RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 GIPC1O14908 333 aa9.18□□□□□ -0.94
C9orf3-205ENST00000427193 ZNF574Q6ZN55 896 aaPredicted RBP9.18□□□□□ -0.94
C9orf3-205ENST00000427193 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.18□□□□□ -0.94
C9orf3-205ENST00000427193 PLD6Q8N2A8 252 aaKnown RBP9.18□□□□□ -0.94
C9orf3-205ENST00000427193 FAM181AQ8N9Y4 354 aa9.18□□□□□ -0.94
C9orf3-205ENST00000427193 ACSBG1Q96GR2 724 aa9.18□□□□□ -0.94
C9orf3-205ENST00000427193 SSU72Q9NP77 194 aaKnown RBP9.18□□□□□ -0.94
C9orf3-205ENST00000427193 HECW2Q9P2P5 1572 aa9.17□□□□□ -0.94
C9orf3-205ENST00000427193 LEFTY1O75610 366 aa9.17□□□□□ -0.94
C9orf3-205ENST00000427193 MAPK8P45983 427 aa9.17□□□□□ -0.94
C9orf3-205ENST00000427193 PLCL1Q15111 1095 aa9.17□□□□□ -0.94
C9orf3-205ENST00000427193 ALG1LQ6GMV1 187 aa9.17□□□□□ -0.94
C9orf3-205ENST00000427193 SPRED2Q7Z698 418 aa9.17□□□□□ -0.94
C9orf3-205ENST00000427193 ANKRD24Q8TF21 1146 aa9.17□□□□□ -0.94
C9orf3-205ENST00000427193 VAV3Q9UKW4 847 aa9.17□□□□□ -0.94
C9orf3-205ENST00000427193 ENC1O14682 589 aa9.16□□□□□ -0.94
C9orf3-205ENST00000427193 TRIM37O94972 964 aa9.16□□□□□ -0.94
C9orf3-205ENST00000427193 IFI16Q16666 785 aaKnown RBP9.16□□□□□ -0.94
C9orf3-205ENST00000427193 TPTE2Q6XPS3 522 aa9.16□□□□□ -0.94
C9orf3-205ENST00000427193 ARHGAP27Q6ZUM4 889 aa9.16□□□□□ -0.94
C9orf3-205ENST00000427193 ASB16Q96NS5 453 aa9.16□□□□□ -0.94
C9orf3-205ENST00000427193 BMP6P22004 513 aa9.15□□□□□ -0.94
C9orf3-205ENST00000427193 PRKCQQ04759 706 aa9.15□□□□□ -0.94
C9orf3-205ENST00000427193 BNIP3Q12983 259 aa9.15□□□□□ -0.94
C9orf3-205ENST00000427193 ZNF792Q3KQV3 632 aa9.15□□□□□ -0.94
C9orf3-205ENST00000427193 SCARA3Q6AZY7 606 aa9.15□□□□□ -0.94
C9orf3-205ENST00000427193 OSBPL7Q9BZF2 842 aa9.15□□□□□ -0.94
C9orf3-205ENST00000427193 ADGRL1O94910 1474 aa9.15□□□□□ -0.95
C9orf3-205ENST00000427193 FGD5Q6ZNL6 1462 aa9.15□□□□□ -0.95
C9orf3-205ENST00000427193 KDM6BO15054 1643 aa9.14□□□□□ -0.95
C9orf3-205ENST00000427193 CEACAM5P06731 702 aa9.14□□□□□ -0.95
C9orf3-205ENST00000427193 OXCT1P55809 520 aa9.14□□□□□ -0.95
C9orf3-205ENST00000427193 ATP2B2Q01814 1243 aa9.14□□□□□ -0.95
C9orf3-205ENST00000427193 TOP6BLQ8N6T0 577 aa9.14□□□□□ -0.95
C9orf3-205ENST00000427193 U3KQE9 123 aa9.14□□□□□ -0.95
C9orf3-205ENST00000427193 CEP170Q5SW79 1584 aa9.14□□□□□ -0.95
C9orf3-205ENST00000427193 TMEM265A0A087WTH1 108 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 BIN1O00499 593 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 CD8BP10966 210 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 FUT4P22083 530 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 KCNA1Q09470 495 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 LRRC14Q15048 493 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 OGFOD2Q6N063 350 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 LLGL2Q6P1M3 1020 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 GRIN3AQ8TCU5 1115 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 HRASLS5Q96KN8 279 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 SPG7Q9UQ90 795 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 IVNS1ABPQ9Y6Y0 642 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 LMTK3Q96Q04 1460 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 NUP160Q12769 1436 aa9.13□□□□□ -0.95
C9orf3-205ENST00000427193 PAGE1O75459 146 aa9.12□□□□□ -0.95
C9orf3-205ENST00000427193 RING1Q06587 406 aa9.12□□□□□ -0.95
C9orf3-205ENST00000427193 PPM1JQ5JR12 505 aa9.12□□□□□ -0.95
C9orf3-205ENST00000427193 MPRIPQ6WCQ1 1025 aa9.12□□□□□ -0.95
C9orf3-205ENST00000427193 KRTAP9-9Q9BYP9 154 aa9.12□□□□□ -0.95
C9orf3-205ENST00000427193 KRTAP9-4Q9BYQ2 154 aa9.12□□□□□ -0.95
C9orf3-205ENST00000427193 TIMELESSQ9UNS1 1208 aa9.12□□□□□ -0.95
C9orf3-205ENST00000427193 MAPKBP1O60336 1514 aa9.11□□□□□ -0.95
C9orf3-205ENST00000427193 FANCGO15287 622 aa9.11□□□□□ -0.95
C9orf3-205ENST00000427193 PAPLNO95428 1278 aa9.11□□□□□ -0.95
C9orf3-205ENST00000427193 NTF4P34130 210 aa9.11□□□□□ -0.95
C9orf3-205ENST00000427193 AOC3Q16853 763 aa9.11□□□□□ -0.95
C9orf3-205ENST00000427193 SETDB2Q96T68 719 aa9.11□□□□□ -0.95
C9orf3-205ENST00000427193 PICK1Q9NRD5 415 aa9.11□□□□□ -0.95
C9orf3-205ENST00000427193 GTF2IRD1Q9UHL9 959 aa9.11□□□□□ -0.95
C9orf3-205ENST00000427193 CYP8B1Q9UNU6 501 aa9.11□□□□□ -0.95
C9orf3-205ENST00000427193 WRNQ14191 1432 aaPredicted RBP eCLIP9.11□□□□□ -0.95
C9orf3-205ENST00000427193 DIP2BQ9P265 1576 aa9.11□□□□□ -0.95
C9orf3-205ENST00000427193 CUX1P39880 1505 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 GRIN2AQ12879 1464 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 DCDC2CA8MYV0 355 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 FBXO24O75426 580 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 POU5F2Q8N7G0 328 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 KCT2Q8NC54 265 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 TNKS2Q9H2K2 1166 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 C12orf49Q9H741 205 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 PRDM10Q9NQV6 1147 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 FAM8A1Q9UBU6 413 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 PLAGL2Q9UPG8 496 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 SNX11Q9Y5W9 270 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 CSADQ9Y600 493 aa9.1□□□□□ -0.95
C9orf3-205ENST00000427193 SHROOM2Q13796 1616 aa9.09□□□□□ -0.95
C9orf3-205ENST00000427193 IGF2BP3O00425 579 aaKnown RBP eCLIP9.09□□□□□ -0.95
C9orf3-205ENST00000427193 ZBTB37Q5TC79 503 aa9.09□□□□□ -0.95
C9orf3-205ENST00000427193 ATG4DQ86TL0 474 aaPredicted RBP9.09□□□□□ -0.95
C9orf3-205ENST00000427193 HEXIM2Q96MH2 286 aaKnown RBP9.09□□□□□ -0.95
C9orf3-205ENST00000427193 WWC3Q9ULE0 1092 aa9.09□□□□□ -0.95
C9orf3-205ENST00000427193 PCDHA4Q9UN74 947 aa9.09□□□□□ -0.95
C9orf3-205ENST00000427193 PBRM1Q86U86 1689 aa9.09□□□□□ -0.95
C9orf3-205ENST00000427193 ITIH2P19823 946 aa9.08□□□□□ -0.96
C9orf3-205ENST00000427193 CDC37L1Q7L3B6 337 aa9.08□□□□□ -0.96
C9orf3-205ENST00000427193 FAM214BQ7L5A3 538 aa9.08□□□□□ -0.96
C9orf3-205ENST00000427193 C12orf40Q86WS4 652 aa9.08□□□□□ -0.96
C9orf3-205ENST00000427193 PI4K2BQ8TCG2 481 aa9.08□□□□□ -0.96
C9orf3-205ENST00000427193 FRMD6Q96NE9 622 aa9.08□□□□□ -0.96
C9orf3-205ENST00000427193 RC3H2Q9HBD1 1191 aaKnown RBP9.08□□□□□ -0.96
C9orf3-205ENST00000427193 TOP2BQ02880 1626 aa9.07□□□□□ -0.96
C9orf3-205ENST00000427193 RNASE1P07998 156 aaKnown RBP9.07□□□□□ -0.96
C9orf3-205ENST00000427193 CD96P40200 585 aa9.07□□□□□ -0.96
C9orf3-205ENST00000427193 RASIP1Q5U651 963 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms