RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 PPP6R2O75170 966 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 WDHD1O75717 1129 aaPredicted RBP16.18■□□□□ 0.18
HOXC4-202ENST00000430889 RFC4P35249 363 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 FUT2Q10981 343 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 GRAPQ13588 217 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 SYNE3Q6ZMZ3 975 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 C11orf57Q6ZUT1 292 aaPredicted RBP16.18■□□□□ 0.18
HOXC4-202ENST00000430889 PLA2G4DQ86XP0 818 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 CRACR2BQ8N4Y2 399 aaPredicted RBP16.18■□□□□ 0.18
HOXC4-202ENST00000430889 GRAPLQ8TC17 118 aaPredicted RBP16.18■□□□□ 0.18
HOXC4-202ENST00000430889 WASF1Q92558 559 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 HPSEQ9Y251 543 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 TNKSO95271 1327 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 CYP2D7A0A087X1C5 515 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 A0A1B0GVL5 298 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 MINDY4BA8MYZ0 360 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 ORC4O43929 436 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 MMP1P03956 469 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 PRDX5P30044 214 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 PPP2R5BQ15173 497 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 SF3A1Q15459 793 aaKnown RBP16.18■□□□□ 0.18
HOXC4-202ENST00000430889 SLC51AQ86UW1 340 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 ENAHQ8N8S7 591 aaPredicted RBP16.18■□□□□ 0.18
HOXC4-202ENST00000430889 FANCBQ8NB91 859 aa16.18■□□□□ 0.18
HOXC4-202ENST00000430889 CCDC196A0A1B0GTZ2 297 aa16.17■□□□□ 0.18
HOXC4-202ENST00000430889 ERICH2A1L162 156 aa16.17■□□□□ 0.18
HOXC4-202ENST00000430889 SBK1Q52WX2 424 aa16.17■□□□□ 0.18
HOXC4-202ENST00000430889 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.17■□□□□ 0.18
HOXC4-202ENST00000430889 SEPT12Q8IYM1 358 aa16.17■□□□□ 0.18
HOXC4-202ENST00000430889 DCP1AQ9NPI6 582 aaPredicted RBP16.17■□□□□ 0.18
HOXC4-202ENST00000430889 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.17■□□□□ 0.18
HOXC4-202ENST00000430889 TOMM22Q9NS69 142 aa16.17■□□□□ 0.18
HOXC4-202ENST00000430889 LEMD3Q9Y2U8 911 aa16.17■□□□□ 0.18
HOXC4-202ENST00000430889 NAV1Q8NEY1 1877 aa16.17■□□□□ 0.18
HOXC4-202ENST00000430889 DDX60LQ5H9U9 1706 aaKnown RBP16.16■□□□□ 0.18
HOXC4-202ENST00000430889 DEXIO95424 95 aa16.16■□□□□ 0.18
HOXC4-202ENST00000430889 CRY2Q49AN0 593 aa16.16■□□□□ 0.18
HOXC4-202ENST00000430889 SARM1Q6SZW1 724 aa16.16■□□□□ 0.18
HOXC4-202ENST00000430889 SHISA4Q96DD7 197 aa16.16■□□□□ 0.18
HOXC4-202ENST00000430889 ZSCAN10Q96SZ4 725 aaPredicted RBP16.16■□□□□ 0.18
HOXC4-202ENST00000430889 UBAC1Q9BSL1 405 aa16.16■□□□□ 0.18
HOXC4-202ENST00000430889 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
HOXC4-202ENST00000430889 PFKFB1P16118 471 aa16.15■□□□□ 0.18
HOXC4-202ENST00000430889 ZNF75DP51815 510 aa16.15■□□□□ 0.18
HOXC4-202ENST00000430889 TRIM29Q14134 588 aa16.15■□□□□ 0.18
HOXC4-202ENST00000430889 PRR5LQ6MZQ0 368 aa16.15■□□□□ 0.18
HOXC4-202ENST00000430889 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.15■□□□□ 0.18
HOXC4-202ENST00000430889 NOSTRINQ8IVI9 506 aa16.15■□□□□ 0.18
HOXC4-202ENST00000430889 TIGD1Q96MW7 591 aa16.15■□□□□ 0.18
HOXC4-202ENST00000430889 RNF26Q9BY78 433 aaPredicted RBP16.15■□□□□ 0.18
HOXC4-202ENST00000430889 FOXP1Q9H334 677 aaPredicted RBP16.15■□□□□ 0.18
HOXC4-202ENST00000430889 KCNF1Q9H3M0 494 aa16.15■□□□□ 0.18
HOXC4-202ENST00000430889 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
HOXC4-202ENST00000430889 TRPC5Q9UL62 973 aaPredicted RBP16.15■□□□□ 0.18
HOXC4-202ENST00000430889 USP17L12C9JPN9 530 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 USP17L21D6R901 530 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 ZNF202O95125 648 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 TPM3P06753 285 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 TOB1P50616 345 aaPredicted RBP16.14■□□□□ 0.18
HOXC4-202ENST00000430889 EVX2Q03828 476 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 SHC4Q6S5L8 630 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 DHX40Q8IX18 779 aaKnown RBP16.14■□□□□ 0.18
HOXC4-202ENST00000430889 TRIM22Q8IYM9 498 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 STK11IPQ8N1F8 1099 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 CNBD1Q8NA66 436 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 PIBF1Q8WXW3 757 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 ZNF830Q96NB3 372 aaPredicted RBP16.14■□□□□ 0.18
HOXC4-202ENST00000430889 CRNKL1Q9BZJ0 848 aaKnown RBP16.14■□□□□ 0.18
HOXC4-202ENST00000430889 TTC12Q9H892 705 aaPredicted RBP16.14■□□□□ 0.18
HOXC4-202ENST00000430889 ANO10Q9NW15 660 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 KIAA1468Q9P260 1216 aa16.14■□□□□ 0.18
HOXC4-202ENST00000430889 MORC2Q9Y6X9 1032 aaPredicted RBP16.14■□□□□ 0.18
HOXC4-202ENST00000430889 GYS1P13807 737 aa16.14■□□□□ 0.17
HOXC4-202ENST00000430889 CDC25BP30305 580 aa16.14■□□□□ 0.17
HOXC4-202ENST00000430889 KIAA2012Q0VF49 1180 aa16.14■□□□□ 0.17
HOXC4-202ENST00000430889 TROAPQ12815 778 aa16.14■□□□□ 0.17
HOXC4-202ENST00000430889 CHAF1AQ13111 956 aaPredicted RBP16.14■□□□□ 0.17
HOXC4-202ENST00000430889 PKN1Q16512 942 aa16.14■□□□□ 0.17
HOXC4-202ENST00000430889 AATFQ9NY61 560 aaKnown RBP eCLIP16.14■□□□□ 0.17
HOXC4-202ENST00000430889 XDHP47989 1333 aa16.14■□□□□ 0.17
HOXC4-202ENST00000430889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.13■□□□□ 0.17
HOXC4-202ENST00000430889 BTBD18B2RXH4 712 aa16.13■□□□□ 0.17
HOXC4-202ENST00000430889 MARCKSP29966 332 aaPredicted RBP16.13■□□□□ 0.17
HOXC4-202ENST00000430889 TERF1P54274 439 aa16.13■□□□□ 0.17
HOXC4-202ENST00000430889 RESP18Q5W5W9 173 aa16.13■□□□□ 0.17
HOXC4-202ENST00000430889 SPTY2D1Q68D10 685 aaPredicted RBP16.13■□□□□ 0.17
HOXC4-202ENST00000430889 DIS3L2Q8IYB7 885 aaKnown RBP16.13■□□□□ 0.17
HOXC4-202ENST00000430889 MPNDQ8N594 471 aa16.13■□□□□ 0.17
HOXC4-202ENST00000430889 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
HOXC4-202ENST00000430889 BPIFA3Q9BQP9 254 aa16.13■□□□□ 0.17
HOXC4-202ENST00000430889 SPTLC3Q9NUV7 552 aa16.13■□□□□ 0.17
HOXC4-202ENST00000430889 ARPP21Q9UBL0 812 aaPredicted RBP16.13■□□□□ 0.17
HOXC4-202ENST00000430889 ANKRD31Q8N7Z5 1873 aa16.13■□□□□ 0.17
HOXC4-202ENST00000430889 ROBO3Q96MS0 1386 aa16.13■□□□□ 0.17
HOXC4-202ENST00000430889 PRPF3O43395 683 aaKnown RBP16.12■□□□□ 0.17
HOXC4-202ENST00000430889 CUTAO60888 179 aa16.12■□□□□ 0.17
HOXC4-202ENST00000430889 DDAH1O94760 285 aa16.12■□□□□ 0.17
HOXC4-202ENST00000430889 PLCB2Q00722 1185 aa16.12■□□□□ 0.17
HOXC4-202ENST00000430889 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
HOXC4-202ENST00000430889 KCNJ14Q9UNX9 436 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms