RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 MIS18AQ9NYP9 233 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 MAP3K19Q56UN5 1328 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 FSBPO95073 299 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 KIF4AO95239 1232 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 PSMA5P28066 241 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 ARHGAP25P42331 645 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 CUL3Q13618 768 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 BRD3Q15059 726 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 ENOX2Q16206 610 aaKnown RBP8.27□□□□□ -1.08
GARNL3-205ENST00000435213 KIAA0753Q2KHM9 967 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 MTHFSDQ2M296 383 aaKnown RBP8.27□□□□□ -1.08
GARNL3-205ENST00000435213 KBTBD12Q3ZCT8 623 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 Q4G0T1 1027 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 PPP1R42Q7Z4L9 355 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 CCDC125Q86Z20 511 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 LRRC8AQ8IWT6 810 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 DHRS1Q96LJ7 313 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 SWAP70Q9UH65 585 aa8.27□□□□□ -1.08
GARNL3-205ENST00000435213 PDLIM1O00151 329 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 MYO1BO43795 1136 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 YY1P25490 414 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 NECTIN1Q15223 517 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 SNCBQ16143 134 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 TLDC1Q6P9B6 456 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 TMEM110Q86TL2 294 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 CKAP2LQ8IYA6 745 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 TRIM58Q8NG06 486 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 LEO1Q8WVC0 666 aaPredicted RBP8.27□□□□□ -1.09
GARNL3-205ENST00000435213 MTRQ99707 1265 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 PARD6BQ9BYG5 372 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 DNAAF2Q9NVR5 837 aaKnown RBP8.27□□□□□ -1.09
GARNL3-205ENST00000435213 SPG7Q9UQ90 795 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 WDR37Q9Y2I8 494 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 KDM3BQ7LBC6 1761 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 CCDC151A5D8V7 595 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 HARSP12081 509 aaKnown RBP8.27□□□□□ -1.09
GARNL3-205ENST00000435213 CPA1P15085 419 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 E2F5Q15329 346 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 ADCK5Q3MIX3 580 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 PRPF40BQ6NWY9 871 aaKnown RBP8.27□□□□□ -1.09
GARNL3-205ENST00000435213 CCAR2Q8N163 923 aaKnown RBP8.27□□□□□ -1.09
GARNL3-205ENST00000435213 JAKMIP2Q96AA8 810 aa8.27□□□□□ -1.09
GARNL3-205ENST00000435213 FAM163AQ96GL9 167 aaPredicted RBP8.27□□□□□ -1.09
GARNL3-205ENST00000435213 PAPOLBQ9NRJ5 636 aaKnown RBP8.27□□□□□ -1.09
GARNL3-205ENST00000435213 USP6P35125 1406 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 SBNO1A3KN83 1393 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 ATXN2Q99700 1313 aaKnown RBP8.26□□□□□ -1.09
GARNL3-205ENST00000435213 HIP1O00291 1037 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 MAP2K7O14733 419 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 CREB3O43889 395 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 VIL1P09327 827 aaKnown RBP8.26□□□□□ -1.09
GARNL3-205ENST00000435213 STIP1P31948 543 aaKnown RBP8.26□□□□□ -1.09
GARNL3-205ENST00000435213 SLC4A8Q2Y0W8 1093 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 CCDC144BQ3MJ40 725 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 ZNF394Q53GI3 561 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 B4GALNT4Q76KP1 1039 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 TMC6Q7Z403 805 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 CCDC144CPQ8IYA2 1237 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 GBP7Q8N8V2 638 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-205ENST00000435213 CCDC150Q8NCX0 1101 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 ZFAND2BQ8WV99 257 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 GPATCH3Q96I76 525 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 ITM2BQ9Y287 266 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-205ENST00000435213 FAN1Q9Y2M0 1017 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 FLT4P35916 1363 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 DESP17661 470 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 EIF4BP23588 611 aaKnown RBP8.26□□□□□ -1.09
GARNL3-205ENST00000435213 MAGEA10P43363 369 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-205ENST00000435213 SMTNP53814 917 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 PTH1RQ03431 593 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 SF3B2Q13435 895 aaKnown RBP8.26□□□□□ -1.09
GARNL3-205ENST00000435213 POSTNQ15063 836 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 LONRF2Q1L5Z9 754 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 CCDC38Q502W7 563 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 CUL5Q93034 780 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 TRIM11Q96F44 468 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 PDE11AQ9HCR9 933 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 SNRKQ9NRH2 765 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 HDAC6Q9UBN7 1215 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 TPCN1Q9ULQ1 816 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 PCDHGC5Q9Y5F6 944 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 IGSF1Q8N6C5 1336 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 NCKAP5LQ9HCH0 1330 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 TADA3O75528 432 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 EVCP57679 992 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 SOGA3Q5TF21 947 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 TXNDC2Q86VQ3 553 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 ATP11CQ8NB49 1132 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 GORASP1Q9BQQ3 440 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 GBP3Q9H0R5 595 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 DNAJC25Q9H1X3 360 aa8.26□□□□□ -1.09
GARNL3-205ENST00000435213 BICC1Q9H694 974 aaKnown RBP8.26□□□□□ -1.09
GARNL3-205ENST00000435213 BARX2Q9UMQ3 279 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-205ENST00000435213 PRR36Q9H6K5 1346 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 GNL2Q13823 731 aaKnown RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 STX1AQ16623 288 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 LRRFIP1Q32MZ4 808 aaKnown RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 CREB3L3Q68CJ9 461 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 MTHFD1LQ6UB35 978 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms