RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 ZNF512BQ96KM6 892 aaPredicted RBP18.23■□□□□ 0.51
RPUSD3-208ENST00000433972 AS3MTQ9HBK9 375 aa18.23■□□□□ 0.51
RPUSD3-208ENST00000433972 PI4KBQ9UBF8 816 aa18.23■□□□□ 0.51
RPUSD3-208ENST00000433972 BIN2Q9UBW5 565 aaPredicted RBP18.23■□□□□ 0.51
RPUSD3-208ENST00000433972 SURF6O75683 361 aaKnown RBP18.22■□□□□ 0.51
RPUSD3-208ENST00000433972 MYCP01106 439 aaPredicted RBP18.22■□□□□ 0.51
RPUSD3-208ENST00000433972 CERS3Q8IU89 383 aa18.22■□□□□ 0.51
RPUSD3-208ENST00000433972 ITPRIPQ8IWB1 547 aa18.22■□□□□ 0.51
RPUSD3-208ENST00000433972 TNNQ9UQP3 1299 aa18.22■□□□□ 0.51
RPUSD3-208ENST00000433972 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.22■□□□□ 0.51
RPUSD3-208ENST00000433972 ECM2O94769 699 aaPredicted RBP18.21■□□□□ 0.51
RPUSD3-208ENST00000433972 CTGFP29279 349 aa18.21■□□□□ 0.51
RPUSD3-208ENST00000433972 PRKCZQ05513 592 aa18.21■□□□□ 0.51
RPUSD3-208ENST00000433972 ZNF280CQ8ND82 737 aa18.21■□□□□ 0.51
RPUSD3-208ENST00000433972 TRIM34Q9BYJ4 488 aa18.21■□□□□ 0.51
RPUSD3-208ENST00000433972 RCAN3Q9UKA8 241 aa18.21■□□□□ 0.51
RPUSD3-208ENST00000433972 USP17L5A8MUK1 530 aa18.2■□□□□ 0.5
RPUSD3-208ENST00000433972 TNPO2O14787 897 aaKnown RBP18.2■□□□□ 0.5
RPUSD3-208ENST00000433972 CAP2P40123 477 aa18.2■□□□□ 0.5
RPUSD3-208ENST00000433972 GCLCP48506 637 aaPredicted RBP18.2■□□□□ 0.5
RPUSD3-208ENST00000433972 PPP4CP60510 307 aa18.2■□□□□ 0.5
RPUSD3-208ENST00000433972 TMED8Q6PL24 325 aaPredicted RBP18.2■□□□□ 0.5
RPUSD3-208ENST00000433972 COA7Q96BR5 231 aa18.2■□□□□ 0.5
RPUSD3-208ENST00000433972 GINM1Q9NU53 330 aa18.2■□□□□ 0.5
RPUSD3-208ENST00000433972 NOP58Q9Y2X3 529 aaKnown RBP18.2■□□□□ 0.5
RPUSD3-208ENST00000433972 GJB1P08034 283 aa18.19■□□□□ 0.5
RPUSD3-208ENST00000433972 GJA8P48165 433 aa18.19■□□□□ 0.5
RPUSD3-208ENST00000433972 FAM110CQ1W6H9 321 aa18.19■□□□□ 0.5
RPUSD3-208ENST00000433972 PXYLP1Q8TE99 480 aa18.19■□□□□ 0.5
RPUSD3-208ENST00000433972 SH3RF3Q8TEJ3 882 aaPredicted RBP18.19■□□□□ 0.5
RPUSD3-208ENST00000433972 DBNDD2Q9BQY9 259 aa18.19■□□□□ 0.5
RPUSD3-208ENST00000433972 AATFQ9NY61 560 aaKnown RBP eCLIP18.19■□□□□ 0.5
RPUSD3-208ENST00000433972 DOCK1Q14185 1865 aa18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 ASNSP08243 561 aa18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 CCL5P13501 91 aa18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 SPP2Q13103 211 aa18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 IRF5Q13568 498 aa18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 HABP4Q5JVS0 413 aaKnown RBP18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 ERC1Q8IUD2 1116 aa18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 FOXP4Q8IVH2 680 aaPredicted RBP18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 CRACR2BQ8N4Y2 399 aaPredicted RBP18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 RNF208Q9H0X6 261 aa18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 SNRKQ9NRH2 765 aa18.18■□□□□ 0.5
RPUSD3-208ENST00000433972 FAM196BA6NMK8 535 aa18.17■□□□□ 0.5
RPUSD3-208ENST00000433972 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
RPUSD3-208ENST00000433972 ADCY3O60266 1144 aa18.17■□□□□ 0.5
RPUSD3-208ENST00000433972 CYP2E1P05181 493 aaPredicted RBP18.17■□□□□ 0.5
RPUSD3-208ENST00000433972 MTFR1Q15390 333 aa18.17■□□□□ 0.5
RPUSD3-208ENST00000433972 HSP90AB4PQ58FF6 505 aa18.17■□□□□ 0.5
RPUSD3-208ENST00000433972 HTATIP2Q9BUP3 242 aa18.17■□□□□ 0.5
RPUSD3-208ENST00000433972 FLT1P17948 1338 aa18.17■□□□□ 0.5
RPUSD3-208ENST00000433972 KIAA0100Q14667 2235 aaKnown RBP18.17■□□□□ 0.5
RPUSD3-208ENST00000433972 FLT3LGP49771 235 aa18.16■□□□□ 0.5
RPUSD3-208ENST00000433972 SH3D19Q5HYK7 790 aa18.16■□□□□ 0.5
RPUSD3-208ENST00000433972 ANKRD13CQ8N6S4 541 aa18.16■□□□□ 0.5
RPUSD3-208ENST00000433972 TGFBRAP1Q8WUH2 860 aa18.16■□□□□ 0.5
RPUSD3-208ENST00000433972 WDR18Q9BV38 432 aa18.16■□□□□ 0.5
RPUSD3-208ENST00000433972 C1orf115Q9H7X2 142 aa18.16■□□□□ 0.5
RPUSD3-208ENST00000433972 TMOD4Q9NZQ9 345 aa18.16■□□□□ 0.5
RPUSD3-208ENST00000433972 SLURP2P0DP57 97 aa18.15■□□□□ 0.5
RPUSD3-208ENST00000433972 ZAP70P43403 619 aa18.15■□□□□ 0.5
RPUSD3-208ENST00000433972 HMGCS2P54868 508 aa18.15■□□□□ 0.5
RPUSD3-208ENST00000433972 TREML2Q5T2D2 321 aa18.15■□□□□ 0.5
RPUSD3-208ENST00000433972 CCDC84Q86UT8 332 aaPredicted RBP18.15■□□□□ 0.5
RPUSD3-208ENST00000433972 MAPKAPK5Q8IW41 473 aa18.15■□□□□ 0.5
RPUSD3-208ENST00000433972 GABRQQ9UN88 632 aa18.15■□□□□ 0.5
RPUSD3-208ENST00000433972 MAST2Q6P0Q8 1798 aa18.14■□□□□ 0.5
RPUSD3-208ENST00000433972 C19orf81C9J6K1 198 aa18.14■□□□□ 0.49
RPUSD3-208ENST00000433972 IRX3P78415 501 aaPredicted RBP18.14■□□□□ 0.49
RPUSD3-208ENST00000433972 METTL16Q86W50 562 aaKnown RBP18.14■□□□□ 0.49
RPUSD3-208ENST00000433972 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.14■□□□□ 0.49
RPUSD3-208ENST00000433972 DBNLQ9UJU6 430 aaKnown RBP18.14■□□□□ 0.49
RPUSD3-208ENST00000433972 ZSWIM8A7E2V4 1837 aa18.14■□□□□ 0.49
RPUSD3-208ENST00000433972 IDH1O75874 414 aaKnown RBP18.13■□□□□ 0.49
RPUSD3-208ENST00000433972 CYP7A1P22680 504 aa18.13■□□□□ 0.49
RPUSD3-208ENST00000433972 BACE1P56817 501 aa18.13■□□□□ 0.49
RPUSD3-208ENST00000433972 MAP3K12Q12852 859 aa18.13■□□□□ 0.49
RPUSD3-208ENST00000433972 U2AF1L4Q8WU68 220 aaKnown RBP18.13■□□□□ 0.49
RPUSD3-208ENST00000433972 GTF3C2Q8WUA4 911 aaPredicted RBP18.13■□□□□ 0.49
RPUSD3-208ENST00000433972 DPF3Q92784 378 aa18.13■□□□□ 0.49
RPUSD3-208ENST00000433972 SHISA4Q96DD7 197 aa18.13■□□□□ 0.49
RPUSD3-208ENST00000433972 CHMP4BQ9H444 224 aaKnown RBP18.13■□□□□ 0.49
RPUSD3-208ENST00000433972 SGPL1O95470 568 aa18.12■□□□□ 0.49
RPUSD3-208ENST00000433972 INHAP05111 366 aa18.12■□□□□ 0.49
RPUSD3-208ENST00000433972 MTMR2Q13614 643 aa18.12■□□□□ 0.49
RPUSD3-208ENST00000433972 CEP85Q6P2H3 762 aa18.12■□□□□ 0.49
RPUSD3-208ENST00000433972 CCDC8Q9H0W5 538 aaPredicted RBP18.12■□□□□ 0.49
RPUSD3-208ENST00000433972 ASCC2Q9H1I8 757 aaPredicted RBP18.12■□□□□ 0.49
RPUSD3-208ENST00000433972 TAOK2Q9UL54 1235 aa18.12■□□□□ 0.49
RPUSD3-208ENST00000433972 USP17L10C9JJH3 530 aa18.11■□□□□ 0.49
RPUSD3-208ENST00000433972 FARP2O94887 1054 aaPredicted RBP18.11■□□□□ 0.49
RPUSD3-208ENST00000433972 RLBP1P12271 317 aa18.11■□□□□ 0.49
RPUSD3-208ENST00000433972 HOXA7P31268 230 aaPredicted RBP18.11■□□□□ 0.49
RPUSD3-208ENST00000433972 USP5P45974 858 aa18.11■□□□□ 0.49
RPUSD3-208ENST00000433972 TTF1Q15361 905 aaPredicted RBP18.11■□□□□ 0.49
RPUSD3-208ENST00000433972 EAF2Q96CJ1 260 aaPredicted RBP18.11■□□□□ 0.49
RPUSD3-208ENST00000433972 PIH1D3Q9NQM4 214 aaKnown RBP18.11■□□□□ 0.49
RPUSD3-208ENST00000433972 PALD1Q9ULE6 856 aa18.11■□□□□ 0.49
RPUSD3-208ENST00000433972 NR2E3Q9Y5X4 410 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms