RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 SCYL3Q8IZE3 742 aa13.59□□□□□ -0.23
COPS7B-212ENST00000436564 KLHDC4Q8TBB5 520 aa13.59□□□□□ -0.23
COPS7B-212ENST00000436564 COA7Q96BR5 231 aa13.59□□□□□ -0.23
COPS7B-212ENST00000436564 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
COPS7B-212ENST00000436564 FAM198AQ9UFP1 575 aa13.59□□□□□ -0.23
COPS7B-212ENST00000436564 SLC45A1Q9Y2W3 748 aa13.59□□□□□ -0.23
COPS7B-212ENST00000436564 KIF16BQ96L93 1317 aa13.59□□□□□ -0.23
COPS7B-212ENST00000436564 SNPHO15079 494 aa13.58□□□□□ -0.24
COPS7B-212ENST00000436564 SLC5A1P13866 664 aa13.58□□□□□ -0.24
COPS7B-212ENST00000436564 PTPRAP18433 802 aa13.58□□□□□ -0.24
COPS7B-212ENST00000436564 C7orf61Q8IZ16 206 aa13.58□□□□□ -0.24
COPS7B-212ENST00000436564 GDF15Q99988 308 aa13.58□□□□□ -0.24
COPS7B-212ENST00000436564 ZMYND8Q9ULU4 1186 aaPredicted RBP13.58□□□□□ -0.24
COPS7B-212ENST00000436564 AFG3L2Q9Y4W6 797 aa13.58□□□□□ -0.24
COPS7B-212ENST00000436564 LRRFIP2Q9Y608 721 aaKnown RBP13.58□□□□□ -0.24
COPS7B-212ENST00000436564 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
COPS7B-212ENST00000436564 LDHBP07195 334 aaKnown RBP13.57□□□□□ -0.24
COPS7B-212ENST00000436564 FGFR2P21802 821 aa13.57□□□□□ -0.24
COPS7B-212ENST00000436564 PRDX5P30044 214 aa13.57□□□□□ -0.24
COPS7B-212ENST00000436564 CCDC184Q52MB2 194 aa13.57□□□□□ -0.24
COPS7B-212ENST00000436564 ZSCAN29Q8IWY8 852 aaPredicted RBP13.57□□□□□ -0.24
COPS7B-212ENST00000436564 ZFPM1Q8IX07 1006 aa13.57□□□□□ -0.24
COPS7B-212ENST00000436564 ANKRD13CQ8N6S4 541 aa13.57□□□□□ -0.24
COPS7B-212ENST00000436564 DIS3LQ8TF46 1054 aaKnown RBP13.57□□□□□ -0.24
COPS7B-212ENST00000436564 LPIN2Q92539 896 aa13.57□□□□□ -0.24
COPS7B-212ENST00000436564 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.24
COPS7B-212ENST00000436564 UTYO14607 1347 aa13.57□□□□□ -0.24
COPS7B-212ENST00000436564 TRIM75PA6NK02 468 aa13.56□□□□□ -0.24
COPS7B-212ENST00000436564 ANKRD44Q8N8A2 993 aa13.56□□□□□ -0.24
COPS7B-212ENST00000436564 ANKLE1Q8NAG6 615 aa13.56□□□□□ -0.24
COPS7B-212ENST00000436564 STXBP5LQ9Y2K9 1186 aa13.56□□□□□ -0.24
COPS7B-212ENST00000436564 PPP1R37O75864 691 aa13.55□□□□□ -0.24
COPS7B-212ENST00000436564 RGS3P49796 1198 aa13.55□□□□□ -0.24
COPS7B-212ENST00000436564 LRIT3Q3SXY7 679 aa13.55□□□□□ -0.24
COPS7B-212ENST00000436564 Q7L0L9 218 aa13.55□□□□□ -0.24
COPS7B-212ENST00000436564 NBPF3Q9H094 633 aa13.55□□□□□ -0.24
COPS7B-212ENST00000436564 GNL3LQ9NVN8 582 aaKnown RBP13.55□□□□□ -0.24
COPS7B-212ENST00000436564 PNMA3Q9UL41 463 aa13.55□□□□□ -0.24
COPS7B-212ENST00000436564 AGTPBP1Q9UPW5 1226 aa13.55□□□□□ -0.24
COPS7B-212ENST00000436564 EYA2O00167 538 aa13.54□□□□□ -0.24
COPS7B-212ENST00000436564 CTNND1O60716 968 aaKnown RBP13.54□□□□□ -0.24
COPS7B-212ENST00000436564 ENTPD3O75355 529 aa13.54□□□□□ -0.24
COPS7B-212ENST00000436564 SYN1P17600 705 aa13.54□□□□□ -0.24
COPS7B-212ENST00000436564 FAM110CQ1W6H9 321 aa13.54□□□□□ -0.24
COPS7B-212ENST00000436564 TDHQ8IZJ6 230 aa13.54□□□□□ -0.24
COPS7B-212ENST00000436564 TMC2Q8TDI7 906 aa13.54□□□□□ -0.24
COPS7B-212ENST00000436564 IDI2Q9BXS1 227 aa13.54□□□□□ -0.24
COPS7B-212ENST00000436564 HMX1Q9NP08 348 aaPredicted RBP13.54□□□□□ -0.24
COPS7B-212ENST00000436564 UNC80Q8N2C7 3258 aa13.54□□□□□ -0.24
COPS7B-212ENST00000436564 HMGCRP04035 888 aa13.53□□□□□ -0.24
COPS7B-212ENST00000436564 MAGEA10P43363 369 aaPredicted RBP13.53□□□□□ -0.24
COPS7B-212ENST00000436564 UBE2OQ9C0C9 1292 aaKnown RBP13.53□□□□□ -0.24
COPS7B-212ENST00000436564 C11orf49Q9H6J7 331 aa13.53□□□□□ -0.24
COPS7B-212ENST00000436564 MTMR10Q9NXD2 777 aa13.53□□□□□ -0.24
COPS7B-212ENST00000436564 RPTORQ8N122 1335 aa13.53□□□□□ -0.24
COPS7B-212ENST00000436564 ATRNL1Q5VV63 1379 aa13.53□□□□□ -0.24
COPS7B-212ENST00000436564 MAP3K10Q02779 954 aa13.52□□□□□ -0.25
COPS7B-212ENST00000436564 TREML2Q5T2D2 321 aa13.52□□□□□ -0.25
COPS7B-212ENST00000436564 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.25
COPS7B-212ENST00000436564 DENND2AQ9ULE3 1009 aa13.52□□□□□ -0.25
COPS7B-212ENST00000436564 SALL1Q9NSC2 1324 aa13.51□□□□□ -0.25
COPS7B-212ENST00000436564 DDTLA6NHG4 134 aaPredicted RBP13.51□□□□□ -0.25
COPS7B-212ENST00000436564 SLURP2P0DP57 97 aa13.51□□□□□ -0.25
COPS7B-212ENST00000436564 GCLCP48506 637 aaPredicted RBP13.51□□□□□ -0.25
COPS7B-212ENST00000436564 PABPC4Q13310 644 aaKnown RBP eCLIP13.51□□□□□ -0.25
COPS7B-212ENST00000436564 PICALMQ13492 652 aa13.51□□□□□ -0.25
COPS7B-212ENST00000436564 CCDC84Q86UT8 332 aaPredicted RBP13.51□□□□□ -0.25
COPS7B-212ENST00000436564 DZIP1Q86YF9 867 aaKnown RBP13.51□□□□□ -0.25
COPS7B-212ENST00000436564 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
COPS7B-212ENST00000436564 ZGPATQ8N5A5 531 aaKnown RBP13.51□□□□□ -0.25
COPS7B-212ENST00000436564 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.51□□□□□ -0.25
COPS7B-212ENST00000436564 SEMA3EO15041 775 aa13.5□□□□□ -0.25
COPS7B-212ENST00000436564 TRIM32Q13049 653 aa13.5□□□□□ -0.25
COPS7B-212ENST00000436564 SPP2Q13103 211 aa13.5□□□□□ -0.25
COPS7B-212ENST00000436564 ATP2B3Q16720 1220 aa13.5□□□□□ -0.25
COPS7B-212ENST00000436564 PROCA1Q8NCQ7 364 aaPredicted RBP13.5□□□□□ -0.25
COPS7B-212ENST00000436564 USP44Q9H0E7 712 aa13.5□□□□□ -0.25
COPS7B-212ENST00000436564 MRS2Q9HD23 443 aa13.5□□□□□ -0.25
COPS7B-212ENST00000436564 CEP126Q9P2H0 1117 aa13.5□□□□□ -0.25
COPS7B-212ENST00000436564 CUL9Q8IWT3 2517 aa13.5□□□□□ -0.25
COPS7B-212ENST00000436564 GAKO14976 1311 aa13.49□□□□□ -0.25
COPS7B-212ENST00000436564 RFX5P48382 616 aaPredicted RBP13.49□□□□□ -0.25
COPS7B-212ENST00000436564 COL25A1Q9BXS0 654 aaPredicted RBP13.49□□□□□ -0.25
COPS7B-212ENST00000436564 SIL1Q9H173 461 aa13.49□□□□□ -0.25
COPS7B-212ENST00000436564 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.49□□□□□ -0.25
COPS7B-212ENST00000436564 DDX4Q9NQI0 724 aaKnown RBP13.49□□□□□ -0.25
COPS7B-212ENST00000436564 ABCF2Q9UG63 623 aa13.49□□□□□ -0.25
COPS7B-212ENST00000436564 GJD2Q9UKL4 321 aa13.49□□□□□ -0.25
COPS7B-212ENST00000436564 OGDHLQ9ULD0 1010 aa13.49□□□□□ -0.25
COPS7B-212ENST00000436564 PTPRCP08575 1304 aa13.48□□□□□ -0.25
COPS7B-212ENST00000436564 TBC1D12O60347 775 aa13.48□□□□□ -0.25
COPS7B-212ENST00000436564 BTDP43251 543 aa13.48□□□□□ -0.25
COPS7B-212ENST00000436564 PHKA1P46020 1223 aa13.48□□□□□ -0.25
COPS7B-212ENST00000436564 ATG9AQ7Z3C6 839 aa13.48□□□□□ -0.25
COPS7B-212ENST00000436564 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.48□□□□□ -0.25
COPS7B-212ENST00000436564 ZNF280CQ8ND82 737 aa13.48□□□□□ -0.25
COPS7B-212ENST00000436564 VCANP13611 3396 aa13.47□□□□□ -0.25
COPS7B-212ENST00000436564 CIAO1O76071 339 aa13.47□□□□□ -0.25
COPS7B-212ENST00000436564 CYP2B6P20813 491 aa13.47□□□□□ -0.25
COPS7B-212ENST00000436564 HMGCS2P54868 508 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms