RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CCDC170Q8IYT3 715 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 RPGRIP1Q96KN7 1286 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 PHF23Q9BUL5 403 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-203ENST00000421085 ODF2LQ9ULJ1 636 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 PYCARDQ9ULZ3 195 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 PPP2R2CQ9Y2T4 447 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 TOPBP1Q92547 1522 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 CTNNA1P35221 906 aaKnown RBP13.75□□□□□ -0.21
CLCN4-203ENST00000421085 DIS3L2Q8IYB7 885 aaKnown RBP13.75□□□□□ -0.21
CLCN4-203ENST00000421085 NR1I2O75469 434 aa13.75□□□□□ -0.21
CLCN4-203ENST00000421085 ERCC3P19447 782 aa13.75□□□□□ -0.21
CLCN4-203ENST00000421085 FBXO31Q5XUX0 539 aaPredicted RBP13.75□□□□□ -0.21
CLCN4-203ENST00000421085 MSANTD4Q8NCY6 345 aa13.75□□□□□ -0.21
CLCN4-203ENST00000421085 KIFAP3Q92845 792 aa13.75□□□□□ -0.21
CLCN4-203ENST00000421085 PDE11AQ9HCR9 933 aa13.75□□□□□ -0.21
CLCN4-203ENST00000421085 PEX19P40855 299 aa13.75□□□□□ -0.21
CLCN4-203ENST00000421085 AKAP4Q5JQC9 854 aa13.75□□□□□ -0.21
CLCN4-203ENST00000421085 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
CLCN4-203ENST00000421085 ANKRD42Q8N9B4 389 aa13.75□□□□□ -0.21
CLCN4-203ENST00000421085 IFIH1Q9BYX4 1025 aaKnown RBP13.75□□□□□ -0.21
CLCN4-203ENST00000421085 ZBTB21Q9ULJ3 1066 aa13.75□□□□□ -0.21
CLCN4-203ENST00000421085 SETSIPP0DME0 302 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 LRCH2Q5VUJ6 765 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 RPAINQ86UA6 219 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 NUF2Q9BZD4 464 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 G2E3Q7L622 706 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 HELBQ8NG08 1087 aaPredicted RBP13.74□□□□□ -0.21
CLCN4-203ENST00000421085 FAM71BQ8TC56 605 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 TMEM87BQ96K49 555 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 FRMD3A2A2Y4 597 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 F8W031 263 aaPredicted RBP13.74□□□□□ -0.21
CLCN4-203ENST00000421085 AOX1Q06278 1338 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 ETF1P62495 437 aaKnown RBP13.74□□□□□ -0.21
CLCN4-203ENST00000421085 SPATS2Q86XZ4 545 aaKnown RBP13.74□□□□□ -0.21
CLCN4-203ENST00000421085 EPSTI1Q96J88 318 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 CCNT1O60563 726 aaKnown RBP13.74□□□□□ -0.21
CLCN4-203ENST00000421085 RNF40O75150 1001 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 MBD4O95243 580 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 KRT15P19012 456 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 PKP1Q13835 747 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 CCDC105Q8IYK2 499 aa13.74□□□□□ -0.21
CLCN4-203ENST00000421085 SLC8A1P32418 973 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 TTC38Q5R3I4 469 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 RAB3IPQ96QF0 476 aaPredicted RBP13.73□□□□□ -0.21
CLCN4-203ENST00000421085 ANGEL1Q9UNK9 670 aaKnown RBP13.73□□□□□ -0.21
CLCN4-203ENST00000421085 RGS16O15492 202 aaPredicted RBP13.73□□□□□ -0.21
CLCN4-203ENST00000421085 RASSF2P50749 326 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 PEX26Q7Z412 305 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 FAM204AQ9H8W3 233 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 CTTNBP2NLQ9P2B4 639 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 RRP15Q9Y3B9 282 aaKnown RBP13.73□□□□□ -0.21
CLCN4-203ENST00000421085 ZMYM4Q5VZL5 1548 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 EXOC5O00471 708 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 NBPF6Q5VWK0 638 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 NBPF4Q96M43 638 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 KIAA1468Q9P260 1216 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
CLCN4-203ENST00000421085 CCT5P48643 541 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 KLHL30Q0D2K2 578 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 CERS3Q8IU89 383 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 SYCE1Q8N0S2 351 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 MED4Q9NPJ6 270 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLCN4-203ENST00000421085 V9GY48 417 aaPredicted RBP13.73□□□□□ -0.21
CLCN4-203ENST00000421085 HIP1RO75146 1068 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 RASA3Q14644 834 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 SNCBQ16143 134 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 GEN1Q17RS7 908 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 ANKRD20A3Q5VUR7 823 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 TTC19Q6DKK2 380 aaPredicted RBP13.73□□□□□ -0.21
CLCN4-203ENST00000421085 BLZF1Q9H2G9 400 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 SEC31AO94979 1220 aaKnown RBP13.73□□□□□ -0.21
CLCN4-203ENST00000421085 ITIH3Q06033 890 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 PHKBQ93100 1093 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
CLCN4-203ENST00000421085 IQGAP2Q13576 1575 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 CETN3O15182 167 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 CALUO43852 315 aaPredicted RBP13.72□□□□□ -0.21
CLCN4-203ENST00000421085 STX2P32856 288 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 ME3Q16798 604 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 STAMQ92783 540 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 I3L4J1 428 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 PARP1P09874 1014 aaKnown RBP13.72□□□□□ -0.21
CLCN4-203ENST00000421085 TMCO4Q5TGY1 634 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 SFMBT2Q5VUG0 894 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 AP1ARQ63HQ0 302 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 KRT40Q6A162 431 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 RRAGAQ7L523 313 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 TBC1D31Q96DN5 1066 aa13.72□□□□□ -0.21
CLCN4-203ENST00000421085 NBPF5PQ86XG9 351 aaPredicted RBP13.72□□□□□ -0.21
CLCN4-203ENST00000421085 FAM207AQ9NSI2 230 aaPredicted RBP13.72□□□□□ -0.21
CLCN4-203ENST00000421085 CLTAP09496 248 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 TXKP42681 527 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 TNNI3KQ59H18 835 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 RAB17Q9H0T7 212 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 SERTAD1Q9UHV2 236 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 FPGT-TNNI3KV9GXZ4 949 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms