RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 KIAA1211Q6ZU35 1233 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 SMG8Q8ND04 991 aaKnown RBP4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 MICAL1Q8TDZ2 1067 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 ACSF2Q96CM8 615 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 DEPDC7Q96QD5 511 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 WNT10AQ9GZT5 417 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 GMIPQ9P107 970 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 PPP1R9AQ9ULJ8 1098 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 HIF3AQ9Y2N7 669 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 TMA7Q9Y2S6 64 aaKnown RBP4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 DCDC2CA8MYV0 355 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 FANCGO15287 622 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 NME1P15531 152 aaKnown RBP4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 GUCY2CP25092 1073 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 SNRPNP63162 240 aaKnown RBP4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 HNRNPUQ00839 825 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 ID3Q02535 119 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 RASGRF1Q13972 1273 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 PDE3AQ14432 1141 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 ZBTB37Q5TC79 503 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 TREML4Q6UXN2 200 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 ATG4CQ96DT6 458 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 ACSBG1Q96GR2 724 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 CRBNQ96SW2 442 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 USP26Q9BXU7 913 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 DISC1Q9NRI5 854 aa4.77□□□□□ -1.65
HMGB1P27-201ENST00000431429 LTBP3Q9NS15 1303 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 WIPF1O43516 503 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 NEFMP07197 916 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 AMPD1P23109 780 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 GRK4P32298 578 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 PDE4BQ07343 736 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 MRM1Q6IN84 353 aaKnown RBP4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 Q6ZS46 218 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 NLRC3Q7RTR2 1065 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 TTC6Q86TZ1 520 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 C12orf40Q86WS4 652 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 MCATQ8IVS2 390 aaKnown RBP4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 MRPL41Q8IXM3 137 aaKnown RBP4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 SLFN12Q8IYM2 578 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 TMEM130Q8N3G9 435 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 RNF214Q8ND24 703 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 ELMO3Q96BJ8 720 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 ZNF669Q96BR6 464 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 ZNF775Q96BV0 537 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 MRFAP1L1Q96HT8 127 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 RNPC3Q96LT9 517 aaKnown RBP4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 FANCD2OSQ96PS1 177 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 PUS7Q96PZ0 661 aaKnown RBP4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 TRIM55Q9BYV6 548 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 TJP2Q9UDY2 1190 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 MAPK8IP1Q9UQF2 711 aa4.76□□□□□ -1.65
HMGB1P27-201ENST00000431429 GNB5O14775 395 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 SLFN14P0C7P3 912 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 ADH5P11766 374 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 ELNP15502 786 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 PLCG1P19174 1290 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 ZYXQ15942 572 aaKnown RBP4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 FXNQ16595 210 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 PPM1JQ5JR12 505 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 TRAPPC3LQ5T215 181 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 IGF2-ASQ6U949 168 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 UNC5AQ6ZN44 842 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 ZSCAN1Q8NBB4 408 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 SRPK1Q96SB4 655 aaKnown RBP4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 SLC9A7Q96T83 725 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 RNF208Q9H0X6 261 aa4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 MRPL42Q9Y6G3 142 aaKnown RBP4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 COL17A1Q9UMD9 1497 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P27-201ENST00000431429 CHURC1-FNTBB4DL54 471 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 PDPK1O15530 556 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 GJB6O95452 261 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 PGRP06401 933 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 CCNFP41002 786 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 RAC1P63000 192 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 SOX4Q06945 474 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 SLBPQ14493 270 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 TCEAL1Q15170 157 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 DUOXA2Q1HG44 320 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 FBXW10Q5XX13 1052 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 ZNF662Q6ZS27 426 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 UBE3DQ7Z6J8 389 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 LILRB2Q8N423 598 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 C2CD4AQ8NCU7 369 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 KLHL6Q8WZ60 621 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 RUSC1Q9BVN2 902 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 PLVAPQ9BX97 442 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 MRPL18Q9H0U6 180 aaKnown RBP4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 FBRSQ9HAH7 460 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 ENAMQ9NRM1 1142 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 SLC12A7Q9Y666 1083 aa4.74□□□□□ -1.65
HMGB1P27-201ENST00000431429 PRAMEF27A3QJZ7 478 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 B2RBV5 119 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 F8W735 103 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 U2SURPO15042 1029 aaKnown RBP4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 HSD3B2P26439 372 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 NKG7Q16617 165 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 PLEKHG4Q58EX7 1191 aa4.73□□□□□ -1.65
HMGB1P27-201ENST00000431429 SLC6A19Q695T7 634 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms