RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 ZNF384Q8TF68 577 aa21.64■■□□□ 1.05
CNOT9-204ENST00000432877 DEFB118Q96PH6 123 aa21.64■■□□□ 1.05
CNOT9-204ENST00000432877 CRISPLD2Q9H0B8 497 aa21.64■■□□□ 1.05
CNOT9-204ENST00000432877 HERC5Q9UII4 1024 aaKnown RBP21.64■■□□□ 1.05
CNOT9-204ENST00000432877 COL2A1P02458 1487 aaPredicted RBP21.64■■□□□ 1.05
CNOT9-204ENST00000432877 USP17L5A8MUK1 530 aa21.63■■□□□ 1.05
CNOT9-204ENST00000432877 EVI5O60447 810 aa21.63■■□□□ 1.05
CNOT9-204ENST00000432877 IGSF3O75054 1194 aa21.63■■□□□ 1.05
CNOT9-204ENST00000432877 UQCRFS1P1P0C7P4 283 aa21.63■■□□□ 1.05
CNOT9-204ENST00000432877 SLURP2P0DP57 97 aa21.63■■□□□ 1.05
CNOT9-204ENST00000432877 ARID4AP29374 1257 aaPredicted RBP21.63■■□□□ 1.05
CNOT9-204ENST00000432877 CAP2P40123 477 aa21.63■■□□□ 1.05
CNOT9-204ENST00000432877 TREML2Q5T2D2 321 aa21.63■■□□□ 1.05
CNOT9-204ENST00000432877 AS3MTQ9HBK9 375 aa21.63■■□□□ 1.05
CNOT9-204ENST00000432877 RAI14Q9P0K7 980 aa21.63■■□□□ 1.05
CNOT9-204ENST00000432877 G3BP1Q13283 466 aaKnown RBP eCLIP21.62■■□□□ 1.05
CNOT9-204ENST00000432877 SH3D19Q5HYK7 790 aa21.62■■□□□ 1.05
CNOT9-204ENST00000432877 NOL10Q9BSC4 688 aaKnown RBP21.62■■□□□ 1.05
CNOT9-204ENST00000432877 DHX36Q9H2U1 1008 aaKnown RBP21.62■■□□□ 1.05
CNOT9-204ENST00000432877 PI4KBQ9UBF8 816 aa21.62■■□□□ 1.05
CNOT9-204ENST00000432877 CEP290O15078 2479 aa21.61■■□□□ 1.05
CNOT9-204ENST00000432877 GNAI2P04899 355 aa21.61■■□□□ 1.05
CNOT9-204ENST00000432877 PLCG2P16885 1265 aa21.61■■□□□ 1.05
CNOT9-204ENST00000432877 ANKLE1Q8NAG6 615 aa21.61■■□□□ 1.05
CNOT9-204ENST00000432877 LRP2BPQ9P2M1 347 aa21.61■■□□□ 1.05
CNOT9-204ENST00000432877 BAG3O95817 575 aa21.6■■□□□ 1.05
CNOT9-204ENST00000432877 TBC1D9Q6ZT07 1266 aa21.6■■□□□ 1.05
CNOT9-204ENST00000432877 NECAB2Q7Z6G3 386 aa21.6■■□□□ 1.05
CNOT9-204ENST00000432877 CCDC84Q86UT8 332 aaPredicted RBP21.6■■□□□ 1.05
CNOT9-204ENST00000432877 TEX11Q8IYF3 940 aa21.6■■□□□ 1.05
CNOT9-204ENST00000432877 WDR18Q9BV38 432 aa21.6■■□□□ 1.05
CNOT9-204ENST00000432877 GINM1Q9NU53 330 aa21.6■■□□□ 1.05
CNOT9-204ENST00000432877 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.6■■□□□ 1.05
CNOT9-204ENST00000432877 TAOK2Q9UL54 1235 aa21.6■■□□□ 1.05
CNOT9-204ENST00000432877 MYH2Q9UKX2 1941 aa21.6■■□□□ 1.05
CNOT9-204ENST00000432877 HMGCRP04035 888 aa21.59■■□□□ 1.05
CNOT9-204ENST00000432877 HMGCS2P54868 508 aa21.59■■□□□ 1.05
CNOT9-204ENST00000432877 ASCC2Q9H1I8 757 aaPredicted RBP21.59■■□□□ 1.05
CNOT9-204ENST00000432877 GJD2Q9UKL4 321 aa21.59■■□□□ 1.05
CNOT9-204ENST00000432877 TRIOBPQ9H2D6 2365 aa21.58■■□□□ 1.05
CNOT9-204ENST00000432877 DOCK2Q92608 1830 aa21.58■■□□□ 1.05
CNOT9-204ENST00000432877 FAM196BA6NMK8 535 aa21.58■■□□□ 1.05
CNOT9-204ENST00000432877 PPP4CP60510 307 aa21.58■■□□□ 1.05
CNOT9-204ENST00000432877 FOXP4Q8IVH2 680 aaPredicted RBP21.58■■□□□ 1.05
CNOT9-204ENST00000432877 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.58■■□□□ 1.05
CNOT9-204ENST00000432877 GPR108Q9NPR9 543 aa21.58■■□□□ 1.05
CNOT9-204ENST00000432877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.58■■□□□ 1.05
CNOT9-204ENST00000432877 RPTORQ8N122 1335 aa21.57■■□□□ 1.04
CNOT9-204ENST00000432877 C19orf81C9J6K1 198 aa21.57■■□□□ 1.04
CNOT9-204ENST00000432877 ASNSP08243 561 aa21.57■■□□□ 1.04
CNOT9-204ENST00000432877 HOXA7P31268 230 aaPredicted RBP21.57■■□□□ 1.04
CNOT9-204ENST00000432877 MCAMP43121 646 aa21.57■■□□□ 1.04
CNOT9-204ENST00000432877 PI16Q6UXB8 463 aa21.57■■□□□ 1.04
CNOT9-204ENST00000432877 PAWRQ96IZ0 340 aaKnown RBP21.57■■□□□ 1.04
CNOT9-204ENST00000432877 HMX1Q9NP08 348 aaPredicted RBP21.57■■□□□ 1.04
CNOT9-204ENST00000432877 MORF4L1Q9UBU8 362 aa21.57■■□□□ 1.04
CNOT9-204ENST00000432877 BACE1P56817 501 aa21.56■■□□□ 1.04
CNOT9-204ENST00000432877 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
CNOT9-204ENST00000432877 ATF7IPQ6VMQ6 1270 aa21.56■■□□□ 1.04
CNOT9-204ENST00000432877 METTL16Q86W50 562 aaKnown RBP21.56■■□□□ 1.04
CNOT9-204ENST00000432877 TMOD4Q9NZQ9 345 aa21.56■■□□□ 1.04
CNOT9-204ENST00000432877 TRIM27P14373 513 aa21.55■■□□□ 1.04
CNOT9-204ENST00000432877 IRX3P78415 501 aaPredicted RBP21.55■■□□□ 1.04
CNOT9-204ENST00000432877 RRP1BQ14684 758 aaKnown RBP21.55■■□□□ 1.04
CNOT9-204ENST00000432877 CCDC158Q5M9N0 1113 aa21.55■■□□□ 1.04
CNOT9-204ENST00000432877 SH3RF3Q8TEJ3 882 aaPredicted RBP21.55■■□□□ 1.04
CNOT9-204ENST00000432877 DOCK1Q14185 1865 aa21.54■■□□□ 1.04
CNOT9-204ENST00000432877 BMP8BP34820 402 aa21.54■■□□□ 1.04
CNOT9-204ENST00000432877 TRMT44Q8IYL2 757 aaKnown RBP21.54■■□□□ 1.04
CNOT9-204ENST00000432877 GPRC5AQ8NFJ5 357 aa21.54■■□□□ 1.04
CNOT9-204ENST00000432877 GTF3C2Q8WUA4 911 aaPredicted RBP21.54■■□□□ 1.04
CNOT9-204ENST00000432877 NBPF3Q9H094 633 aa21.54■■□□□ 1.04
CNOT9-204ENST00000432877 MGAMO43451 1857 aa21.54■■□□□ 1.04
CNOT9-204ENST00000432877 PNMA6EA0A0J9YXQ4 647 aa21.53■■□□□ 1.04
CNOT9-204ENST00000432877 XRCC5P13010 732 aaKnown RBP21.53■■□□□ 1.04
CNOT9-204ENST00000432877 TTC39AQ5SRH9 613 aa21.53■■□□□ 1.04
CNOT9-204ENST00000432877 ZNF512BQ96KM6 892 aaPredicted RBP21.53■■□□□ 1.04
CNOT9-204ENST00000432877 TRIM34Q9BYJ4 488 aa21.53■■□□□ 1.04
CNOT9-204ENST00000432877 AATFQ9NY61 560 aaKnown RBP eCLIP21.53■■□□□ 1.04
CNOT9-204ENST00000432877 USP17L10C9JJH3 530 aa21.52■■□□□ 1.04
CNOT9-204ENST00000432877 MTMR2Q13614 643 aa21.52■■□□□ 1.04
CNOT9-204ENST00000432877 TGFBRAP1Q8WUH2 860 aa21.52■■□□□ 1.04
CNOT9-204ENST00000432877 SOCS4Q8WXH5 440 aa21.52■■□□□ 1.04
CNOT9-204ENST00000432877 P2RX7Q99572 595 aaKnown RBP21.52■■□□□ 1.04
CNOT9-204ENST00000432877 NUDT12Q9BQG2 462 aa21.52■■□□□ 1.04
CNOT9-204ENST00000432877 STAP2Q9UGK3 403 aa21.52■■□□□ 1.04
CNOT9-204ENST00000432877 RANBP2P49792 3224 aaKnown RBP21.51■■□□□ 1.03
CNOT9-204ENST00000432877 PHIPQ8WWQ0 1821 aa21.51■■□□□ 1.03
CNOT9-204ENST00000432877 CCER2I3L3R5 266 aa21.51■■□□□ 1.03
CNOT9-204ENST00000432877 MAPK4P31152 587 aa21.51■■□□□ 1.03
CNOT9-204ENST00000432877 CERS3Q8IU89 383 aa21.51■■□□□ 1.03
CNOT9-204ENST00000432877 CRACR2BQ8N4Y2 399 aaPredicted RBP21.51■■□□□ 1.03
CNOT9-204ENST00000432877 OGDHLQ9ULD0 1010 aa21.51■■□□□ 1.03
CNOT9-204ENST00000432877 HLA-DOAP06340 250 aa21.5■■□□□ 1.03
CNOT9-204ENST00000432877 HERVK_113P62684 666 aa21.5■■□□□ 1.03
CNOT9-204ENST00000432877 POLA2Q14181 598 aa21.5■■□□□ 1.03
CNOT9-204ENST00000432877 TNNI3KQ59H18 835 aa21.5■■□□□ 1.03
CNOT9-204ENST00000432877 MAP3K21Q5TCX8 1036 aa21.5■■□□□ 1.03
CNOT9-204ENST00000432877 FPGT-TNNI3KV9GXZ4 949 aa21.5■■□□□ 1.03
CNOT9-204ENST00000432877 FLT1P17948 1338 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms