RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 CHD1LQ86WJ1 897 aa21.98■■□□□ 1.11
ECHDC3-202ENST00000420401 MAPKAPK5Q8IW41 473 aa21.98■■□□□ 1.11
ECHDC3-202ENST00000420401 PI4K2BQ8TCG2 481 aa21.98■■□□□ 1.11
ECHDC3-202ENST00000420401 RIOK1Q9BRS2 568 aaKnown RBP21.98■■□□□ 1.11
ECHDC3-202ENST00000420401 DHX36Q9H2U1 1008 aaKnown RBP21.98■■□□□ 1.11
ECHDC3-202ENST00000420401 ELP3Q9H9T3 547 aa21.98■■□□□ 1.11
ECHDC3-202ENST00000420401 MYO5AQ9Y4I1 1855 aaKnown RBP21.98■■□□□ 1.11
ECHDC3-202ENST00000420401 CENPFP49454 3210 aa21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 COL2A1P02458 1487 aaPredicted RBP21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 MKI67P46013 3256 aaKnown RBP21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 USP5P45974 858 aa21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 CRHR2Q13324 411 aa21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 LRRFIP1Q32MZ4 808 aaKnown RBP21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 KBTBD3Q8NAB2 608 aa21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 STAP2Q9UGK3 403 aa21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 ZNF112Q9UJU3 913 aa21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 FLT1P17948 1338 aa21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 SALL3Q9BXA9 1300 aa21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 HTTP42858 3142 aa21.97■■□□□ 1.11
ECHDC3-202ENST00000420401 TBC1D12O60347 775 aa21.96■■□□□ 1.11
ECHDC3-202ENST00000420401 SP3Q02447 781 aa21.96■■□□□ 1.11
ECHDC3-202ENST00000420401 MAP3K10Q02779 954 aa21.96■■□□□ 1.11
ECHDC3-202ENST00000420401 ZKSCAN4Q969J2 545 aaPredicted RBP21.96■■□□□ 1.11
ECHDC3-202ENST00000420401 TMEM106CQ9BVX2 250 aa21.96■■□□□ 1.11
ECHDC3-202ENST00000420401 CRNKL1Q9BZJ0 848 aaKnown RBP21.96■■□□□ 1.11
ECHDC3-202ENST00000420401 PI4KBQ9UBF8 816 aa21.96■■□□□ 1.11
ECHDC3-202ENST00000420401 EN2P19622 333 aaPredicted RBP21.95■■□□□ 1.1
ECHDC3-202ENST00000420401 PDE1AP54750 535 aa21.95■■□□□ 1.1
ECHDC3-202ENST00000420401 OPTNQ96CV9 577 aa21.95■■□□□ 1.1
ECHDC3-202ENST00000420401 ZFYP08048 801 aaPredicted RBP21.94■■□□□ 1.1
ECHDC3-202ENST00000420401 ARMC5Q96C12 935 aa21.94■■□□□ 1.1
ECHDC3-202ENST00000420401 AK9Q5TCS8 1911 aa21.94■■□□□ 1.1
ECHDC3-202ENST00000420401 PHF20L1A8MW92 1017 aa21.93■■□□□ 1.1
ECHDC3-202ENST00000420401 RNF113AO15541 343 aaKnown RBP21.93■■□□□ 1.1
ECHDC3-202ENST00000420401 HLA-DOAP06340 250 aa21.93■■□□□ 1.1
ECHDC3-202ENST00000420401 INPP5BP32019 993 aa21.93■■□□□ 1.1
ECHDC3-202ENST00000420401 ARHGEF6Q15052 776 aa21.93■■□□□ 1.1
ECHDC3-202ENST00000420401 ERO1BQ86YB8 467 aa21.93■■□□□ 1.1
ECHDC3-202ENST00000420401 FOXP4Q8IVH2 680 aaPredicted RBP21.93■■□□□ 1.1
ECHDC3-202ENST00000420401 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.93■■□□□ 1.1
ECHDC3-202ENST00000420401 HERC5Q9UII4 1024 aaKnown RBP21.93■■□□□ 1.1
ECHDC3-202ENST00000420401 SNCAIPQ9Y6H5 919 aa21.93■■□□□ 1.1
ECHDC3-202ENST00000420401 SPDYE5A6NIY4 337 aa21.92■■□□□ 1.1
ECHDC3-202ENST00000420401 MBD4O95243 580 aa21.92■■□□□ 1.1
ECHDC3-202ENST00000420401 SLFNL1Q499Z3 407 aa21.92■■□□□ 1.1
ECHDC3-202ENST00000420401 NOL9Q5SY16 702 aaKnown RBP21.92■■□□□ 1.1
ECHDC3-202ENST00000420401 LCORLQ8N3X6 602 aa21.92■■□□□ 1.1
ECHDC3-202ENST00000420401 TRIM34Q9BYJ4 488 aa21.92■■□□□ 1.1
ECHDC3-202ENST00000420401 ARMT1Q9H993 441 aa21.92■■□□□ 1.1
ECHDC3-202ENST00000420401 SAP30BPQ9UHR5 308 aaKnown RBP21.92■■□□□ 1.1
ECHDC3-202ENST00000420401 PALD1Q9ULE6 856 aa21.92■■□□□ 1.1
ECHDC3-202ENST00000420401 PPATQ06203 517 aa21.91■■□□□ 1.1
ECHDC3-202ENST00000420401 NBPF11Q86T75 865 aa21.91■■□□□ 1.1
ECHDC3-202ENST00000420401 EVI5LQ96CN4 794 aa21.91■■□□□ 1.1
ECHDC3-202ENST00000420401 OTUD5Q96G74 571 aa21.91■■□□□ 1.1
ECHDC3-202ENST00000420401 FSD1Q9BTV5 496 aa21.91■■□□□ 1.1
ECHDC3-202ENST00000420401 PICK1Q9NRD5 415 aa21.91■■□□□ 1.1
ECHDC3-202ENST00000420401 OTOFQ9HC10 1997 aa21.9■■□□□ 1.1
ECHDC3-202ENST00000420401 CTNND1O60716 968 aaKnown RBP21.9■■□□□ 1.1
ECHDC3-202ENST00000420401 GJA5P36382 358 aa21.9■■□□□ 1.1
ECHDC3-202ENST00000420401 TTC6Q86TZ1 520 aa21.9■■□□□ 1.1
ECHDC3-202ENST00000420401 SCYL3Q8IZE3 742 aa21.9■■□□□ 1.1
ECHDC3-202ENST00000420401 CRACR2BQ8N4Y2 399 aaPredicted RBP21.9■■□□□ 1.1
ECHDC3-202ENST00000420401 PTPN18Q99952 460 aa21.9■■□□□ 1.1
ECHDC3-202ENST00000420401 CHGBP05060 677 aa21.89■■□□□ 1.09
ECHDC3-202ENST00000420401 FXR1P51114 621 aaKnown RBP eCLIP21.89■■□□□ 1.09
ECHDC3-202ENST00000420401 GTF2A2P52657 109 aa21.89■■□□□ 1.09
ECHDC3-202ENST00000420401 PPIL2Q13356 520 aa21.89■■□□□ 1.09
ECHDC3-202ENST00000420401 SLC9C1Q4G0N8 1177 aa21.89■■□□□ 1.09
ECHDC3-202ENST00000420401 CNKSR2Q8WXI2 1034 aa21.89■■□□□ 1.09
ECHDC3-202ENST00000420401 APPBP2Q92624 585 aa21.89■■□□□ 1.09
ECHDC3-202ENST00000420401 PUS7LQ9H0K6 701 aaKnown RBP21.89■■□□□ 1.09
ECHDC3-202ENST00000420401 ATP8A2Q9NTI2 1148 aa21.89■■□□□ 1.09
ECHDC3-202ENST00000420401 TESPA1A2RU30 521 aaPredicted RBP21.88■■□□□ 1.09
ECHDC3-202ENST00000420401 POLR3DP05423 398 aaPredicted RBP21.88■■□□□ 1.09
ECHDC3-202ENST00000420401 SLURP2P0DP57 97 aa21.88■■□□□ 1.09
ECHDC3-202ENST00000420401 SLC4A8Q2Y0W8 1093 aa21.88■■□□□ 1.09
ECHDC3-202ENST00000420401 METTL16Q86W50 562 aaKnown RBP21.88■■□□□ 1.09
ECHDC3-202ENST00000420401 PLEKHM2Q8IWE5 1019 aa21.88■■□□□ 1.09
ECHDC3-202ENST00000420401 DDRGK1Q96HY6 314 aa21.88■■□□□ 1.09
ECHDC3-202ENST00000420401 OSBPL3Q9H4L5 887 aa21.88■■□□□ 1.09
ECHDC3-202ENST00000420401 FAM196BA6NMK8 535 aa21.87■■□□□ 1.09
ECHDC3-202ENST00000420401 CENPBP07199 599 aaPredicted RBP21.87■■□□□ 1.09
ECHDC3-202ENST00000420401 TAF1CQ15572 869 aaPredicted RBP21.87■■□□□ 1.09
ECHDC3-202ENST00000420401 TICAM2Q86XR7 235 aa21.87■■□□□ 1.09
ECHDC3-202ENST00000420401 SDR42E1Q8WUS8 393 aa21.87■■□□□ 1.09
ECHDC3-202ENST00000420401 ZNF333Q96JL9 665 aa21.87■■□□□ 1.09
ECHDC3-202ENST00000420401 ZFYVE28Q9HCC9 887 aa21.87■■□□□ 1.09
ECHDC3-202ENST00000420401 DCP1AQ9NPI6 582 aaPredicted RBP21.87■■□□□ 1.09
ECHDC3-202ENST00000420401 MCM9Q9NXL9 1143 aa21.87■■□□□ 1.09
ECHDC3-202ENST00000420401 SLC4A4Q9Y6R1 1079 aa21.87■■□□□ 1.09
ECHDC3-202ENST00000420401 IRF6O14896 467 aa21.86■■□□□ 1.09
ECHDC3-202ENST00000420401 SNAPC2Q13487 334 aa21.86■■□□□ 1.09
ECHDC3-202ENST00000420401 MS4A4AQ96JQ5 239 aa21.86■■□□□ 1.09
ECHDC3-202ENST00000420401 EHD4Q9H223 541 aa21.86■■□□□ 1.09
ECHDC3-202ENST00000420401 SERPINB13Q9UIV8 391 aa21.86■■□□□ 1.09
ECHDC3-202ENST00000420401 BRCA2P51587 3418 aa21.86■■□□□ 1.09
ECHDC3-202ENST00000420401 FOCADQ5VW36 1801 aa21.85■■□□□ 1.09
ECHDC3-202ENST00000420401 TRIM6-TRIM34B2RNG4 842 aa21.85■■□□□ 1.09
ECHDC3-202ENST00000420401 PRKAB2O43741 272 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms