RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 IL1R1P14778 569 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 ADD1P35611 737 aaKnown RBP19.23■□□□□ 0.67
CMTM3-202ENST00000424011 NT5C2P49902 561 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 CTR9Q6PD62 1173 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 RAB11FIP4Q86YS3 637 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 SP8Q8IXZ3 490 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 NOL10Q9BSC4 688 aaKnown RBP19.23■□□□□ 0.67
CMTM3-202ENST00000424011 CD209Q9NNX6 404 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 QSER1Q2KHR3 1735 aa19.22■□□□□ 0.67
CMTM3-202ENST00000424011 DUOX1Q9NRD9 1551 aa19.22■□□□□ 0.67
CMTM3-202ENST00000424011 SLC51AQ86UW1 340 aa19.22■□□□□ 0.67
CMTM3-202ENST00000424011 DCP1AQ9NPI6 582 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-202ENST00000424011 PPEF1O14829 653 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-202ENST00000424011 GUCY1B3Q02153 619 aa19.22■□□□□ 0.67
CMTM3-202ENST00000424011 PPP2R5BQ15173 497 aa19.22■□□□□ 0.67
CMTM3-202ENST00000424011 SBK1Q52WX2 424 aa19.22■□□□□ 0.67
CMTM3-202ENST00000424011 BRAPQ7Z569 592 aa19.22■□□□□ 0.67
CMTM3-202ENST00000424011 PDGFDQ9GZP0 370 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-202ENST00000424011 USP17L12C9JPN9 530 aa19.21■□□□□ 0.67
CMTM3-202ENST00000424011 USP17L21D6R901 530 aa19.21■□□□□ 0.67
CMTM3-202ENST00000424011 KIF20AO95235 890 aa19.21■□□□□ 0.67
CMTM3-202ENST00000424011 NPR1P16066 1061 aa19.21■□□□□ 0.67
CMTM3-202ENST00000424011 IARSP41252 1262 aaKnown RBP19.21■□□□□ 0.67
CMTM3-202ENST00000424011 IQCA1Q86XH1 822 aa19.21■□□□□ 0.67
CMTM3-202ENST00000424011 TBC1D16Q8TBP0 767 aa19.21■□□□□ 0.67
CMTM3-202ENST00000424011 WASF1Q92558 559 aa19.21■□□□□ 0.67
CMTM3-202ENST00000424011 GTPBP4Q9BZE4 634 aaKnown RBP19.21■□□□□ 0.67
CMTM3-202ENST00000424011 SENP2Q9HC62 589 aa19.21■□□□□ 0.67
CMTM3-202ENST00000424011 STK36Q9NRP7 1315 aa19.21■□□□□ 0.67
CMTM3-202ENST00000424011 CHD4Q14839 1912 aa19.21■□□□□ 0.67
CMTM3-202ENST00000424011 ALDH1B1P30837 517 aa19.2■□□□□ 0.66
CMTM3-202ENST00000424011 UVSSAQ2YD98 709 aa19.2■□□□□ 0.66
CMTM3-202ENST00000424011 ANKRD31Q8N7Z5 1873 aa19.2■□□□□ 0.66
CMTM3-202ENST00000424011 JAG2Q9Y219 1238 aa19.2■□□□□ 0.66
CMTM3-202ENST00000424011 ZKSCAN5Q9Y2L8 839 aa19.2■□□□□ 0.66
CMTM3-202ENST00000424011 CDC27P30260 824 aa19.2■□□□□ 0.66
CMTM3-202ENST00000424011 CEBPZQ03701 1054 aaKnown RBP19.2■□□□□ 0.66
CMTM3-202ENST00000424011 TBC1D22AQ8WUA7 517 aa19.2■□□□□ 0.66
CMTM3-202ENST00000424011 DACT1Q9NYF0 836 aa19.2■□□□□ 0.66
CMTM3-202ENST00000424011 ATP6V0A2Q9Y487 856 aa19.2■□□□□ 0.66
CMTM3-202ENST00000424011 SSRP1Q08945 709 aaKnown RBP19.19■□□□□ 0.66
CMTM3-202ENST00000424011 CAMK4Q16566 473 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 STK11IPQ8N1F8 1099 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 ZSCAN10Q96SZ4 725 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-202ENST00000424011 ZKSCAN3Q9BRR0 538 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 ALG1Q9BT22 464 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 FTOQ9C0B1 505 aaKnown RBP eCLIP19.19■□□□□ 0.66
CMTM3-202ENST00000424011 TMX4Q9H1E5 349 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-202ENST00000424011 NUP62CLQ9H1M0 184 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 RCOR1Q9UKL0 485 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 C6orf229H3BNL8 230 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 ORC4O43929 436 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 IFNAR1P17181 557 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 RXRAP19793 462 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 PPP4CP60510 307 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 PDE4BQ07343 736 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 TRIM29Q14134 588 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 NTRK3Q16288 839 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 RTN1Q16799 776 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 PPP4R3BQ5MIZ7 849 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 SLF2Q8IX21 1173 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 AMOTL1Q8IY63 956 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 TNKSO95271 1327 aa19.19■□□□□ 0.66
CMTM3-202ENST00000424011 TRIM22Q8IYM9 498 aa19.18■□□□□ 0.66
CMTM3-202ENST00000424011 MASTLQ96GX5 879 aa19.18■□□□□ 0.66
CMTM3-202ENST00000424011 FAM217BQ9NTX9 383 aaPredicted RBP19.18■□□□□ 0.66
CMTM3-202ENST00000424011 POLLQ9UGP5 575 aa19.18■□□□□ 0.66
CMTM3-202ENST00000424011 CCDC88AQ3V6T2 1871 aa19.18■□□□□ 0.66
CMTM3-202ENST00000424011 RANBP6O60518 1105 aaKnown RBP19.18■□□□□ 0.66
CMTM3-202ENST00000424011 CCDC144CPQ8IYA2 1237 aa19.18■□□□□ 0.66
CMTM3-202ENST00000424011 BICD2Q8TD16 824 aa19.18■□□□□ 0.66
CMTM3-202ENST00000424011 GPR101Q96P66 508 aaPredicted RBP19.18■□□□□ 0.66
CMTM3-202ENST00000424011 MYL10Q9BUA6 226 aa19.18■□□□□ 0.66
CMTM3-202ENST00000424011 DDX19AQ9NUU7 478 aaKnown RBP19.18■□□□□ 0.66
CMTM3-202ENST00000424011 KIAA1551Q9HCM1 1747 aa19.18■□□□□ 0.66
CMTM3-202ENST00000424011 MYH15Q9Y2K3 1946 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 FMNL1O95466 1100 aaPredicted RBP19.17■□□□□ 0.66
CMTM3-202ENST00000424011 USP5P45974 858 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 SEC23AQ15436 765 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 OTUD7BQ6GQQ9 843 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 ZNF654Q8IZM8 581 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 USP28Q96RU2 1077 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 NR1I2O75469 434 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 MAP3K11Q16584 847 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 FANCBQ8NB91 859 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 SLC16A10Q8TF71 515 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 USP25Q9UHP3 1055 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.17■□□□□ 0.66
CMTM3-202ENST00000424011 MROH7-TTC4A0A0A0MT08 1334 aa19.17■□□□□ 0.66
CMTM3-202ENST00000424011 CYP2D7A0A087X1C5 515 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 CALM1P0DP23 149 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 CALM2P0DP24 149 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 CALM3P0DP25 149 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 IFIT1BQ5T764 474 aaKnown RBP19.16■□□□□ 0.66
CMTM3-202ENST00000424011 CATIPQ7Z7H3 387 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 PHKBQ93100 1093 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 COA1Q9GZY4 146 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 MCM9Q9NXL9 1143 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 RTEL1Q9NZ71 1219 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 CCDC192P0DO97 292 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms