RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 PI4KBQ9UBF8 816 aa14.83□□□□□ -0.04
TMEM53-206ENST00000420706 E7EWF7 191 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 SLC3A2P08195 630 aaKnown RBP14.82□□□□□ -0.04
TMEM53-206ENST00000420706 POTEIP0CG38 1075 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 POTEJP0CG39 1038 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 GABPAQ06546 454 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 ADCK5Q3MIX3 580 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 AKNAD1Q5T1N1 836 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 CDAN1Q8IWY9 1227 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 STAG1Q8WVM7 1258 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 KIF2CQ99661 725 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 EHD4Q9H223 541 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 CLEC11AQ9Y240 323 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 PPP2R3BQ9Y5P8 575 aa14.82□□□□□ -0.04
TMEM53-206ENST00000420706 LAMB1P07942 1786 aa14.81□□□□□ -0.04
TMEM53-206ENST00000420706 LAMA4Q16363 1823 aa14.81□□□□□ -0.04
TMEM53-206ENST00000420706 SLURP2P0DP57 97 aa14.81□□□□□ -0.04
TMEM53-206ENST00000420706 CDK8P49336 464 aa14.81□□□□□ -0.04
TMEM53-206ENST00000420706 KRT32Q14532 448 aa14.81□□□□□ -0.04
TMEM53-206ENST00000420706 MFSD6Q6ZSS7 791 aa14.81□□□□□ -0.04
TMEM53-206ENST00000420706 C16orf86Q6ZW13 317 aa14.81□□□□□ -0.04
TMEM53-206ENST00000420706 METTL16Q86W50 562 aaKnown RBP14.81□□□□□ -0.04
TMEM53-206ENST00000420706 CSRNP1Q96S65 589 aa14.81□□□□□ -0.04
TMEM53-206ENST00000420706 RNF41Q9H4P4 317 aaPredicted RBP14.81□□□□□ -0.04
TMEM53-206ENST00000420706 SERPINB13Q9UIV8 391 aa14.81□□□□□ -0.04
TMEM53-206ENST00000420706 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.81□□□□□ -0.04
TMEM53-206ENST00000420706 ROBO3Q96MS0 1386 aa14.81□□□□□ -0.04
TMEM53-206ENST00000420706 MAP3K10Q02779 954 aa14.8□□□□□ -0.04
TMEM53-206ENST00000420706 PDE4BQ07343 736 aa14.8□□□□□ -0.04
TMEM53-206ENST00000420706 NBPF12Q5TAG4 269 aaPredicted RBP14.8□□□□□ -0.04
TMEM53-206ENST00000420706 PRAMEF18Q5VWM3 479 aa14.8□□□□□ -0.04
TMEM53-206ENST00000420706 KRT26Q7Z3Y9 468 aa14.8□□□□□ -0.04
TMEM53-206ENST00000420706 USP48Q86UV5 1035 aa14.8□□□□□ -0.04
TMEM53-206ENST00000420706 SULF1Q8IWU6 871 aa14.8□□□□□ -0.04
TMEM53-206ENST00000420706 NEK1Q96PY6 1258 aa14.8□□□□□ -0.04
TMEM53-206ENST00000420706 SIPA1L1O43166 1804 aa14.8□□□□□ -0.04
TMEM53-206ENST00000420706 ADM5C9JUS6 153 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 ORC4O43929 436 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 TBC1D12O60347 775 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 PCP11498 1178 aaKnown RBP14.79□□□□□ -0.04
TMEM53-206ENST00000420706 PSMA5P28066 241 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 DLK2Q6UY11 383 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 CDC37L1Q7L3B6 337 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 LDHDQ86WU2 507 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 SLC44A5Q8NCS7 719 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 NCOA7Q8NI08 942 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 NKX2-3Q8TAU0 364 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 JAKMIP1Q96N16 626 aaKnown RBP14.79□□□□□ -0.04
TMEM53-206ENST00000420706 TM6SF1Q9BZW5 370 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 DNAJC18Q9H819 358 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 SWAP70Q9UH65 585 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 TAOK2Q9UL54 1235 aa14.79□□□□□ -0.04
TMEM53-206ENST00000420706 NEDD4P46934 1319 aa14.78□□□□□ -0.04
TMEM53-206ENST00000420706 PRDM1O75626 825 aa14.78□□□□□ -0.04
TMEM53-206ENST00000420706 SHMT1P34896 483 aa14.78□□□□□ -0.04
TMEM53-206ENST00000420706 TRDNQ13061 729 aa14.78□□□□□ -0.04
TMEM53-206ENST00000420706 COL9A3Q14050 684 aaPredicted RBP14.78□□□□□ -0.04
TMEM53-206ENST00000420706 MAP1SQ66K74 1059 aaPredicted RBP14.78□□□□□ -0.04
TMEM53-206ENST00000420706 MIGA2Q7L4E1 593 aa14.78□□□□□ -0.04
TMEM53-206ENST00000420706 CRACR2BQ8N4Y2 399 aaPredicted RBP14.78□□□□□ -0.04
TMEM53-206ENST00000420706 GLIS2Q9BZE0 524 aaPredicted RBP14.78□□□□□ -0.04
TMEM53-206ENST00000420706 KRT23Q9C075 422 aa14.78□□□□□ -0.04
TMEM53-206ENST00000420706 CNNM2Q9H8M5 875 aa14.78□□□□□ -0.04
TMEM53-206ENST00000420706 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.78□□□□□ -0.04
TMEM53-206ENST00000420706 MKNK2Q9HBH9 465 aa14.78□□□□□ -0.04
TMEM53-206ENST00000420706 ZNF287Q9HBT7 754 aa14.78□□□□□ -0.04
TMEM53-206ENST00000420706 ZSWIM6Q9HCJ5 1215 aa14.78□□□□□ -0.04
TMEM53-206ENST00000420706 HERC5Q9UII4 1024 aaKnown RBP14.78□□□□□ -0.04
TMEM53-206ENST00000420706 FAM196BA6NMK8 535 aa14.77□□□□□ -0.05
TMEM53-206ENST00000420706 B4E1Z4 1266 aa14.77□□□□□ -0.05
TMEM53-206ENST00000420706 RASA1P20936 1047 aa14.77□□□□□ -0.05
TMEM53-206ENST00000420706 SUPT20HL1Q3ZLR7 823 aa14.77□□□□□ -0.05
TMEM53-206ENST00000420706 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.05
TMEM53-206ENST00000420706 TATDN1Q6P1N9 297 aa14.77□□□□□ -0.05
TMEM53-206ENST00000420706 MB21D2Q8IYB1 491 aaPredicted RBP14.77□□□□□ -0.05
TMEM53-206ENST00000420706 ZNF444Q8N0Y2 327 aaPredicted RBP14.77□□□□□ -0.05
TMEM53-206ENST00000420706 TRIM34Q9BYJ4 488 aa14.77□□□□□ -0.05
TMEM53-206ENST00000420706 TOMM22Q9NS69 142 aa14.77□□□□□ -0.05
TMEM53-206ENST00000420706 KIF3CO14782 793 aa14.76□□□□□ -0.05
TMEM53-206ENST00000420706 KDM4AO75164 1064 aa14.76□□□□□ -0.05
TMEM53-206ENST00000420706 HMGB1P09429 215 aaKnown RBP14.76□□□□□ -0.05
TMEM53-206ENST00000420706 CPA1P15085 419 aa14.76□□□□□ -0.05
TMEM53-206ENST00000420706 CASTP20810 708 aaKnown RBP14.76□□□□□ -0.05
TMEM53-206ENST00000420706 EXOSC10Q01780 885 aaKnown RBP14.76□□□□□ -0.05
TMEM53-206ENST00000420706 BLOC1S2Q6QNY1 142 aa14.76□□□□□ -0.05
TMEM53-206ENST00000420706 RUFY3Q7L099 469 aa14.76□□□□□ -0.05
TMEM53-206ENST00000420706 CYB5R4Q7L1T6 521 aa14.76□□□□□ -0.05
TMEM53-206ENST00000420706 DHX32Q7L7V1 743 aaKnown RBP14.76□□□□□ -0.05
TMEM53-206ENST00000420706 RALYLQ86SE5 291 aaKnown RBP14.76□□□□□ -0.05
TMEM53-206ENST00000420706 ESR2Q92731 530 aa14.76□□□□□ -0.05
TMEM53-206ENST00000420706 HOOK2Q96ED9 719 aa14.76□□□□□ -0.05
TMEM53-206ENST00000420706 TSHZ2Q9NRE2 1034 aa14.76□□□□□ -0.05
TMEM53-206ENST00000420706 ZSWIM5Q9P217 1185 aa14.76□□□□□ -0.05
TMEM53-206ENST00000420706 RANBP6O60518 1105 aaKnown RBP14.75□□□□□ -0.05
TMEM53-206ENST00000420706 RPS6KB1P23443 525 aa14.75□□□□□ -0.05
TMEM53-206ENST00000420706 NT5C2P49902 561 aa14.75□□□□□ -0.05
TMEM53-206ENST00000420706 ANTXR2P58335 489 aa14.75□□□□□ -0.05
TMEM53-206ENST00000420706 TFAP4Q01664 338 aa14.75□□□□□ -0.05
TMEM53-206ENST00000420706 RRP1BQ14684 758 aaKnown RBP14.75□□□□□ -0.05
TMEM53-206ENST00000420706 RABEP1Q15276 862 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms