RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 SH3RF3Q8TEJ3 882 aaPredicted RBP19.84■□□□□ 0.77
ACTB-205ENST00000432588 ZNF512BQ96KM6 892 aaPredicted RBP19.84■□□□□ 0.77
ACTB-205ENST00000432588 DHX36Q9H2U1 1008 aaKnown RBP19.84■□□□□ 0.77
ACTB-205ENST00000432588 C1orf115Q9H7X2 142 aa19.84■□□□□ 0.77
ACTB-205ENST00000432588 PI4KBQ9UBF8 816 aa19.84■□□□□ 0.77
ACTB-205ENST00000432588 BIN2Q9UBW5 565 aaPredicted RBP19.84■□□□□ 0.77
ACTB-205ENST00000432588 PNMA3Q9UL41 463 aa19.84■□□□□ 0.77
ACTB-205ENST00000432588 PRKCZQ05513 592 aa19.83■□□□□ 0.77
ACTB-205ENST00000432588 PROCA1Q8NCQ7 364 aaPredicted RBP19.83■□□□□ 0.77
ACTB-205ENST00000432588 NKX2-3Q8TAU0 364 aa19.83■□□□□ 0.77
ACTB-205ENST00000432588 AATFQ9NY61 560 aaKnown RBP eCLIP19.83■□□□□ 0.773e-17■□□□□ 10.5
ACTB-205ENST00000432588 PCDH10Q9P2E7 1040 aa19.83■□□□□ 0.77
ACTB-205ENST00000432588 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.83■□□□□ 0.77
ACTB-205ENST00000432588 NOP58Q9Y2X3 529 aaKnown RBP19.83■□□□□ 0.77
ACTB-205ENST00000432588 ZBTB7BO15156 539 aaPredicted RBP19.82■□□□□ 0.76
ACTB-205ENST00000432588 CAP2P40123 477 aa19.82■□□□□ 0.76
ACTB-205ENST00000432588 UBXN2AP68543 259 aa19.82■□□□□ 0.76
ACTB-205ENST00000432588 SPP2Q13103 211 aa19.82■□□□□ 0.76
ACTB-205ENST00000432588 MTFR1Q15390 333 aa19.82■□□□□ 0.76
ACTB-205ENST00000432588 CCDC84Q86UT8 332 aaPredicted RBP19.82■□□□□ 0.76
ACTB-205ENST00000432588 MIER1Q8N108 512 aa19.82■□□□□ 0.76
ACTB-205ENST00000432588 ZNF280CQ8ND82 737 aa19.82■□□□□ 0.76
ACTB-205ENST00000432588 SLAIN1Q8ND83 568 aa19.82■□□□□ 0.76
ACTB-205ENST00000432588 USP17L5A8MUK1 530 aa19.81■□□□□ 0.76
ACTB-205ENST00000432588 TNPO2O14787 897 aaKnown RBP19.81■□□□□ 0.76
ACTB-205ENST00000432588 CYP2E1P05181 493 aaPredicted RBP19.81■□□□□ 0.76
ACTB-205ENST00000432588 PPP4CP60510 307 aa19.81■□□□□ 0.76
ACTB-205ENST00000432588 PABPC4Q13310 644 aaKnown RBP eCLIP19.81■□□□□ 0.76
ACTB-205ENST00000432588 AS3MTQ9HBK9 375 aa19.81■□□□□ 0.76
ACTB-205ENST00000432588 PHIPQ8WWQ0 1821 aa19.81■□□□□ 0.76
ACTB-205ENST00000432588 PTPRFP10586 1907 aa19.8■□□□□ 0.76
ACTB-205ENST00000432588 MAST2Q6P0Q8 1798 aa19.8■□□□□ 0.76
ACTB-205ENST00000432588 RLBP1P12271 317 aa19.8■□□□□ 0.76
ACTB-205ENST00000432588 CCL5P13501 91 aa19.8■□□□□ 0.76
ACTB-205ENST00000432588 TGFBRAP1Q8WUH2 860 aa19.8■□□□□ 0.76
ACTB-205ENST00000432588 TRIM34Q9BYJ4 488 aa19.8■□□□□ 0.76
ACTB-205ENST00000432588 GJB1P08034 283 aa19.79■□□□□ 0.76
ACTB-205ENST00000432588 ZAP70P43403 619 aa19.79■□□□□ 0.76
ACTB-205ENST00000432588 TREML2Q5T2D2 321 aa19.79■□□□□ 0.76
ACTB-205ENST00000432588 DIEXFQ68CQ4 756 aaKnown RBP19.79■□□□□ 0.76
ACTB-205ENST00000432588 MAPKAPK5Q8IW41 473 aa19.79■□□□□ 0.76
ACTB-205ENST00000432588 CRACR2BQ8N4Y2 399 aaPredicted RBP19.79■□□□□ 0.76
ACTB-205ENST00000432588 ANKRD13CQ8N6S4 541 aa19.79■□□□□ 0.76
ACTB-205ENST00000432588 RNF208Q9H0X6 261 aa19.79■□□□□ 0.76
ACTB-205ENST00000432588 DBNLQ9UJU6 430 aaKnown RBP19.79■□□□□ 0.76
ACTB-205ENST00000432588 GABRQQ9UN88 632 aa19.79■□□□□ 0.76
ACTB-205ENST00000432588 FLT1P17948 1338 aa19.78■□□□□ 0.76
ACTB-205ENST00000432588 ADCY3O60266 1144 aa19.78■□□□□ 0.76
ACTB-205ENST00000432588 ASNSP08243 561 aa19.78■□□□□ 0.76
ACTB-205ENST00000432588 GJA8P48165 433 aa19.78■□□□□ 0.76
ACTB-205ENST00000432588 GCLCP48506 637 aaPredicted RBP19.78■□□□□ 0.76
ACTB-205ENST00000432588 FLT3LGP49771 235 aa19.78■□□□□ 0.76
ACTB-205ENST00000432588 HMGCS2P54868 508 aa19.78■□□□□ 0.76
ACTB-205ENST00000432588 FAM110CQ1W6H9 321 aa19.78■□□□□ 0.76
ACTB-205ENST00000432588 HABP4Q5JVS0 413 aaKnown RBP19.78■□□□□ 0.76
ACTB-205ENST00000432588 ERC1Q8IUD2 1116 aa19.78■□□□□ 0.76
ACTB-205ENST00000432588 FOXP4Q8IVH2 680 aaPredicted RBP19.78■□□□□ 0.76
ACTB-205ENST00000432588 COA7Q96BR5 231 aa19.78■□□□□ 0.76
ACTB-205ENST00000432588 IRF5Q13568 498 aa19.77■□□□□ 0.76
ACTB-205ENST00000432588 ADGRA1Q86SQ6 560 aa19.77■□□□□ 0.76
ACTB-205ENST00000432588 CERS3Q8IU89 383 aa19.77■□□□□ 0.76
ACTB-205ENST00000432588 EAF2Q96CJ1 260 aaPredicted RBP19.77■□□□□ 0.76
ACTB-205ENST00000432588 CCDC8Q9H0W5 538 aaPredicted RBP19.77■□□□□ 0.76
ACTB-205ENST00000432588 PIH1D3Q9NQM4 214 aaKnown RBP19.77■□□□□ 0.76
ACTB-205ENST00000432588 MGAMO43451 1857 aa19.77■□□□□ 0.76
ACTB-205ENST00000432588 ZBED9Q6R2W3 1325 aa19.76■□□□□ 0.75
ACTB-205ENST00000432588 IDH1O75874 414 aaKnown RBP19.76■□□□□ 0.75
ACTB-205ENST00000432588 HLA-DOAP06340 250 aa19.76■□□□□ 0.75
ACTB-205ENST00000432588 CYP7A1P22680 504 aa19.76■□□□□ 0.75
ACTB-205ENST00000432588 RRP1BQ14684 758 aaKnown RBP19.76■□□□□ 0.75
ACTB-205ENST00000432588 SH3D19Q5HYK7 790 aa19.76■□□□□ 0.75
ACTB-205ENST00000432588 CEP85Q6P2H3 762 aa19.76■□□□□ 0.75
ACTB-205ENST00000432588 PXYLP1Q8TE99 480 aa19.76■□□□□ 0.75
ACTB-205ENST00000432588 SHISA4Q96DD7 197 aa19.76■□□□□ 0.75
ACTB-205ENST00000432588 WDR18Q9BV38 432 aa19.76■□□□□ 0.75
ACTB-205ENST00000432588 GINM1Q9NU53 330 aa19.76■□□□□ 0.75
ACTB-205ENST00000432588 TLR7Q9NYK1 1049 aaKnown RBP19.76■□□□□ 0.75
ACTB-205ENST00000432588 ATAD5Q96QE3 1844 aa19.75■□□□□ 0.75
ACTB-205ENST00000432588 MS4A1P11836 297 aa19.75■□□□□ 0.75
ACTB-205ENST00000432588 HSP90AB4PQ58FF6 505 aa19.75■□□□□ 0.75
ACTB-205ENST00000432588 METTL16Q86W50 562 aaKnown RBP19.75■□□□□ 0.75
ACTB-205ENST00000432588 ASCC2Q9H1I8 757 aaPredicted RBP19.75■□□□□ 0.75
ACTB-205ENST00000432588 TMOD4Q9NZQ9 345 aa19.75■□□□□ 0.75
ACTB-205ENST00000432588 TAOK2Q9UL54 1235 aa19.75■□□□□ 0.75
ACTB-205ENST00000432588 PALD1Q9ULE6 856 aa19.75■□□□□ 0.75
ACTB-205ENST00000432588 LOC285556D6RIA3 1793 aa19.75■□□□□ 0.75
ACTB-205ENST00000432588 CEP290O15078 2479 aa19.74■□□□□ 0.75
ACTB-205ENST00000432588 ELNP15502 786 aa19.74■□□□□ 0.75
ACTB-205ENST00000432588 BACE1P56817 501 aa19.74■□□□□ 0.75
ACTB-205ENST00000432588 MTMR2Q13614 643 aa19.74■□□□□ 0.75
ACTB-205ENST00000432588 TMED8Q6PL24 325 aaPredicted RBP19.74■□□□□ 0.75
ACTB-205ENST00000432588 SAP30BPQ9UHR5 308 aaKnown RBP19.74■□□□□ 0.75
ACTB-205ENST00000432588 C19orf81C9J6K1 198 aa19.73■□□□□ 0.75
ACTB-205ENST00000432588 INHAP05111 366 aa19.73■□□□□ 0.75
ACTB-205ENST00000432588 CAPN2P17655 700 aa19.73■□□□□ 0.75
ACTB-205ENST00000432588 DYNLL1P63167 89 aaKnown RBP19.73■□□□□ 0.75
ACTB-205ENST00000432588 IRX3P78415 501 aaPredicted RBP19.73■□□□□ 0.75
ACTB-205ENST00000432588 MAP3K12Q12852 859 aa19.73■□□□□ 0.75
ACTB-205ENST00000432588 AACSQ86V21 672 aa19.73■□□□□ 0.75
ACTB-205ENST00000432588 PANK1Q8TE04 598 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms