RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PYGBP11216 843 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 TMOD1P28289 359 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 GBP1P32455 592 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 GCLCP48506 637 aaPredicted RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 GNPTABQ3T906 1256 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 SLC45A4Q5BKX6 768 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 PRAMEF18Q5VWM3 479 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 SLC51AQ86UW1 340 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 SIRT2Q8IXJ6 389 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 GPR161Q8N6U8 529 aaKnown RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 WDR66Q8TBY9 1149 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 ANO9A1A5B4 782 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 PPP1R12AO14974 1030 aaPredicted RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 BRPF1P55201 1214 aaPredicted RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 C8orf34Q49A92 452 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 LIN9Q5TKA1 542 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 DUSP27Q5VZP5 1158 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 TTLL5Q6EMB2 1281 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 ZNF354CQ86Y25 554 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 MAFAQ8NHW3 353 aaPredicted RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 RUFY2Q8WXA3 655 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 RPS6KC1Q96S38 1066 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 CCDC77Q9BR77 488 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 TBC1D2Q9BYX2 928 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 HAUS2Q9NVX0 235 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 IPO11Q9UI26 975 aaKnown RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 GINS2Q9Y248 185 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 PPP2R3BQ9Y5P8 575 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 ARHGEF40Q8TER5 1519 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 TAF1P21675 1872 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 TRPM3Q9HCF6 1732 aaPredicted RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 QRICH2Q9H0J4 1663 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 ADGRL3Q9HAR2 1447 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 ERC2O15083 957 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 BRD1O95696 1058 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 CCDC192P0DO97 292 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 RASGRF1Q13972 1273 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 PREPLQ4J6C6 727 aaPredicted RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 CFAP58Q5T655 872 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 RWDD1Q9H446 243 aaPredicted RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 IRAK4Q9NWZ3 460 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 NWD2Q9ULI1 1742 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 RRP8O43159 456 aaKnown RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 PSMC4P43686 418 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 MVPQ14764 893 aaKnown RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 USP37Q86T82 979 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 THNSL1Q8IYQ7 743 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 ZC3H15Q8WU90 426 aaKnown RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 ANP32BQ92688 251 aaKnown RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 RIPOR3Q96MK2 946 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 UHRF1Q96T88 793 aaPredicted RBP4.11□□□□□ -1.75
TOP2A-201ENST00000423485 KATNAL1Q9BW62 490 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 GGA3Q9NZ52 723 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 POLR3AO14802 1390 aaPredicted RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 KIAA0232Q92628 1395 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 KIF16BQ96L93 1317 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 DENND3A2RUS2 1198 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 ALDH1A2O94788 518 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 DDNO94850 711 aaPredicted RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 BAG4O95429 457 aaKnown RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 UBTFL1P0CB47 393 aaPredicted RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 POTEJP0CG39 1038 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 XRCC6P12956 609 aaKnown RBP eCLIP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 TSPY1Q01534 308 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 TBC1D8BQ0IIM8 1120 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 AAMPQ13685 434 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 DAB2IPQ5VWQ8 1189 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 CHST13Q8NET6 341 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 SPACA7Q96KW9 195 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 NCOA3Q9Y6Q9 1424 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 ZNF646O15015 1829 aaPredicted RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 SPATA31A1Q5TZJ5 1347 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 SH3TC1Q8TE82 1336 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 PYGMP11217 842 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 GMPSP49915 693 aaPredicted RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 SYCP1Q15431 976 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 ZFYVE27Q5T4F4 411 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 DDX21Q9NR30 783 aaKnown RBP eCLIP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 FBXO40Q9UH90 709 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 DBR1Q9UK59 544 aaKnown RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 TTF2Q9UNY4 1162 aaKnown RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 LRRC37A3O60309 1634 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 YTHDC2Q9H6S0 1430 aaKnown RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 AKAP13Q12802 2813 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 AKAP11Q9UKA4 1901 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 ERBB3P21860 1342 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 UQCRFS1P1P0C7P4 283 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 ARHGAP15Q53QZ3 475 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 UBAC1Q9BSL1 405 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 UBE2Q2LH0YL09 131 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 FGBP02675 491 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 LIG1P18858 919 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 PTMSP20962 102 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 CHRNA5P30532 468 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 MAPK4P31152 587 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 KPNA1P52294 538 aaPredicted RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 PTPN5P54829 565 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 PLCB4Q15147 1175 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 DGLUCYQ7Z3D6 616 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms