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 SIPA1L1O43166 1804 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 ROBO3Q96MS0 1386 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 SSC5DA1L4H1 1573 aa12.38□□□□□ -0.43
LINC01039-201ENST00000437113 NEDD4P46934 1319 aa12.37□□□□□ -0.43
LINC01039-201ENST00000437113 MAP3K10Q02779 954 aa12.37□□□□□ -0.43
LINC01039-201ENST00000437113 BECN1Q14457 450 aa12.37□□□□□ -0.43
LINC01039-201ENST00000437113 LDLRAD1Q5T700 205 aa12.37□□□□□ -0.43
LINC01039-201ENST00000437113 STOX1Q6ZVD7 989 aa12.37□□□□□ -0.43
LINC01039-201ENST00000437113 RUFY3Q7L099 469 aa12.37□□□□□ -0.43
LINC01039-201ENST00000437113 FOXP4Q8IVH2 680 aaPredicted RBP12.37□□□□□ -0.43
LINC01039-201ENST00000437113 HSCBQ8IWL3 235 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms