RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 NYXQ9GZU5 481 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 NRBP1Q9UHY1 535 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 TNKSO95271 1327 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 CDKL5O76039 1030 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 ZNF654Q8IZM8 581 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 GPR101Q96P66 508 aaPredicted RBP16.19■□□□□ 0.18
RBM39-212ENST00000429968 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.19■□□□□ 0.18
RBM39-212ENST00000429968 AATFQ9NY61 560 aaKnown RBP eCLIP16.19■□□□□ 0.18
RBM39-212ENST00000429968 ANAPC4Q9UJX5 808 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 PYCARDQ9ULZ3 195 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 IFNAR1P17181 557 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 U2AF2P26368 475 aaKnown RBP eCLIP16.18■□□□□ 0.182e-8■■□□□ 13.9
RBM39-212ENST00000429968 RTN1Q16799 776 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 CTR9Q6PD62 1173 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 PLA2G4DQ86XP0 818 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 DHX40Q8IX18 779 aaKnown RBP16.18■□□□□ 0.18
RBM39-212ENST00000429968 KCNG4Q8TDN1 519 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 NUP133Q8WUM0 1156 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 STK36Q9NRP7 1315 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 CDK5RAP2Q96SN8 1893 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 BTBD18B2RXH4 712 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 RGL2O15211 777 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 CYP2D6P10635 497 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 PFKFB1P16118 471 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 SSRP1Q08945 709 aaKnown RBP16.18■□□□□ 0.18
RBM39-212ENST00000429968 NFIXQ14938 502 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 SLC39A14Q15043 492 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 GRIK5Q16478 980 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 SLC4A8Q2Y0W8 1093 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 TPTE2Q6XPS3 522 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 SYNE3Q6ZMZ3 975 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 FAM196AQ6ZSG2 479 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 ENAHQ8N8S7 591 aaPredicted RBP16.18■□□□□ 0.18
RBM39-212ENST00000429968 CLIC6Q96NY7 704 aa16.18■□□□□ 0.18
RBM39-212ENST00000429968 PTGS1P23219 599 aa16.17■□□□□ 0.18
RBM39-212ENST00000429968 HIBADHP31937 336 aaKnown RBP16.17■□□□□ 0.18
RBM39-212ENST00000429968 TOB1P50616 345 aaPredicted RBP16.17■□□□□ 0.18
RBM39-212ENST00000429968 ZNF75DP51815 510 aa16.17■□□□□ 0.18
RBM39-212ENST00000429968 STX1AQ16623 288 aa16.17■□□□□ 0.18
RBM39-212ENST00000429968 SHC4Q6S5L8 630 aa16.17■□□□□ 0.18
RBM39-212ENST00000429968 R3HCC1Q9Y3T6 440 aaKnown RBP16.17■□□□□ 0.18
RBM39-212ENST00000429968 hCG_1642624A0A1W2PR95 340 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 USP17L12C9JPN9 530 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 USP17L21D6R901 530 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 CTAGE5O15320 804 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 NMT2O60551 498 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 KIAA2012Q0VF49 1180 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 CPLX2Q6PUV4 134 aaKnown RBP16.16■□□□□ 0.18
RBM39-212ENST00000429968 CRACR2BQ8N4Y2 399 aaPredicted RBP16.16■□□□□ 0.18
RBM39-212ENST00000429968 OXER1Q8TDS5 423 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 GJD4Q96KN9 370 aaPredicted RBP16.16■□□□□ 0.18
RBM39-212ENST00000429968 ZNF202O95125 648 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 GRIN1Q05586 938 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 NR5A1Q13285 461 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.16■□□□□ 0.18
RBM39-212ENST00000429968 FANCBQ8NB91 859 aa16.16■□□□□ 0.18
RBM39-212ENST00000429968 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.16■□□□□ 0.18
RBM39-212ENST00000429968 MMP1P03956 469 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 DPCR1Q3MIW9 517 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 PIBF1Q8WXW3 757 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 BRIP1Q9BX63 1249 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 RNF41Q9H4P4 317 aaPredicted RBP16.15■□□□□ 0.18
RBM39-212ENST00000429968 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 FAM205CA6NFA0 338 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 PLEKHA8P1O95397 391 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 RFC4P35249 363 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 LRMPQ12912 555 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 CCDC144BQ3MJ40 725 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 SDF4Q9BRK5 362 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 UBAC1Q9BSL1 405 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 TRIM5Q9C035 493 aa16.15■□□□□ 0.18
RBM39-212ENST00000429968 DCP1AQ9NPI6 582 aaPredicted RBP16.15■□□□□ 0.18
RBM39-212ENST00000429968 AFF2P51816 1311 aa16.14■□□□□ 0.17
RBM39-212ENST00000429968 BIN1O00499 593 aa16.14■□□□□ 0.17
RBM39-212ENST00000429968 CMA1P23946 247 aa16.14■□□□□ 0.17
RBM39-212ENST00000429968 FUT2Q10981 343 aa16.14■□□□□ 0.17
RBM39-212ENST00000429968 SART3Q15020 963 aaKnown RBP16.14■□□□□ 0.17
RBM39-212ENST00000429968 SPECC1Q5M775 1068 aa16.14■□□□□ 0.17
RBM39-212ENST00000429968 DIS3L2Q8IYB7 885 aaKnown RBP16.14■□□□□ 0.17
RBM39-212ENST00000429968 ESR2Q92731 530 aa16.14■□□□□ 0.17
RBM39-212ENST00000429968 ZSCAN10Q96SZ4 725 aaPredicted RBP16.14■□□□□ 0.17
RBM39-212ENST00000429968 HPSEQ9Y251 543 aa16.14■□□□□ 0.17
RBM39-212ENST00000429968 SPATA31A6Q5VVP1 1343 aa16.14■□□□□ 0.17
RBM39-212ENST00000429968 ERICH2A1L162 156 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 FGRP09769 529 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 GNL2Q13823 731 aaKnown RBP16.13■□□□□ 0.17
RBM39-212ENST00000429968 FAM47AQ5JRC9 791 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 TRAPPC3LQ5T215 181 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 CCDC186Q7Z3E2 898 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 AOPEPQ8N6M6 819 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 RGS22Q8NE09 1264 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 ANKRD2Q9GZV1 360 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 KIAA1468Q9P260 1216 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.13■□□□□ 0.17
RBM39-212ENST00000429968 GOLGB1Q14789 3259 aaKnown RBP16.13■□□□□ 0.17
RBM39-212ENST00000429968 SEMA3EO15041 775 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 NOLC1Q14978 699 aaKnown RBP eCLIP16.13■□□□□ 0.17
RBM39-212ENST00000429968 PKN1Q16512 942 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 EARS2Q5JPH6 523 aaKnown RBP16.13■□□□□ 0.17
RBM39-212ENST00000429968 ISM2Q6H9L7 571 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms