RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 LRRC37A3O60309 1634 aa18.26■□□□□ 0.51
PKP4-205ENST00000426248 POLR3DP05423 398 aaPredicted RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 HSPD1P10809 573 aaKnown RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 SF3A1Q15459 793 aaKnown RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 CT47A1Q5JQC4 288 aaPredicted RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 PUS7LQ9H0K6 701 aaKnown RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 DDX19AQ9NUU7 478 aaKnown RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 KINO60870 393 aaKnown RBP18.25■□□□□ 0.51
PKP4-205ENST00000426248 MAP2K2P36507 400 aa18.25■□□□□ 0.51
PKP4-205ENST00000426248 GRAPQ13588 217 aa18.25■□□□□ 0.51
PKP4-205ENST00000426248 SPTY2D1Q68D10 685 aaPredicted RBP18.25■□□□□ 0.51
PKP4-205ENST00000426248 PDILTQ8N807 584 aa18.25■□□□□ 0.51
PKP4-205ENST00000426248 GRAPLQ8TC17 118 aaPredicted RBP18.25■□□□□ 0.51
PKP4-205ENST00000426248 ERCC4Q92889 916 aaPredicted RBP18.25■□□□□ 0.51
PKP4-205ENST00000426248 AATFQ9NY61 560 aaKnown RBP eCLIP18.25■□□□□ 0.511e-7■■□□□ 14.3
PKP4-205ENST00000426248 SLC3A2P08195 630 aaKnown RBP18.25■□□□□ 0.51
PKP4-205ENST00000426248 DOK7Q18PE1 504 aa18.25■□□□□ 0.51
PKP4-205ENST00000426248 TTC6Q86TZ1 520 aa18.25■□□□□ 0.51
PKP4-205ENST00000426248 AMIGO3Q86WK7 504 aa18.25■□□□□ 0.51
PKP4-205ENST00000426248 COL23A1Q86Y22 540 aaPredicted RBP18.25■□□□□ 0.51
PKP4-205ENST00000426248 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
PKP4-205ENST00000426248 MAST3O60307 1309 aa18.25■□□□□ 0.51
PKP4-205ENST00000426248 CACNA1FO60840 1977 aa18.25■□□□□ 0.51
PKP4-205ENST00000426248 PDE6BP35913 854 aa18.25■□□□□ 0.51
PKP4-205ENST00000426248 NOP2P46087 812 aaKnown RBP18.25■□□□□ 0.51
PKP4-205ENST00000426248 SF3B3Q15393 1217 aaKnown RBP18.25■□□□□ 0.51
PKP4-205ENST00000426248 RUFY3Q7L099 469 aa18.25■□□□□ 0.51
PKP4-205ENST00000426248 M0R2C6 588 aa18.24■□□□□ 0.51
PKP4-205ENST00000426248 NCOA7Q8NI08 942 aa18.24■□□□□ 0.51
PKP4-205ENST00000426248 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
PKP4-205ENST00000426248 WTIPA6NIX2 430 aaPredicted RBP18.24■□□□□ 0.51
PKP4-205ENST00000426248 IFIT3O14879 490 aaKnown RBP18.24■□□□□ 0.51
PKP4-205ENST00000426248 GUCY2CP25092 1073 aa18.24■□□□□ 0.51
PKP4-205ENST00000426248 ATP2B2Q01814 1243 aa18.24■□□□□ 0.51
PKP4-205ENST00000426248 ZMYM1Q5SVZ6 1142 aa18.24■□□□□ 0.51
PKP4-205ENST00000426248 MFSD6Q6ZSS7 791 aa18.24■□□□□ 0.51
PKP4-205ENST00000426248 AOPEPQ8N6M6 819 aa18.24■□□□□ 0.51
PKP4-205ENST00000426248 FBXO18Q8NFZ0 1043 aa18.24■□□□□ 0.51
PKP4-205ENST00000426248 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
PKP4-205ENST00000426248 PPM1EQ8WY54 764 aa18.23■□□□□ 0.51
PKP4-205ENST00000426248 BRMS1Q9HCU9 246 aa18.23■□□□□ 0.51
PKP4-205ENST00000426248 ADAM21Q9UKJ8 722 aa18.23■□□□□ 0.51
PKP4-205ENST00000426248 PES1O00541 588 aaKnown RBP18.23■□□□□ 0.51
PKP4-205ENST00000426248 CEP57L1Q8IYX8 460 aa18.23■□□□□ 0.51
PKP4-205ENST00000426248 GIMAP7Q8NHV1 300 aa18.23■□□□□ 0.51
PKP4-205ENST00000426248 KDM3BQ7LBC6 1761 aa18.23■□□□□ 0.51
PKP4-205ENST00000426248 ACTN2P35609 894 aa18.23■□□□□ 0.51
PKP4-205ENST00000426248 GTF2IP78347 998 aa18.23■□□□□ 0.51
PKP4-205ENST00000426248 GUCY1B3Q02153 619 aa18.23■□□□□ 0.51
PKP4-205ENST00000426248 SDR42E1Q8WUS8 393 aa18.23■□□□□ 0.51
PKP4-205ENST00000426248 FGAP02671 866 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 MICU3Q86XE3 530 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 MKNK2Q9HBH9 465 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 BAG3O95817 575 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 CRNKL1Q9BZJ0 848 aaKnown RBP18.22■□□□□ 0.51
PKP4-205ENST00000426248 GOLGA8BA8MQT2 603 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 PRDM1O75626 825 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 ZBTB7AO95365 584 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 LDHCP07864 332 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 TPM1P09493 284 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 ALDH1B1P30837 517 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
PKP4-205ENST00000426248 ZKSCAN3Q9BRR0 538 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 SCAND2PQ9GZW5 306 aaPredicted RBP18.22■□□□□ 0.51
PKP4-205ENST00000426248 RABEP2Q9H5N1 569 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 XDHP47989 1333 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 ABCC12Q96J65 1359 aa18.22■□□□□ 0.51
PKP4-205ENST00000426248 GNG11P61952 73 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 CEP83Q9Y592 693 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 CYP21A2P08686 494 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 CCDC172P0C7W6 258 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 POLD1P28340 1107 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 GSDMDP57764 484 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 DHX8Q14562 1220 aaKnown RBP18.21■□□□□ 0.51
PKP4-205ENST00000426248 NAT10Q9H0A0 1025 aaKnown RBP18.21■□□□□ 0.51
PKP4-205ENST00000426248 SH2B1Q9NRF2 756 aaPredicted RBP18.21■□□□□ 0.51
PKP4-205ENST00000426248 PPEF1O14829 653 aaPredicted RBP18.21■□□□□ 0.51
PKP4-205ENST00000426248 PRC1O43663 620 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 NR1I2O75469 434 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 EIF3JO75822 258 aaKnown RBP18.21■□□□□ 0.51
PKP4-205ENST00000426248 PICALMQ13492 652 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 MCM9Q9NXL9 1143 aa18.21■□□□□ 0.51
PKP4-205ENST00000426248 B4E1Z4 1266 aa18.21■□□□□ 0.5
PKP4-205ENST00000426248 BIN1O00499 593 aa18.21■□□□□ 0.5
PKP4-205ENST00000426248 RXRAP19793 462 aa18.21■□□□□ 0.5
PKP4-205ENST00000426248 TRIM29Q14134 588 aa18.21■□□□□ 0.5
PKP4-205ENST00000426248 TMEM67Q5HYA8 995 aa18.21■□□□□ 0.5
PKP4-205ENST00000426248 EIF3CLB5ME19 914 aaKnown RBP18.2■□□□□ 0.5
PKP4-205ENST00000426248 BBOX1O75936 387 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 RDXP35241 583 aaKnown RBP18.2■□□□□ 0.5
PKP4-205ENST00000426248 CTDSPL2Q05D32 466 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 MUM1L1Q5H9M0 696 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 EIF3CQ99613 913 aaKnown RBP18.2■□□□□ 0.5
PKP4-205ENST00000426248 FUCA2Q9BTY2 467 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 KLF18A0A0U1RQI7 1052 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 ONECUT3O60422 494 aaPredicted RBP18.2■□□□□ 0.5
PKP4-205ENST00000426248 CLSTN1O94985 981 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 PDCP20941 246 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms