RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
HDAC4-202ENST00000430200 BCRP11274 1271 aa14.47□□□□□ -0.09
HDAC4-202ENST00000430200 DYNLL1P63167 89 aaKnown RBP14.47□□□□□ -0.09
HDAC4-202ENST00000430200 SLF2Q8IX21 1173 aa14.47□□□□□ -0.09
HDAC4-202ENST00000430200 SH3TC2Q8TF17 1288 aa14.47□□□□□ -0.09
HDAC4-202ENST00000430200 ZNF333Q96JL9 665 aa14.47□□□□□ -0.09
HDAC4-202ENST00000430200 ZNF512BQ96KM6 892 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-202ENST00000430200 IL1RAPL2Q9NP60 686 aa14.47□□□□□ -0.09
HDAC4-202ENST00000430200 LRP2BPQ9P2M1 347 aa14.47□□□□□ -0.09
HDAC4-202ENST00000430200 COG6Q9Y2V7 657 aa14.47□□□□□ -0.09
HDAC4-202ENST00000430200 ZHX2Q9Y6X8 837 aa14.47□□□□□ -0.09
HDAC4-202ENST00000430200 RANBP2P49792 3224 aaKnown RBP14.47□□□□□ -0.09
HDAC4-202ENST00000430200 CEP290O15078 2479 aa14.47□□□□□ -0.09
HDAC4-202ENST00000430200 A0A0G2JMZ2 1700 aa14.46□□□□□ -0.09
HDAC4-202ENST00000430200 TRIM75PA6NK02 468 aa14.46□□□□□ -0.09
HDAC4-202ENST00000430200 SLC4A8Q2Y0W8 1093 aa14.46□□□□□ -0.09
HDAC4-202ENST00000430200 TREML2Q5T2D2 321 aa14.46□□□□□ -0.09
HDAC4-202ENST00000430200 NAA16Q6N069 864 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-202ENST00000430200 MAPKAPK5Q8IW41 473 aa14.46□□□□□ -0.09
HDAC4-202ENST00000430200 RLFQ13129 1914 aa14.46□□□□□ -0.09
HDAC4-202ENST00000430200 CXCL11O14625 94 aa14.45□□□□□ -0.1
HDAC4-202ENST00000430200 GSTO1P78417 241 aa14.45□□□□□ -0.1
HDAC4-202ENST00000430200 EVX2Q03828 476 aa14.45□□□□□ -0.1
HDAC4-202ENST00000430200 TBC1D12O60347 775 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 CTNND1O60716 968 aaKnown RBP14.44□□□□□ -0.1
HDAC4-202ENST00000430200 MYCP01106 439 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-202ENST00000430200 LDHCP07864 332 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 EN2P19622 333 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-202ENST00000430200 OSBPP22059 807 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 PPP4CP60510 307 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 CCDC158Q5M9N0 1113 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 GADL1Q6ZQY3 521 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 AACSQ86V21 672 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 MIGA1Q8NAN2 632 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 TGFBRAP1Q8WUH2 860 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.44□□□□□ -0.11e-6■■■■■ 29.3
HDAC4-202ENST00000430200 PICK1Q9NRD5 415 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 ZBTB40Q9NUA8 1239 aa14.44□□□□□ -0.1
HDAC4-202ENST00000430200 SAP30BPQ9UHR5 308 aaKnown RBP14.44□□□□□ -0.1
HDAC4-202ENST00000430200 GREB1LQ9C091 1923 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-202ENST00000430200 APBB1O00213 710 aa14.43□□□□□ -0.1
HDAC4-202ENST00000430200 RHPN1Q8TCX5 695 aa14.43□□□□□ -0.1
HDAC4-202ENST00000430200 SHISA4Q96DD7 197 aa14.43□□□□□ -0.1
HDAC4-202ENST00000430200 EDC3Q96F86 508 aaKnown RBP14.43□□□□□ -0.1
HDAC4-202ENST00000430200 PARK7Q99497 189 aaKnown RBP14.43□□□□□ -0.1
HDAC4-202ENST00000430200 PALD1Q9ULE6 856 aa14.43□□□□□ -0.1
HDAC4-202ENST00000430200 IDH1O75874 414 aaKnown RBP14.42□□□□□ -0.1
HDAC4-202ENST00000430200 CHGBP05060 677 aa14.42□□□□□ -0.1
HDAC4-202ENST00000430200 CAP2P40123 477 aa14.42□□□□□ -0.1
HDAC4-202ENST00000430200 PSMC4P43686 418 aa14.42□□□□□ -0.1
HDAC4-202ENST00000430200 PRKCZQ05513 592 aa14.42□□□□□ -0.1
HDAC4-202ENST00000430200 SLFNL1Q499Z3 407 aa14.42□□□□□ -0.1
HDAC4-202ENST00000430200 SLC9C1Q4G0N8 1177 aa14.42□□□□□ -0.1
HDAC4-202ENST00000430200 MAGEB6Q8N7X4 407 aa14.42□□□□□ -0.1
HDAC4-202ENST00000430200 RCAN3Q9UKA8 241 aa14.42□□□□□ -0.1
HDAC4-202ENST00000430200 GABRQQ9UN88 632 aa14.42□□□□□ -0.1
HDAC4-202ENST00000430200 COL11A1P12107 1806 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-202ENST00000430200 PEX10O60683 326 aa14.41□□□□□ -0.1
HDAC4-202ENST00000430200 GDF11O95390 407 aa14.41□□□□□ -0.1
HDAC4-202ENST00000430200 MAP4K4O95819 1239 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-202ENST00000430200 CYP7A1P22680 504 aa14.41□□□□□ -0.1
HDAC4-202ENST00000430200 HMGCS2P54868 508 aa14.41□□□□□ -0.1
HDAC4-202ENST00000430200 MTFR1Q15390 333 aa14.41□□□□□ -0.1
HDAC4-202ENST00000430200 METTL16Q86W50 562 aaKnown RBP14.41□□□□□ -0.1
HDAC4-202ENST00000430200 RIOK1Q9BRS2 568 aaKnown RBP14.41□□□□□ -0.1
HDAC4-202ENST00000430200 SRRDQ9UH36 339 aa14.41□□□□□ -0.1
HDAC4-202ENST00000430200 AGTPBP1Q9UPW5 1226 aa14.41□□□□□ -0.1
HDAC4-202ENST00000430200 MYPNQ86TC9 1320 aa14.41□□□□□ -0.1
HDAC4-202ENST00000430200 DNAH12Q6ZR08 3092 aa14.4□□□□□ -0.1
HDAC4-202ENST00000430200 SPP2Q13103 211 aa14.4□□□□□ -0.1
HDAC4-202ENST00000430200 SZT2Q5T011 3432 aa14.4□□□□□ -0.1
HDAC4-202ENST00000430200 MTMR2Q13614 643 aa14.39□□□□□ -0.11
HDAC4-202ENST00000430200 PRPF38BQ5VTL8 546 aaKnown RBP14.39□□□□□ -0.11
HDAC4-202ENST00000430200 POTEEQ6S8J3 1075 aa14.39□□□□□ -0.11
HDAC4-202ENST00000430200 ZNF280CQ8ND82 737 aa14.39□□□□□ -0.11
HDAC4-202ENST00000430200 HERC5Q9UII4 1024 aaKnown RBP14.39□□□□□ -0.11
HDAC4-202ENST00000430200 ZBTB21Q9ULJ3 1066 aa14.39□□□□□ -0.11
HDAC4-202ENST00000430200 DDX19BQ9UMR2 479 aa14.39□□□□□ -0.11
HDAC4-202ENST00000430200 SLC45A1Q9Y2W3 748 aa14.39□□□□□ -0.11
HDAC4-202ENST00000430200 TCRBV5S4A2TA0A5A2 114 aa14.38□□□□□ -0.11
HDAC4-202ENST00000430200 SMIM22K7EJ46 135 aa14.38□□□□□ -0.11
HDAC4-202ENST00000430200 SLC34A2O95436 690 aa14.38□□□□□ -0.11
HDAC4-202ENST00000430200 BAG3O95817 575 aa14.38□□□□□ -0.11
HDAC4-202ENST00000430200 PDE6AP16499 860 aa14.38□□□□□ -0.11
HDAC4-202ENST00000430200 FASTKD5Q7L8L6 764 aaKnown RBP14.38□□□□□ -0.11
HDAC4-202ENST00000430200 ERC1Q8IUD2 1116 aa14.38□□□□□ -0.11
HDAC4-202ENST00000430200 NOL10Q9BSC4 688 aaKnown RBP14.38□□□□□ -0.11
HDAC4-202ENST00000430200 BCL11AQ9H165 835 aa14.38□□□□□ -0.11
HDAC4-202ENST00000430200 PI4KBQ9UBF8 816 aa14.38□□□□□ -0.11
HDAC4-202ENST00000430200 FMNL1O95466 1100 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-202ENST00000430200 PLCG2P16885 1265 aa14.37□□□□□ -0.11
HDAC4-202ENST00000430200 KIF22Q14807 665 aa14.37□□□□□ -0.11
HDAC4-202ENST00000430200 SH3D19Q5HYK7 790 aa14.37□□□□□ -0.11
HDAC4-202ENST00000430200 ANKRD13CQ8N6S4 541 aa14.37□□□□□ -0.11
HDAC4-202ENST00000430200 PROCA1Q8NCQ7 364 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-202ENST00000430200 KIF1BPQ96EK5 621 aa14.37□□□□□ -0.11
HDAC4-202ENST00000430200 DHX36Q9H2U1 1008 aaKnown RBP14.37□□□□□ -0.11
HDAC4-202ENST00000430200 LAMA3Q16787 3333 aa14.36□□□□□ -0.11
HDAC4-202ENST00000430200 USP17L5A8MUK1 530 aa14.36□□□□□ -0.11
HDAC4-202ENST00000430200 GOLIM4O00461 696 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms