RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 IQCB1Q15051 598 aa19.35■□□□□ 0.69
LIMK1-203ENST00000435201 SPTY2D1Q68D10 685 aaPredicted RBP19.35■□□□□ 0.69
LIMK1-203ENST00000435201 NBPF11Q86T75 865 aa19.35■□□□□ 0.69
LIMK1-203ENST00000435201 CRACR2BQ8N4Y2 399 aaPredicted RBP19.35■□□□□ 0.69
LIMK1-203ENST00000435201 IRS2Q9Y4H2 1338 aa19.34■□□□□ 0.69
LIMK1-203ENST00000435201 MYH2Q9UKX2 1941 aa19.34■□□□□ 0.69
LIMK1-203ENST00000435201 MMP1P03956 469 aa19.34■□□□□ 0.69
LIMK1-203ENST00000435201 PLA2G4DQ86XP0 818 aa19.34■□□□□ 0.69
LIMK1-203ENST00000435201 CCDC24Q8N4L8 307 aa19.34■□□□□ 0.69
LIMK1-203ENST00000435201 PIBF1Q8WXW3 757 aa19.34■□□□□ 0.69
LIMK1-203ENST00000435201 ZSCAN10Q96SZ4 725 aaPredicted RBP19.34■□□□□ 0.69
LIMK1-203ENST00000435201 NAT10Q9H0A0 1025 aaKnown RBP19.34■□□□□ 0.69
LIMK1-203ENST00000435201 ONECUT3O60422 494 aaPredicted RBP19.33■□□□□ 0.69
LIMK1-203ENST00000435201 ZNF75DP51815 510 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 TERF1P54274 439 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 GRAPQ13588 217 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 PTPAQ15257 358 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 CTR9Q6PD62 1173 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 C11orf57Q6ZUT1 292 aaPredicted RBP19.33■□□□□ 0.69
LIMK1-203ENST00000435201 IQCA1Q86XH1 822 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 NOSTRINQ8IVI9 506 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 CEP57L1Q8IYX8 460 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 GRAPLQ8TC17 118 aaPredicted RBP19.33■□□□□ 0.69
LIMK1-203ENST00000435201 NUP133Q8WUM0 1156 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 TIGD1Q96MW7 591 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 MAP3K14Q99558 947 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 TRIM5Q9C035 493 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 TTC12Q9H892 705 aaPredicted RBP19.33■□□□□ 0.69
LIMK1-203ENST00000435201 ATP8A2Q9NTI2 1148 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 LEMD3Q9Y2U8 911 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 MYH6P13533 1939 aa19.33■□□□□ 0.69
LIMK1-203ENST00000435201 PFKFB1P16118 471 aa19.33■□□□□ 0.68
LIMK1-203ENST00000435201 CHAF1AQ13111 956 aaPredicted RBP19.33■□□□□ 0.68
LIMK1-203ENST00000435201 SARM1Q6SZW1 724 aa19.33■□□□□ 0.68
LIMK1-203ENST00000435201 FAM196AQ6ZSG2 479 aa19.33■□□□□ 0.68
LIMK1-203ENST00000435201 CNBD1Q8NA66 436 aa19.33■□□□□ 0.68
LIMK1-203ENST00000435201 RNF26Q9BY78 433 aaPredicted RBP19.33■□□□□ 0.68
LIMK1-203ENST00000435201 FOXP1Q9H334 677 aaPredicted RBP19.33■□□□□ 0.68
LIMK1-203ENST00000435201 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.33■□□□□ 0.68
LIMK1-203ENST00000435201 WDHD1O75717 1129 aaPredicted RBP19.32■□□□□ 0.68
LIMK1-203ENST00000435201 ZNF202O95125 648 aa19.32■□□□□ 0.68
LIMK1-203ENST00000435201 SLC3A2P08195 630 aaKnown RBP19.32■□□□□ 0.68
LIMK1-203ENST00000435201 CALM1P0DP23 149 aa19.32■□□□□ 0.68
LIMK1-203ENST00000435201 CALM2P0DP24 149 aa19.32■□□□□ 0.68
LIMK1-203ENST00000435201 CALM3P0DP25 149 aa19.32■□□□□ 0.68
LIMK1-203ENST00000435201 NFIXQ14938 502 aa19.32■□□□□ 0.68
LIMK1-203ENST00000435201 ZRSR1Q15695 479 aaKnown RBP19.32■□□□□ 0.68
LIMK1-203ENST00000435201 MPNDQ8N594 471 aa19.32■□□□□ 0.68
LIMK1-203ENST00000435201 ENAHQ8N8S7 591 aaPredicted RBP19.32■□□□□ 0.68
LIMK1-203ENST00000435201 ZNF830Q96NB3 372 aaPredicted RBP19.32■□□□□ 0.68
LIMK1-203ENST00000435201 BCL11BQ9C0K0 894 aaPredicted RBP19.32■□□□□ 0.68
LIMK1-203ENST00000435201 RBM28Q9NW13 759 aaKnown RBP19.32■□□□□ 0.68
LIMK1-203ENST00000435201 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
LIMK1-203ENST00000435201 KIAA1468Q9P260 1216 aa19.32■□□□□ 0.68
LIMK1-203ENST00000435201 ARPP21Q9UBL0 812 aaPredicted RBP19.32■□□□□ 0.68
LIMK1-203ENST00000435201 FAM237AA0A1B0GTK4 181 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 ORC4O43929 436 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 CDC25BP30305 580 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 GUCY1A2P33402 732 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 IFIT1BQ5T764 474 aaKnown RBP19.31■□□□□ 0.68
LIMK1-203ENST00000435201 CATIPQ7Z7H3 387 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 SPC24Q8NBT2 197 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 AATFQ9NY61 560 aaKnown RBP eCLIP19.31■□□□□ 0.68
LIMK1-203ENST00000435201 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.31■□□□□ 0.68
LIMK1-203ENST00000435201 MROH7-TTC4A0A0A0MT08 1334 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 AFF2P51816 1311 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 CYP2D7A0A087X1C5 515 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 BECN2A8MW95 431 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 USP17L12C9JPN9 530 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 USP17L21D6R901 530 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 CUTAO60888 179 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 MARCKSP29966 332 aaPredicted RBP19.31■□□□□ 0.68
LIMK1-203ENST00000435201 PRDX5P30044 214 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 SBK1Q52WX2 424 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 UBR3Q6ZT12 1888 aa19.31■□□□□ 0.68
LIMK1-203ENST00000435201 DIS3L2Q8IYB7 885 aaKnown RBP19.31■□□□□ 0.68
LIMK1-203ENST00000435201 DCP1AQ9NPI6 582 aaPredicted RBP19.31■□□□□ 0.68
LIMK1-203ENST00000435201 UBE2Q2LH0YL09 131 aa19.3■□□□□ 0.68
LIMK1-203ENST00000435201 DDAH1O94760 285 aa19.3■□□□□ 0.68
LIMK1-203ENST00000435201 TPM2P07951 284 aa19.3■□□□□ 0.68
LIMK1-203ENST00000435201 NT5C2P49902 561 aa19.3■□□□□ 0.68
LIMK1-203ENST00000435201 AKAP17AQ02040 695 aaKnown RBP19.3■□□□□ 0.68
LIMK1-203ENST00000435201 RILPL1Q5EBL4 403 aa19.3■□□□□ 0.68
LIMK1-203ENST00000435201 DZIP1Q86YF9 867 aaKnown RBP19.3■□□□□ 0.68
LIMK1-203ENST00000435201 WDR66Q8TBY9 1149 aa19.3■□□□□ 0.68
LIMK1-203ENST00000435201 ANKIB1Q9P2G1 1089 aa19.3■□□□□ 0.68
LIMK1-203ENST00000435201 TRPC5Q9UL62 973 aaPredicted RBP19.3■□□□□ 0.68
LIMK1-203ENST00000435201 HPSEQ9Y251 543 aa19.3■□□□□ 0.68
LIMK1-203ENST00000435201 XDHP47989 1333 aa19.3■□□□□ 0.68
LIMK1-203ENST00000435201 XBP1P17861 261 aa19.29■□□□□ 0.68
LIMK1-203ENST00000435201 SYKP43405 635 aa19.29■□□□□ 0.68
LIMK1-203ENST00000435201 RESP18Q5W5W9 173 aa19.29■□□□□ 0.68
LIMK1-203ENST00000435201 BPIFA3Q9BQP9 254 aa19.29■□□□□ 0.68
LIMK1-203ENST00000435201 TAOK2Q9UL54 1235 aa19.29■□□□□ 0.68
LIMK1-203ENST00000435201 BTBD18B2RXH4 712 aa19.28■□□□□ 0.68
LIMK1-203ENST00000435201 RBM6P78332 1123 aaKnown RBP19.28■□□□□ 0.68
LIMK1-203ENST00000435201 TXNRD3Q86VQ6 643 aa19.28■□□□□ 0.68
LIMK1-203ENST00000435201 DHX40Q8IX18 779 aaKnown RBP19.28■□□□□ 0.68
LIMK1-203ENST00000435201 DRC7Q8IY82 874 aa19.28■□□□□ 0.68
LIMK1-203ENST00000435201 SEPT12Q8IYM1 358 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms