RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 SHISA4Q96DD7 197 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 OSBPL5Q9H0X9 879 aaPredicted RBP12.37□□□□□ -0.43
GACAT3-201ENST00000426539 GPR108Q9NPR9 543 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 SLC45A1Q9Y2W3 748 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 MYPNQ86TC9 1320 aa12.37□□□□□ -0.43
GACAT3-201ENST00000426539 COL2A1P02458 1487 aaPredicted RBP12.36□□□□□ -0.43
GACAT3-201ENST00000426539 ZBTB7BO15156 539 aaPredicted RBP12.36□□□□□ -0.43
GACAT3-201ENST00000426539 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
GACAT3-201ENST00000426539 HOXD10P28358 340 aa12.36□□□□□ -0.43
GACAT3-201ENST00000426539 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
GACAT3-201ENST00000426539 ADGRA1Q86SQ6 560 aa12.36□□□□□ -0.43
GACAT3-201ENST00000426539 MIER1Q8N108 512 aa12.36□□□□□ -0.43
GACAT3-201ENST00000426539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.36□□□□□ -0.43
GACAT3-201ENST00000426539 LRP2BPQ9P2M1 347 aa12.36□□□□□ -0.43
GACAT3-201ENST00000426539 GABRQQ9UN88 632 aa12.36□□□□□ -0.43
GACAT3-201ENST00000426539 AK9Q5TCS8 1911 aa12.36□□□□□ -0.43
GACAT3-201ENST00000426539 SURF6O75683 361 aaKnown RBP12.35□□□□□ -0.43
GACAT3-201ENST00000426539 CYP2E1P05181 493 aaPredicted RBP12.35□□□□□ -0.43
GACAT3-201ENST00000426539 GRK4P32298 578 aa12.35□□□□□ -0.43
GACAT3-201ENST00000426539 FCGRTP55899 365 aa12.35□□□□□ -0.43
GACAT3-201ENST00000426539 HNRNPUQ00839 825 aaKnown RBP eCLIP12.35□□□□□ -0.43
GACAT3-201ENST00000426539 TTC39AQ5SRH9 613 aa12.35□□□□□ -0.43
GACAT3-201ENST00000426539 TEX11Q8IYF3 940 aa12.35□□□□□ -0.43
GACAT3-201ENST00000426539 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
GACAT3-201ENST00000426539 RAET1EQ8TD07 263 aa12.35□□□□□ -0.43
GACAT3-201ENST00000426539 PIH1D3Q9NQM4 214 aaKnown RBP12.35□□□□□ -0.43
GACAT3-201ENST00000426539 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
GACAT3-201ENST00000426539 AGTPBP1Q9UPW5 1226 aa12.35□□□□□ -0.43
GACAT3-201ENST00000426539 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
GACAT3-201ENST00000426539 PHIPQ8WWQ0 1821 aa12.34□□□□□ -0.43
GACAT3-201ENST00000426539 DOCK1Q14185 1865 aa12.34□□□□□ -0.43
GACAT3-201ENST00000426539 CAP2P40123 477 aa12.34□□□□□ -0.43
GACAT3-201ENST00000426539 ZAP70P43403 619 aa12.34□□□□□ -0.43
GACAT3-201ENST00000426539 PPP4CP60510 307 aa12.34□□□□□ -0.43
GACAT3-201ENST00000426539 JAG1P78504 1218 aa12.34□□□□□ -0.43
GACAT3-201ENST00000426539 SPP2Q13103 211 aa12.34□□□□□ -0.43
GACAT3-201ENST00000426539 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
GACAT3-201ENST00000426539 ZNF512BQ96KM6 892 aaPredicted RBP12.34□□□□□ -0.43
GACAT3-201ENST00000426539 DNAJC18Q9H819 358 aa12.34□□□□□ -0.43
GACAT3-201ENST00000426539 AATFQ9NY61 560 aaKnown RBP eCLIP12.34□□□□□ -0.43
GACAT3-201ENST00000426539 DBNLQ9UJU6 430 aaKnown RBP12.34□□□□□ -0.43
GACAT3-201ENST00000426539 CCL5P13501 91 aa12.33□□□□□ -0.44
GACAT3-201ENST00000426539 OS9Q13438 667 aaPredicted RBP12.33□□□□□ -0.44
GACAT3-201ENST00000426539 SHROOM1Q2M3G4 852 aaPredicted RBP12.33□□□□□ -0.44
GACAT3-201ENST00000426539 CCDC158Q5M9N0 1113 aa12.33□□□□□ -0.44
GACAT3-201ENST00000426539 NAA16Q6N069 864 aaPredicted RBP12.33□□□□□ -0.44
GACAT3-201ENST00000426539 UBE2Q1Q7Z7E8 422 aa12.33□□□□□ -0.44
GACAT3-201ENST00000426539 ITPRIPQ8IWB1 547 aa12.33□□□□□ -0.44
GACAT3-201ENST00000426539 ANKRD13CQ8N6S4 541 aa12.33□□□□□ -0.44
GACAT3-201ENST00000426539 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
GACAT3-201ENST00000426539 GCC1Q96CN9 775 aa12.33□□□□□ -0.44
GACAT3-201ENST00000426539 GJB1P08034 283 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 GJA8P48165 433 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 FLT3LGP49771 235 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
GACAT3-201ENST00000426539 SH3D19Q5HYK7 790 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 CEP85Q6P2H3 762 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 METTL16Q86W50 562 aaKnown RBP12.32□□□□□ -0.44
GACAT3-201ENST00000426539 MAPKAPK5Q8IW41 473 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 FTSJ3Q8IY81 847 aaKnown RBP12.32□□□□□ -0.44
GACAT3-201ENST00000426539 PROCA1Q8NCQ7 364 aaPredicted RBP12.32□□□□□ -0.44
GACAT3-201ENST00000426539 ZNF280CQ8ND82 737 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 SMCR8Q8TEV9 937 aaPredicted RBP12.32□□□□□ -0.44
GACAT3-201ENST00000426539 TGFBRAP1Q8WUH2 860 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 CCDC8Q9H0W5 538 aaPredicted RBP12.32□□□□□ -0.44
GACAT3-201ENST00000426539 UNC93B1Q9H1C4 597 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 PI4KBQ9UBF8 816 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 HERC5Q9UII4 1024 aaKnown RBP12.32□□□□□ -0.44
GACAT3-201ENST00000426539 PTPRFP10586 1907 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 FLT1P17948 1338 aa12.32□□□□□ -0.44
GACAT3-201ENST00000426539 USP17L5A8MUK1 530 aa12.31□□□□□ -0.44
GACAT3-201ENST00000426539 TNPO2O14787 897 aaKnown RBP12.31□□□□□ -0.44
GACAT3-201ENST00000426539 BAG3O95817 575 aa12.31□□□□□ -0.44
GACAT3-201ENST00000426539 ELNP15502 786 aa12.31□□□□□ -0.44
GACAT3-201ENST00000426539 HMGCS2P54868 508 aa12.31□□□□□ -0.44
GACAT3-201ENST00000426539 DYNLL1P63167 89 aaKnown RBP12.31□□□□□ -0.44
GACAT3-201ENST00000426539 SLAIN1Q8ND83 568 aa12.31□□□□□ -0.44
GACAT3-201ENST00000426539 RNF208Q9H0X6 261 aa12.31□□□□□ -0.44
GACAT3-201ENST00000426539 DHX36Q9H2U1 1008 aaKnown RBP12.31□□□□□ -0.44
GACAT3-201ENST00000426539 PALD1Q9ULE6 856 aa12.31□□□□□ -0.44
GACAT3-201ENST00000426539 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
GACAT3-201ENST00000426539 SIPA1L1O43166 1804 aa12.31□□□□□ -0.44
GACAT3-201ENST00000426539 H0YGN5 161 aa12.3□□□□□ -0.44
GACAT3-201ENST00000426539 ADCY3O60266 1144 aa12.3□□□□□ -0.44
GACAT3-201ENST00000426539 PLCG2P16885 1265 aa12.3□□□□□ -0.44
GACAT3-201ENST00000426539 IRF5Q13568 498 aa12.3□□□□□ -0.44
GACAT3-201ENST00000426539 FAM110CQ1W6H9 321 aa12.3□□□□□ -0.44
GACAT3-201ENST00000426539 PANK1Q8TE04 598 aa12.3□□□□□ -0.44
GACAT3-201ENST00000426539 NOL10Q9BSC4 688 aaKnown RBP12.3□□□□□ -0.44
GACAT3-201ENST00000426539 WDR18Q9BV38 432 aa12.3□□□□□ -0.44
GACAT3-201ENST00000426539 TBC1D2Q9BYX2 928 aa12.3□□□□□ -0.44
GACAT3-201ENST00000426539 ASCC2Q9H1I8 757 aaPredicted RBP12.3□□□□□ -0.44
GACAT3-201ENST00000426539 ANTXR1Q9H6X2 564 aa12.3□□□□□ -0.44
GACAT3-201ENST00000426539 BIN2Q9UBW5 565 aaPredicted RBP12.3□□□□□ -0.44
GACAT3-201ENST00000426539 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
GACAT3-201ENST00000426539 MAST2Q6P0Q8 1798 aa12.29□□□□□ -0.44
GACAT3-201ENST00000426539 IGSF3O75054 1194 aa12.29□□□□□ -0.44
GACAT3-201ENST00000426539 INHAP05111 366 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms