RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 COA7Q96BR5 231 aa11.57□□□□□ -0.56
SCRN1-204ENST00000421434 NSUN4Q96CB9 384 aaKnown RBP11.57□□□□□ -0.56
SCRN1-204ENST00000421434 LRP2BPQ9P2M1 347 aa11.57□□□□□ -0.56
SCRN1-204ENST00000421434 TNNQ9UQP3 1299 aa11.57□□□□□ -0.56
SCRN1-204ENST00000421434 NR2E3Q9Y5X4 410 aa11.57□□□□□ -0.56
SCRN1-204ENST00000421434 PNMA6EA0A0J9YXQ4 647 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 EVI5O60447 810 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 GNAI2P04899 355 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 HMGCS2P54868 508 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 G3BP1Q13283 466 aaKnown RBP eCLIP11.56□□□□□ -0.562e-7■■■□□ 16.5
SCRN1-204ENST00000421434 MTX1Q13505 466 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 IRF5Q13568 498 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 TEX11Q8IYF3 940 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 PXYLP1Q8TE99 480 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 SH3RF3Q8TEJ3 882 aaPredicted RBP11.56□□□□□ -0.56
SCRN1-204ENST00000421434 CLUAP1Q96AJ1 413 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 OSBPL5Q9H0X9 879 aaPredicted RBP11.56□□□□□ -0.56
SCRN1-204ENST00000421434 SNRKQ9NRH2 765 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 PNMA3Q9UL41 463 aa11.56□□□□□ -0.56
SCRN1-204ENST00000421434 USP17L5A8MUK1 530 aa11.55□□□□□ -0.56
SCRN1-204ENST00000421434 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
SCRN1-204ENST00000421434 CAP2P40123 477 aa11.55□□□□□ -0.56
SCRN1-204ENST00000421434 MCAMP43121 646 aa11.55□□□□□ -0.56
SCRN1-204ENST00000421434 PROCA1Q8NCQ7 364 aaPredicted RBP11.55□□□□□ -0.56
SCRN1-204ENST00000421434 ASCC2Q9H1I8 757 aaPredicted RBP11.55□□□□□ -0.56
SCRN1-204ENST00000421434 ZBTB7BO15156 539 aaPredicted RBP11.54□□□□□ -0.56
SCRN1-204ENST00000421434 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
SCRN1-204ENST00000421434 BCAR3O75815 825 aa11.54□□□□□ -0.56
SCRN1-204ENST00000421434 TRIM27P14373 513 aa11.54□□□□□ -0.56
SCRN1-204ENST00000421434 ARID4AP29374 1257 aaPredicted RBP11.54□□□□□ -0.56
SCRN1-204ENST00000421434 FAM110CQ1W6H9 321 aa11.54□□□□□ -0.56
SCRN1-204ENST00000421434 TGFBRAP1Q8WUH2 860 aa11.54□□□□□ -0.56
SCRN1-204ENST00000421434 PAWRQ96IZ0 340 aaKnown RBP11.54□□□□□ -0.56
SCRN1-204ENST00000421434 NOL10Q9BSC4 688 aaKnown RBP11.54□□□□□ -0.56
SCRN1-204ENST00000421434 AATFQ9NY61 560 aaKnown RBP eCLIP11.54□□□□□ -0.56
SCRN1-204ENST00000421434 PI4KBQ9UBF8 816 aa11.54□□□□□ -0.56
SCRN1-204ENST00000421434 PEX10O60683 326 aa11.53□□□□□ -0.56
SCRN1-204ENST00000421434 MAP4K4O95819 1239 aaPredicted RBP11.53□□□□□ -0.56
SCRN1-204ENST00000421434 UQCRFS1P1P0C7P4 283 aa11.53□□□□□ -0.56
SCRN1-204ENST00000421434 GCLCP48506 637 aaPredicted RBP11.53□□□□□ -0.56
SCRN1-204ENST00000421434 TRIM32Q13049 653 aa11.53□□□□□ -0.56
SCRN1-204ENST00000421434 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.56
SCRN1-204ENST00000421434 NAA16Q6N069 864 aaPredicted RBP11.53□□□□□ -0.56
SCRN1-204ENST00000421434 ATF7IPQ6VMQ6 1270 aa11.53□□□□□ -0.56
SCRN1-204ENST00000421434 DIS3LQ8TF46 1054 aaKnown RBP11.53□□□□□ -0.56
SCRN1-204ENST00000421434 PAK6Q9NQU5 681 aaPredicted RBP11.53□□□□□ -0.56
SCRN1-204ENST00000421434 STAP2Q9UGK3 403 aa11.53□□□□□ -0.56
SCRN1-204ENST00000421434 GJD2Q9UKL4 321 aa11.53□□□□□ -0.56
SCRN1-204ENST00000421434 DOCK2Q92608 1830 aa11.53□□□□□ -0.56
SCRN1-204ENST00000421434 DOCK3Q8IZD9 2030 aa11.52□□□□□ -0.56
SCRN1-204ENST00000421434 BAG3O95817 575 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 JAG1P78504 1218 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 OS9Q13438 667 aaPredicted RBP11.52□□□□□ -0.57
SCRN1-204ENST00000421434 MTMR2Q13614 643 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 SHROOM1Q2M3G4 852 aaPredicted RBP11.52□□□□□ -0.57
SCRN1-204ENST00000421434 TTC39AQ5SRH9 613 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 NECAB2Q7Z6G3 386 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 MAPKAPK5Q8IW41 473 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 P2RX7Q99572 595 aaKnown RBP11.52□□□□□ -0.57
SCRN1-204ENST00000421434 CRISPLD2Q9H0B8 497 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCRN1-204ENST00000421434 PRO3102Q9H379 93 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 AS3MTQ9HBK9 375 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.57
SCRN1-204ENST00000421434 PALD1Q9ULE6 856 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 MGAMO43451 1857 aa11.52□□□□□ -0.57
SCRN1-204ENST00000421434 GDF11O95390 407 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 HMGCRP04035 888 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 CYP2B6P20813 491 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 BACE1P56817 501 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 IRX3P78415 501 aaPredicted RBP11.51□□□□□ -0.57
SCRN1-204ENST00000421434 SH3D19Q5HYK7 790 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 CCDC158Q5M9N0 1113 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 ADGRA1Q86SQ6 560 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 CRACR2BQ8N4Y2 399 aaPredicted RBP11.51□□□□□ -0.57
SCRN1-204ENST00000421434 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 TRIM34Q9BYJ4 488 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 DHX36Q9H2U1 1008 aaKnown RBP11.51□□□□□ -0.57
SCRN1-204ENST00000421434 HMX1Q9NP08 348 aaPredicted RBP11.51□□□□□ -0.57
SCRN1-204ENST00000421434 TMOD4Q9NZQ9 345 aa11.51□□□□□ -0.57
SCRN1-204ENST00000421434 SAP30BPQ9UHR5 308 aaKnown RBP11.51□□□□□ -0.57
SCRN1-204ENST00000421434 SURF6O75683 361 aaKnown RBP11.5□□□□□ -0.57
SCRN1-204ENST00000421434 CYP2E1P05181 493 aaPredicted RBP11.5□□□□□ -0.57
SCRN1-204ENST00000421434 ASNSP08243 561 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 PLCG2P16885 1265 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 ZAP70P43403 619 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 PPP4CP60510 307 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 TNNI3KQ59H18 835 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 FOXP4Q8IVH2 680 aaPredicted RBP11.5□□□□□ -0.57
SCRN1-204ENST00000421434 C7orf61Q8IZ16 206 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 TMEM57Q8N5G2 664 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 GPRC5AQ8NFJ5 357 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 WDR18Q9BV38 432 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 C1orf115Q9H7X2 142 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 TXNRD2Q9NNW7 524 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 FPGT-TNNI3KV9GXZ4 949 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 LAMA3Q16787 3333 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 PHIPQ8WWQ0 1821 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 RPTORQ8N122 1335 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms