RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 PRELPP51888 382 aa17.63■□□□□ 0.41
CALD1-206ENST00000424922 ZNF445P59923 1031 aa17.63■□□□□ 0.41
CALD1-206ENST00000424922 CDC42EP5Q6NZY7 148 aa17.63■□□□□ 0.41
CALD1-206ENST00000424922 AGXT2Q9BYV1 514 aa17.63■□□□□ 0.41
CALD1-206ENST00000424922 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
CALD1-206ENST00000424922 GPHNQ9NQX3 736 aaPredicted RBP17.63■□□□□ 0.41
CALD1-206ENST00000424922 SH2B1Q9NRF2 756 aaPredicted RBP17.63■□□□□ 0.41
CALD1-206ENST00000424922 PDE4CQ08493 712 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 C12orf60Q5U649 245 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 ZSWIM5Q9P217 1185 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.62■□□□□ 0.41
CALD1-206ENST00000424922 WDR19Q8NEZ3 1342 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 MYH8P13535 1937 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 APOBRQ0VD83 1088 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 PICALMQ13492 652 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 GAS2L3Q86XJ1 694 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 AMOTL1Q8IY63 956 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 FAM43AQ8N2R8 423 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 GMLQ99445 158 aa17.62■□□□□ 0.41
CALD1-206ENST00000424922 PRDM1O75626 825 aa17.61■□□□□ 0.41
CALD1-206ENST00000424922 WDHD1O75717 1129 aaPredicted RBP17.61■□□□□ 0.41
CALD1-206ENST00000424922 POLR3DP05423 398 aaPredicted RBP17.61■□□□□ 0.41
CALD1-206ENST00000424922 SLC3A2P08195 630 aaKnown RBP17.61■□□□□ 0.41
CALD1-206ENST00000424922 STK3Q13188 491 aa17.61■□□□□ 0.41
CALD1-206ENST00000424922 CIAPIN1Q6FI81 312 aa17.61■□□□□ 0.41
CALD1-206ENST00000424922 ARHGAP27Q6ZUM4 889 aa17.61■□□□□ 0.41
CALD1-206ENST00000424922 CCDC83Q8IWF9 413 aa17.61■□□□□ 0.41
CALD1-206ENST00000424922 NECAB1Q8N987 351 aa17.61■□□□□ 0.41
CALD1-206ENST00000424922 PRPF40AO75400 957 aaKnown RBP17.6■□□□□ 0.41
CALD1-206ENST00000424922 CFAP100Q494V2 611 aa17.6■□□□□ 0.41
CALD1-206ENST00000424922 FBXL16Q8N461 479 aa17.6■□□□□ 0.41
CALD1-206ENST00000424922 MBD3O95983 291 aa17.6■□□□□ 0.41
CALD1-206ENST00000424922 FGRP09769 529 aa17.6■□□□□ 0.41
CALD1-206ENST00000424922 PLCD1P51178 756 aa17.6■□□□□ 0.41
CALD1-206ENST00000424922 DDX4Q9NQI0 724 aaKnown RBP17.6■□□□□ 0.41
CALD1-206ENST00000424922 PCP11498 1178 aaKnown RBP17.59■□□□□ 0.41
CALD1-206ENST00000424922 OGFOD1Q8N543 542 aa17.59■□□□□ 0.41
CALD1-206ENST00000424922 AGBL3Q8NEM8 1001 aa17.59■□□□□ 0.41
CALD1-206ENST00000424922 ESR2Q92731 530 aa17.59■□□□□ 0.41
CALD1-206ENST00000424922 DYNLL2Q96FJ2 89 aa17.59■□□□□ 0.41
CALD1-206ENST00000424922 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
CALD1-206ENST00000424922 RANBP6O60518 1105 aaKnown RBP17.59■□□□□ 0.41
CALD1-206ENST00000424922 PDE4BQ07343 736 aa17.59■□□□□ 0.41
CALD1-206ENST00000424922 ST3GAL1Q11201 340 aa17.59■□□□□ 0.41
CALD1-206ENST00000424922 TNIP1Q15025 636 aa17.59■□□□□ 0.41
CALD1-206ENST00000424922 ZKSCAN3Q9BRR0 538 aa17.59■□□□□ 0.41
CALD1-206ENST00000424922 PANK2Q9BZ23 570 aa17.59■□□□□ 0.41
CALD1-206ENST00000424922 HDAC9Q9UKV0 1011 aa17.59■□□□□ 0.41
CALD1-206ENST00000424922 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
CALD1-206ENST00000424922 CACNB3P54284 484 aa17.58■□□□□ 0.4
CALD1-206ENST00000424922 NFIAQ12857 509 aa17.58■□□□□ 0.4
CALD1-206ENST00000424922 IGDCC4Q8TDY8 1250 aa17.58■□□□□ 0.4
CALD1-206ENST00000424922 TMEM87BQ96K49 555 aa17.58■□□□□ 0.4
CALD1-206ENST00000424922 PRMT6Q96LA8 375 aaPredicted RBP17.58■□□□□ 0.4
CALD1-206ENST00000424922 ANGEL1Q9UNK9 670 aaKnown RBP17.58■□□□□ 0.4
CALD1-206ENST00000424922 ROBO3Q96MS0 1386 aa17.58■□□□□ 0.4
CALD1-206ENST00000424922 SH2B2O14492 632 aaPredicted RBP17.57■□□□□ 0.4
CALD1-206ENST00000424922 IFIT3O14879 490 aaKnown RBP17.57■□□□□ 0.4
CALD1-206ENST00000424922 ORC4O43929 436 aa17.57■□□□□ 0.4
CALD1-206ENST00000424922 PDIA4P13667 645 aaKnown RBP17.57■□□□□ 0.4
CALD1-206ENST00000424922 GPT2Q8TD30 523 aa17.57■□□□□ 0.4
CALD1-206ENST00000424922 TDRD3Q9H7E2 651 aaKnown RBP17.57■□□□□ 0.4
CALD1-206ENST00000424922 FZD9O00144 591 aa17.57■□□□□ 0.4
CALD1-206ENST00000424922 DTNBO60941 627 aa17.57■□□□□ 0.4
CALD1-206ENST00000424922 TMEM67Q5HYA8 995 aa17.57■□□□□ 0.4
CALD1-206ENST00000424922 SENP2Q9HC62 589 aa17.57■□□□□ 0.4
CALD1-206ENST00000424922 PDIA3P30101 505 aaKnown RBP17.56■□□□□ 0.4
CALD1-206ENST00000424922 EIF6P56537 245 aaKnown RBP17.56■□□□□ 0.4
CALD1-206ENST00000424922 EVCP57679 992 aa17.56■□□□□ 0.4
CALD1-206ENST00000424922 ZSCAN23Q3MJ62 389 aa17.56■□□□□ 0.4
CALD1-206ENST00000424922 CAVIN1Q6NZI2 390 aaKnown RBP17.56■□□□□ 0.4
CALD1-206ENST00000424922 ZNF274Q96GC6 653 aaPredicted RBP17.56■□□□□ 0.4
CALD1-206ENST00000424922 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
CALD1-206ENST00000424922 SMC3Q9UQE7 1217 aa17.56■□□□□ 0.4
CALD1-206ENST00000424922 KLF18A0A0U1RQI7 1052 aa17.56■□□□□ 0.4
CALD1-206ENST00000424922 SART3Q15020 963 aaKnown RBP17.56■□□□□ 0.4
CALD1-206ENST00000424922 DLGAP5Q15398 846 aa17.56■□□□□ 0.4
CALD1-206ENST00000424922 SLC44A5Q8NCS7 719 aa17.56■□□□□ 0.4
CALD1-206ENST00000424922 GTF3C6Q969F1 213 aa17.56■□□□□ 0.4
CALD1-206ENST00000424922 UBAC1Q9BSL1 405 aa17.56■□□□□ 0.4
CALD1-206ENST00000424922 LY9Q9HBG7 655 aa17.56■□□□□ 0.4
CALD1-206ENST00000424922 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
CALD1-206ENST00000424922 SPDYE2BA6NHP3 402 aa17.55■□□□□ 0.4
CALD1-206ENST00000424922 PFKFB2O60825 505 aa17.55■□□□□ 0.4
CALD1-206ENST00000424922 SPDYE6P0CI01 402 aa17.55■□□□□ 0.4
CALD1-206ENST00000424922 YBX3P16989 372 aaKnown RBP eCLIP17.55■□□□□ 0.4
CALD1-206ENST00000424922 NCLP19338 710 aaKnown RBP17.55■□□□□ 0.4
CALD1-206ENST00000424922 LMNB1P20700 586 aa17.55■□□□□ 0.4
CALD1-206ENST00000424922 CCT2P78371 535 aaKnown RBP17.55■□□□□ 0.4
CALD1-206ENST00000424922 SCRN1Q12765 414 aa17.55■□□□□ 0.4
CALD1-206ENST00000424922 TCP10Q12799 353 aa17.55■□□□□ 0.4
CALD1-206ENST00000424922 FAM47AQ5JRC9 791 aa17.55■□□□□ 0.4
CALD1-206ENST00000424922 TMEM87AQ8NBN3 555 aa17.55■□□□□ 0.4
CALD1-206ENST00000424922 IDI2Q9BXS1 227 aa17.55■□□□□ 0.4
CALD1-206ENST00000424922 GJA3Q9Y6H8 435 aa17.55■□□□□ 0.4
CALD1-206ENST00000424922 ERICH2A1L162 156 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 ZSCAN22P10073 491 aaPredicted RBP17.54■□□□□ 0.4
CALD1-206ENST00000424922 NFXL1Q6ZNB6 911 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 TTC6Q86TZ1 520 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 ZFPM1Q8IX07 1006 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms