RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 MFSD14BQ5SR56 506 aa12.09□□□□□ -0.47
HDAC9-210ENST00000428307 TGFBRAP1Q8WUH2 860 aa12.09□□□□□ -0.47
HDAC9-210ENST00000428307 MTA3Q9BTC8 594 aa12.09□□□□□ -0.47
HDAC9-210ENST00000428307 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
HDAC9-210ENST00000428307 CCDC196A0A1B0GTZ2 297 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.47
HDAC9-210ENST00000428307 BAG3O95817 575 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 FGRP09769 529 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 SRGNP10124 158 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 STK38Q15208 465 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 BRAPQ7Z569 592 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 TRIM22Q8IYM9 498 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 CRACR2BQ8N4Y2 399 aaPredicted RBP12.08□□□□□ -0.47
HDAC9-210ENST00000428307 LINC00301Q8NCQ3 95 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 FUCA2Q9BTY2 467 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 GOLPH3LQ9H4A5 285 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 DDX19AQ9NUU7 478 aaKnown RBP12.08□□□□□ -0.47
HDAC9-210ENST00000428307 PODXL2Q9NZ53 605 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 ARPP21Q9UBL0 812 aaPredicted RBP12.08□□□□□ -0.47
HDAC9-210ENST00000428307 PCDHA7Q9UN72 937 aa12.08□□□□□ -0.47
HDAC9-210ENST00000428307 hCG_1642624A0A1W2PR95 340 aa12.08□□□□□ -0.48
HDAC9-210ENST00000428307 SLC3A2P08195 630 aaKnown RBP12.08□□□□□ -0.48
HDAC9-210ENST00000428307 IL1R1P14778 569 aa12.08□□□□□ -0.48
HDAC9-210ENST00000428307 GSTO1P78417 241 aa12.08□□□□□ -0.48
HDAC9-210ENST00000428307 SP8Q8IXZ3 490 aa12.08□□□□□ -0.48
HDAC9-210ENST00000428307 DYNLL2Q96FJ2 89 aa12.08□□□□□ -0.48
HDAC9-210ENST00000428307 NOL10Q9BSC4 688 aaKnown RBP12.08□□□□□ -0.48
HDAC9-210ENST00000428307 KCNJ14Q9UNX9 436 aa12.08□□□□□ -0.48
HDAC9-210ENST00000428307 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDAC9-210ENST00000428307 TSPY2A6NKD2 308 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 LDHCP07864 332 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 CCDC192P0DO97 292 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 HMGB2P26583 209 aaKnown RBP12.07□□□□□ -0.48
HDAC9-210ENST00000428307 GTF2IP78347 998 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 PDE4BQ07343 736 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 CATIPQ7Z7H3 387 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 NBPF11Q86T75 865 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 MAPKAPK5Q8IW41 473 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 CLSTN2Q9H4D0 955 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 MKRN1Q9UHC7 482 aaKnown RBP12.07□□□□□ -0.48
HDAC9-210ENST00000428307 PARP3Q9Y6F1 533 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 PCP11498 1178 aaKnown RBP12.07□□□□□ -0.48
HDAC9-210ENST00000428307 BTDP43251 543 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 RRAGDQ9NQL2 400 aaPredicted RBP12.07□□□□□ -0.48
HDAC9-210ENST00000428307 SAP30BPQ9UHR5 308 aaKnown RBP12.07□□□□□ -0.48
HDAC9-210ENST00000428307 ATP6V0A2Q9Y487 856 aa12.07□□□□□ -0.48
HDAC9-210ENST00000428307 BTBD18B2RXH4 712 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 SPTLC2O15270 562 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 ORC4O43929 436 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 MARCKSP29966 332 aaPredicted RBP12.06□□□□□ -0.48
HDAC9-210ENST00000428307 PLCB2Q00722 1185 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 C12orf60Q5U649 245 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 ANO1Q5XXA6 986 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 TMED8Q6PL24 325 aaPredicted RBP12.06□□□□□ -0.48
HDAC9-210ENST00000428307 CCDC73Q6ZRK6 1079 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 FSIP1Q8NA03 581 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 ZNF622Q969S3 477 aaKnown RBP eCLIP12.06□□□□□ -0.48
HDAC9-210ENST00000428307 RTFDC1Q9BY42 306 aaPredicted RBP12.06□□□□□ -0.48
HDAC9-210ENST00000428307 ZC3H12CQ9C0D7 883 aaKnown RBP12.06□□□□□ -0.48
HDAC9-210ENST00000428307 POLR3EQ9NVU0 708 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 A0A1B0GVL5 298 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 F8W031 263 aaPredicted RBP12.06□□□□□ -0.48
HDAC9-210ENST00000428307 ZBTB22O15209 634 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 PLEKHA8P1O95397 391 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 NPR1P16066 1061 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 PLCD1P51178 756 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 PPP4CP60510 307 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 TYRO3Q06418 890 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 TROAPQ12815 778 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 SNW1Q13573 536 aaKnown RBP12.06□□□□□ -0.48
HDAC9-210ENST00000428307 FAM43AQ8N2R8 423 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 MPNDQ8N594 471 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 FLAD1Q8NFF5 587 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 WASF1Q92558 559 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 PDLIM2Q96JY6 352 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.06□□□□□ -0.48
HDAC9-210ENST00000428307 USP25Q9UHP3 1055 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 BAZ2AQ9UIF9 1905 aaKnown RBP12.06□□□□□ -0.48
HDAC9-210ENST00000428307 MROH7-TTC4A0A0A0MT08 1334 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 STK36Q9NRP7 1315 aa12.06□□□□□ -0.48
HDAC9-210ENST00000428307 DEXIO95424 95 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 PDE6BP35913 854 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 TFAP4Q01664 338 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 ADALQ6DHV7 355 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 SLC44A5Q8NCS7 719 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 KCNG4Q8TDN1 519 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 MKNK2Q9HBH9 465 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 V9GY48 417 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-210ENST00000428307 MYH13Q9UKX3 1938 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 YEATS4O95619 227 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.48
HDAC9-210ENST00000428307 ALDH1B1P30837 517 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 RCAN1P53805 252 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 AKAP17AQ02040 695 aaKnown RBP12.05□□□□□ -0.48
HDAC9-210ENST00000428307 DPP8Q6V1X1 898 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-210ENST00000428307 DIS3L2Q8IYB7 885 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms