RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 PXYLP1Q8TE99 480 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 SMCR8Q8TEV9 937 aaPredicted RBP13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 U2AF1L4Q8WU68 220 aaKnown RBP13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 TBC1D2Q9BYX2 928 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 IPO8O15397 1037 aaKnown RBP13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 BCAR3O75815 825 aa13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 UBXN2AP68543 259 aa13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 NEUROD6Q96NK8 337 aa13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 RNF208Q9H0X6 261 aa13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 UNC93B1Q9H1C4 597 aa13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 PRO3102Q9H379 93 aa13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 GPR108Q9NPR9 543 aa13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 PAK6Q9NQU5 681 aaPredicted RBP13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 MAST2Q6P0Q8 1798 aa13.5□□□□□ -0.25
SPTLC1P4-201ENST00000435997 TNPO2O14787 897 aaKnown RBP13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 ADCY3O60266 1144 aa13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 INHAP05111 366 aa13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 LDHCP07864 332 aa13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 UQCRFS1P1P0C7P4 283 aa13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 CAP2P40123 477 aa13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 SH3D19Q5HYK7 790 aa13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 METTL16Q86W50 562 aaKnown RBP13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 ZNF280CQ8ND82 737 aa13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 ZNF512BQ96KM6 892 aaPredicted RBP13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 DNAJC18Q9H819 358 aa13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 HERC5Q9UII4 1024 aaKnown RBP13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 PNMA3Q9UL41 463 aa13.49□□□□□ -0.25
SPTLC1P4-201ENST00000435997 SIPA1L1O43166 1804 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 CEP290O15078 2479 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 TRIOBPQ9H2D6 2365 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 IGSF3O75054 1194 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 ELNP15502 786 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 PPP4CP60510 307 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 SPP2Q13103 211 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 TNNI3KQ59H18 835 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 ADGRA1Q86SQ6 560 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 TMEM57Q8N5G2 664 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 ANKRD13CQ8N6S4 541 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 SSH3Q8TE77 659 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 SH3RF3Q8TEJ3 882 aaPredicted RBP13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 CRISPLD2Q9H0B8 497 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 RAI14Q9P0K7 980 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 FPGT-TNNI3KV9GXZ4 949 aa13.48□□□□□ -0.25
SPTLC1P4-201ENST00000435997 FLT1P17948 1338 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 FARP2O94887 1054 aaPredicted RBP13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 SGPL1O95470 568 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 CAPN2P17655 700 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 GCLCP48506 637 aaPredicted RBP13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 HMGCS2P54868 508 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 G3BP1Q13283 466 aaKnown RBP eCLIP13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 GORABQ5T7V8 394 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 TEX11Q8IYF3 940 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 DBNDD2Q9BQY9 259 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 DHX36Q9H2U1 1008 aaKnown RBP13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 PI4KBQ9UBF8 816 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 AK9Q5TCS8 1911 aa13.47□□□□□ -0.25
SPTLC1P4-201ENST00000435997 MGAMO43451 1857 aa13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 USP17L5A8MUK1 530 aa13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 CYP2E1P05181 493 aaPredicted RBP13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 FRAT1Q92837 279 aaPredicted RBP13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 HTATIP2Q9BUP3 242 aa13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 WDR18Q9BV38 432 aa13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 ASCC2Q9H1I8 757 aaPredicted RBP13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 AATFQ9NY61 560 aaKnown RBP eCLIP13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 RBM27Q9P2N5 1060 aaKnown RBP13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 MORF4L1Q9UBU8 362 aa13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 BIN2Q9UBW5 565 aaPredicted RBP13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 NOP58Q9Y2X3 529 aaKnown RBP13.46□□□□□ -0.25
SPTLC1P4-201ENST00000435997 PLCG2P16885 1265 aa13.45□□□□□ -0.26
SPTLC1P4-201ENST00000435997 JAG1P78504 1218 aa13.45□□□□□ -0.26
SPTLC1P4-201ENST00000435997 ZKSCAN2Q63HK3 967 aa13.45□□□□□ -0.26
SPTLC1P4-201ENST00000435997 NAA16Q6N069 864 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1P4-201ENST00000435997 COA7Q96BR5 231 aa13.45□□□□□ -0.26
SPTLC1P4-201ENST00000435997 DBNLQ9UJU6 430 aaKnown RBP13.45□□□□□ -0.26
SPTLC1P4-201ENST00000435997 GJD2Q9UKL4 321 aa13.45□□□□□ -0.26
SPTLC1P4-201ENST00000435997 ZBTB7BO15156 539 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 BAG3O95817 575 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 HMGCRP04035 888 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 ASNSP08243 561 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 HOXA7P31268 230 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 DSG3P32926 999 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 BACE1P56817 501 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 ATP8B2P98198 1209 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 PABPC4Q13310 644 aaKnown RBP eCLIP13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 MTMR2Q13614 643 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 SHROOM1Q2M3G4 852 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 TTC39AQ5SRH9 613 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 DPF3Q92784 378 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 DEFB118Q96PH6 123 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 AS3MTQ9HBK9 375 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 SNRKQ9NRH2 765 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 GINM1Q9NU53 330 aa13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 TLR7Q9NYK1 1049 aaKnown RBP13.44□□□□□ -0.26
SPTLC1P4-201ENST00000435997 RLBP1P12271 317 aa13.43□□□□□ -0.26
SPTLC1P4-201ENST00000435997 CCDC158Q5M9N0 1113 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms