RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
SFXN1-202ENST00000421887 MPSTP25325 297 aa8.17□□□□□ -1.1
SFXN1-202ENST00000421887 CFPP27918 469 aa8.17□□□□□ -1.1
SFXN1-202ENST00000421887 PDE3AQ14432 1141 aa8.17□□□□□ -1.1
SFXN1-202ENST00000421887 EFCAB2Q5VUJ9 269 aa8.17□□□□□ -1.1
SFXN1-202ENST00000421887 GSX1Q9H4S2 264 aaPredicted RBP8.17□□□□□ -1.1
SFXN1-202ENST00000421887 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.17□□□□□ -1.1
SFXN1-202ENST00000421887 MYO5CQ9NQX4 1742 aa8.17□□□□□ -1.1
SFXN1-202ENST00000421887 AOC2O75106 756 aa8.16□□□□□ -1.1
SFXN1-202ENST00000421887 POLR3DP05423 398 aaPredicted RBP8.16□□□□□ -1.1
SFXN1-202ENST00000421887 SAMD9Q5K651 1589 aa8.16□□□□□ -1.1
SFXN1-202ENST00000421887 ZNF518AQ6AHZ1 1483 aa8.16□□□□□ -1.1
SFXN1-202ENST00000421887 BHLHE22Q8NFJ8 381 aaPredicted RBP8.16□□□□□ -1.1
SFXN1-202ENST00000421887 ZSCAN18Q8TBC5 510 aaPredicted RBP8.16□□□□□ -1.1
SFXN1-202ENST00000421887 PLCH2O75038 1416 aa8.15□□□□□ -1.1
SFXN1-202ENST00000421887 CNTLNQ9NXG0 1405 aa8.15□□□□□ -1.1
SFXN1-202ENST00000421887 RANGAP1P46060 587 aaPredicted RBP8.15□□□□□ -1.1
SFXN1-202ENST00000421887 SPRED3Q2MJR0 410 aa8.15□□□□□ -1.1
SFXN1-202ENST00000421887 LCE5AQ5TCM9 118 aa8.15□□□□□ -1.1
SFXN1-202ENST00000421887 ZSWIM9Q86XI8 627 aa8.15□□□□□ -1.1
SFXN1-202ENST00000421887 HRASLS5Q96KN8 279 aa8.15□□□□□ -1.1
SFXN1-202ENST00000421887 FAM53CQ9NYF3 392 aa8.15□□□□□ -1.1
SFXN1-202ENST00000421887 SLAIN2Q9P270 581 aa8.15□□□□□ -1.1
SFXN1-202ENST00000421887 PPP1R9AQ9ULJ8 1098 aa8.15□□□□□ -1.1
SFXN1-202ENST00000421887 ATG7O95352 703 aa8.14□□□□□ -1.11
SFXN1-202ENST00000421887 GRIA4P48058 902 aa8.14□□□□□ -1.11
SFXN1-202ENST00000421887 KCNMB1Q16558 191 aa8.14□□□□□ -1.11
SFXN1-202ENST00000421887 IFI16Q16666 785 aaKnown RBP8.14□□□□□ -1.11
SFXN1-202ENST00000421887 DDX54Q8TDD1 881 aaKnown RBP8.14□□□□□ -1.11
SFXN1-202ENST00000421887 TRIM56Q9BRZ2 755 aaKnown RBP8.14□□□□□ -1.11
SFXN1-202ENST00000421887 WDR18Q9BV38 432 aa8.14□□□□□ -1.11
SFXN1-202ENST00000421887 PIDD1Q9HB75 910 aa8.14□□□□□ -1.11
SFXN1-202ENST00000421887 PRDM7Q9NQW5 492 aa8.14□□□□□ -1.11
SFXN1-202ENST00000421887 U3KQE9 123 aa8.14□□□□□ -1.11
SFXN1-202ENST00000421887 NPATQ14207 1427 aa8.13□□□□□ -1.11
SFXN1-202ENST00000421887 PRRG2O14669 202 aa8.13□□□□□ -1.11
SFXN1-202ENST00000421887 ANGEL2Q5VTE6 544 aaKnown RBP8.13□□□□□ -1.11
SFXN1-202ENST00000421887 LCNL1Q6ZST4 164 aa8.13□□□□□ -1.11
SFXN1-202ENST00000421887 CILP2Q8IUL8 1156 aa8.13□□□□□ -1.11
SFXN1-202ENST00000421887 LRRC56Q8IYG6 542 aaPredicted RBP8.13□□□□□ -1.11
SFXN1-202ENST00000421887 AFAP1Q8N556 730 aa8.13□□□□□ -1.11
SFXN1-202ENST00000421887 REREQ9P2R6 1566 aa8.13□□□□□ -1.11
SFXN1-202ENST00000421887 DIP2CQ9Y2E4 1556 aa8.13□□□□□ -1.11
SFXN1-202ENST00000421887 AGLP35573 1532 aa8.13□□□□□ -1.11
SFXN1-202ENST00000421887 PRXQ9BXM0 1461 aa8.13□□□□□ -1.11
SFXN1-202ENST00000421887 MROH2AA6NES4 1674 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 NCANO14594 1321 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 ZNF503-AS2A6NEH8 195 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 B8ZZF3 427 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 EHHADHQ08426 723 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 ALKBH2Q6NS38 261 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 CCNJLQ8IV13 435 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 LIN7BQ9HAP6 207 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 CRIM1Q9NZV1 1036 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 PLA2R1Q13018 1463 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 PTPRKQ15262 1439 aa8.12□□□□□ -1.11
SFXN1-202ENST00000421887 KDM5CP41229 1560 aa8.11□□□□□ -1.11
SFXN1-202ENST00000421887 ZSCAN22P10073 491 aaPredicted RBP8.11□□□□□ -1.11
SFXN1-202ENST00000421887 SLC23A3Q6PIS1 610 aa8.11□□□□□ -1.11
SFXN1-202ENST00000421887 ANKLE2Q86XL3 938 aa8.11□□□□□ -1.11
SFXN1-202ENST00000421887 LIN37Q96GY3 246 aaPredicted RBP8.11□□□□□ -1.11
SFXN1-202ENST00000421887 ZFYVE28Q9HCC9 887 aa8.11□□□□□ -1.11
SFXN1-202ENST00000421887 CPS1P31327 1500 aa8.11□□□□□ -1.11
SFXN1-202ENST00000421887 ARHGAP5Q13017 1502 aa8.11□□□□□ -1.11
SFXN1-202ENST00000421887 ZNF142P52746 1687 aaPredicted RBP8.11□□□□□ -1.11
SFXN1-202ENST00000421887 ABCA6Q8N139 1617 aa8.11□□□□□ -1.11
SFXN1-202ENST00000421887 TMEM265A0A087WTH1 108 aa8.1□□□□□ -1.11
SFXN1-202ENST00000421887 LEFTY1O75610 366 aa8.1□□□□□ -1.11
SFXN1-202ENST00000421887 CEACAM5P06731 702 aa8.1□□□□□ -1.11
SFXN1-202ENST00000421887 ITIH2P19823 946 aa8.1□□□□□ -1.11
SFXN1-202ENST00000421887 SRPK2P78362 688 aaKnown RBP8.1□□□□□ -1.11
SFXN1-202ENST00000421887 MTMR3Q13615 1198 aa8.1□□□□□ -1.11
SFXN1-202ENST00000421887 FLAD1Q8NFF5 587 aa8.1□□□□□ -1.11
SFXN1-202ENST00000421887 PPP1R16BQ96T49 567 aa8.1□□□□□ -1.11
SFXN1-202ENST00000421887 CDK11AQ9UQ88 783 aaPredicted RBP8.1□□□□□ -1.11
SFXN1-202ENST00000421887 MYO3AQ8NEV4 1616 aa8.1□□□□□ -1.11
SFXN1-202ENST00000421887 CEP170BQ9Y4F5 1589 aaPredicted RBP8.1□□□□□ -1.11
SFXN1-202ENST00000421887 ZMYM3Q14202 1370 aa8.1□□□□□ -1.11
SFXN1-202ENST00000421887 A0A1W2PP55 124 aa8.09□□□□□ -1.11
SFXN1-202ENST00000421887 TMPRSS2O15393 492 aa8.09□□□□□ -1.11
SFXN1-202ENST00000421887 RNGTTO60942 597 aaKnown RBP8.09□□□□□ -1.11
SFXN1-202ENST00000421887 TSPAN15O95858 294 aa8.09□□□□□ -1.11
SFXN1-202ENST00000421887 LIG1P18858 919 aa8.09□□□□□ -1.11
SFXN1-202ENST00000421887 USP5P45974 858 aa8.09□□□□□ -1.11
SFXN1-202ENST00000421887 ECM1Q16610 540 aa8.09□□□□□ -1.11
SFXN1-202ENST00000421887 SYDE1Q6ZW31 735 aaPredicted RBP8.09□□□□□ -1.11
SFXN1-202ENST00000421887 C1QL4Q86Z23 238 aa8.09□□□□□ -1.11
SFXN1-202ENST00000421887 SMYD4Q8IYR2 804 aaPredicted RBP8.09□□□□□ -1.11
SFXN1-202ENST00000421887 GTF3C2Q8WUA4 911 aaPredicted RBP8.09□□□□□ -1.11
SFXN1-202ENST00000421887 TCF12Q99081 682 aa8.09□□□□□ -1.11
SFXN1-202ENST00000421887 LMCD1Q9NZU5 365 aa8.09□□□□□ -1.11
SFXN1-202ENST00000421887 PLAGL2Q9UPG8 496 aa8.09□□□□□ -1.11
SFXN1-202ENST00000421887 POLR1AO95602 1720 aaPredicted RBP8.09□□□□□ -1.11
SFXN1-202ENST00000421887 TCOF1Q13428 1488 aaKnown RBP8.08□□□□□ -1.12
SFXN1-202ENST00000421887 MLH3Q9UHC1 1453 aa8.08□□□□□ -1.12
SFXN1-202ENST00000421887 B3GALT4O96024 378 aa8.08□□□□□ -1.12
SFXN1-202ENST00000421887 OXCT1P55809 520 aa8.08□□□□□ -1.12
SFXN1-202ENST00000421887 ZC3H12CQ9C0D7 883 aaKnown RBP8.08□□□□□ -1.12
SFXN1-202ENST00000421887 MKNK2Q9HBH9 465 aa8.08□□□□□ -1.12
SFXN1-202ENST00000421887 CDK13Q14004 1512 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms