RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 ANGEL1Q9UNK9 670 aaKnown RBP17.07■□□□□ 0.32
TOP3B-206ENST00000436282 UBR2Q8IWV8 1755 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 NUP188Q5SRE5 1749 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 CSF1RP07333 972 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 CPLX2Q6PUV4 134 aaKnown RBP17.06■□□□□ 0.32
TOP3B-206ENST00000436282 DACH1Q9UI36 760 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 ADAM21Q9UKJ8 722 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 MAN1B1Q9UKM7 699 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 TAOK2Q9UL54 1235 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 NFE2L3Q9Y4A8 694 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 IRS4O14654 1257 aaPredicted RBP17.06■□□□□ 0.32
TOP3B-206ENST00000436282 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 TTLL11Q8NHH1 800 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 GOLGA5Q8TBA6 731 aa17.06■□□□□ 0.32
TOP3B-206ENST00000436282 ENOX1Q8TC92 643 aaKnown RBP17.06■□□□□ 0.32
TOP3B-206ENST00000436282 KARSQ15046 597 aaKnown RBP17.05■□□□□ 0.32
TOP3B-206ENST00000436282 MLKLQ8NB16 471 aa17.05■□□□□ 0.32
TOP3B-206ENST00000436282 DESI2Q9BSY9 194 aa17.05■□□□□ 0.32
TOP3B-206ENST00000436282 TRIM34Q9BYJ4 488 aa17.05■□□□□ 0.32
TOP3B-206ENST00000436282 MYH7P12883 1935 aa17.05■□□□□ 0.32
TOP3B-206ENST00000436282 H3BQF6 201 aa17.05■□□□□ 0.32
TOP3B-206ENST00000436282 FOXN1O15353 648 aa17.05■□□□□ 0.32
TOP3B-206ENST00000436282 CCDC175P0C221 793 aa17.05■□□□□ 0.32
TOP3B-206ENST00000436282 TRDNQ13061 729 aa17.05■□□□□ 0.32
TOP3B-206ENST00000436282 SRGAP1Q7Z6B7 1085 aa17.05■□□□□ 0.32
TOP3B-206ENST00000436282 KRI1Q8N9T8 703 aaKnown RBP17.05■□□□□ 0.32
TOP3B-206ENST00000436282 HELBQ8NG08 1087 aaPredicted RBP17.05■□□□□ 0.32
TOP3B-206ENST00000436282 HNRNPLLQ8WVV9 542 aaKnown RBP17.05■□□□□ 0.32
TOP3B-206ENST00000436282 RAI14Q9P0K7 980 aa17.05■□□□□ 0.32
TOP3B-206ENST00000436282 ANKRD18BA2A2Z9 1011 aa17.04■□□□□ 0.32
TOP3B-206ENST00000436282 CYP19A1P11511 503 aaPredicted RBP17.04■□□□□ 0.32
TOP3B-206ENST00000436282 CHMP4BP1P59074 171 aa17.04■□□□□ 0.32
TOP3B-206ENST00000436282 FMR1Q06787 632 aaKnown RBP eCLIP17.04■□□□□ 0.32
TOP3B-206ENST00000436282 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.04■□□□□ 0.32
TOP3B-206ENST00000436282 MRPL44Q9H9J2 332 aaKnown RBP17.04■□□□□ 0.32
TOP3B-206ENST00000436282 MCAMP43121 646 aa17.04■□□□□ 0.32
TOP3B-206ENST00000436282 CTSWP56202 376 aa17.04■□□□□ 0.32
TOP3B-206ENST00000436282 TRIM29Q14134 588 aa17.04■□□□□ 0.32
TOP3B-206ENST00000436282 POSTNQ15063 836 aa17.04■□□□□ 0.32
TOP3B-206ENST00000436282 NT5DC1Q5TFE4 455 aa17.04■□□□□ 0.32
TOP3B-206ENST00000436282 NUTM2AQ8IVF1 878 aaPredicted RBP17.04■□□□□ 0.32
TOP3B-206ENST00000436282 PLA2G12BQ9BX93 195 aa17.04■□□□□ 0.32
TOP3B-206ENST00000436282 RIPOR2Q9Y4F9 1068 aa17.04■□□□□ 0.32
TOP3B-206ENST00000436282 POTEB2H3BUK9 544 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 EXOC5O00471 708 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 SH2B2O14492 632 aaPredicted RBP17.03■□□□□ 0.32
TOP3B-206ENST00000436282 GPAA1O43292 621 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 IDH1O75874 414 aaKnown RBP17.03■□□□□ 0.32
TOP3B-206ENST00000436282 LMAN1P49257 510 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 PHKBQ93100 1093 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 GYS2P54840 703 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 APOA5Q6Q788 366 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 IQUBQ8NA54 791 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 PANX2Q96RD6 677 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 FBXO3Q9UK99 471 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 NR1I3Q14994 352 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 DZIP3Q86Y13 1208 aaKnown RBP17.03■□□□□ 0.32
TOP3B-206ENST00000436282 MSL3Q8N5Y2 521 aaKnown RBP17.03■□□□□ 0.32
TOP3B-206ENST00000436282 CEP112Q8N8E3 955 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 TRIML1Q8N9V2 468 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 NBPF3Q9H094 633 aa17.03■□□□□ 0.32
TOP3B-206ENST00000436282 ABCC12Q96J65 1359 aa17.02■□□□□ 0.32
TOP3B-206ENST00000436282 AKR1B15C9JRZ8 316 aaPredicted RBP17.02■□□□□ 0.32
TOP3B-206ENST00000436282 APPP05067 770 aa17.02■□□□□ 0.32
TOP3B-206ENST00000436282 USP5P45974 858 aa17.02■□□□□ 0.32
TOP3B-206ENST00000436282 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.32
TOP3B-206ENST00000436282 MORC3Q14149 939 aa17.02■□□□□ 0.32
TOP3B-206ENST00000436282 RASSF4Q9H2L5 321 aa17.02■□□□□ 0.32
TOP3B-206ENST00000436282 RXRAP19793 462 aa17.02■□□□□ 0.31
TOP3B-206ENST00000436282 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.31
TOP3B-206ENST00000436282 MTF1Q14872 753 aa17.02■□□□□ 0.31
TOP3B-206ENST00000436282 BEND6Q5SZJ8 279 aaPredicted RBP17.02■□□□□ 0.31
TOP3B-206ENST00000436282 SLC9C2Q5TAH2 1124 aa17.02■□□□□ 0.31
TOP3B-206ENST00000436282 CYB5R4Q7L1T6 521 aa17.02■□□□□ 0.31
TOP3B-206ENST00000436282 TRMT44Q8IYL2 757 aaKnown RBP17.02■□□□□ 0.31
TOP3B-206ENST00000436282 ANKZF1Q9H8Y5 726 aa17.02■□□□□ 0.31
TOP3B-206ENST00000436282 CDC23Q9UJX2 597 aa17.02■□□□□ 0.31
TOP3B-206ENST00000436282 RAB21Q9UL25 225 aa17.02■□□□□ 0.31
TOP3B-206ENST00000436282 TOGARAM1Q9Y4F4 1720 aa17.02■□□□□ 0.31
TOP3B-206ENST00000436282 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 A0A1B0GTH6 734 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 ACTN2P35609 894 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 NTRK3Q16288 839 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 HDXQ7Z353 690 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 MSANTD4Q8NCY6 345 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 NAA15Q9BXJ9 866 aaKnown RBP17.01■□□□□ 0.31
TOP3B-206ENST00000436282 IRX2Q9BZI1 471 aaPredicted RBP17.01■□□□□ 0.31
TOP3B-206ENST00000436282 SOWAHDA6NJG2 315 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 MYO1CO00159 1063 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 SNAP23O00161 211 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 PRR29P0C7W0 189 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 TUBB4BP68371 445 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 TUBB2AQ13885 445 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 MICU3Q86XE3 530 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 STK11IPQ8N1F8 1099 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 IPO4Q8TEX9 1081 aaKnown RBP17.01■□□□□ 0.31
TOP3B-206ENST00000436282 TUBB2BQ9BVA1 445 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 ZSWIM4Q9H7M6 989 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 ADGRG1Q9Y653 693 aa17.01■□□□□ 0.31
TOP3B-206ENST00000436282 PAPPAQ13219 1627 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms