RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 TEX11Q8IYF3 940 aa21.23■□□□□ 0.99
PTCD1-202ENST00000419981 C1orf115Q9H7X2 142 aa21.23■□□□□ 0.99
PTCD1-202ENST00000419981 MYH8P13535 1937 aa21.22■□□□□ 0.99
PTCD1-202ENST00000419981 SURF6O75683 361 aaKnown RBP21.22■□□□□ 0.99
PTCD1-202ENST00000419981 GRK4P32298 578 aa21.22■□□□□ 0.99
PTCD1-202ENST00000419981 NAA16Q6N069 864 aaPredicted RBP21.22■□□□□ 0.99
PTCD1-202ENST00000419981 CCDC84Q86UT8 332 aaPredicted RBP21.22■□□□□ 0.99
PTCD1-202ENST00000419981 DBNDD2Q9BQY9 259 aa21.22■□□□□ 0.99
PTCD1-202ENST00000419981 SNRKQ9NRH2 765 aa21.22■□□□□ 0.99
PTCD1-202ENST00000419981 SH3RF3Q8TEJ3 882 aaPredicted RBP21.21■□□□□ 0.99
PTCD1-202ENST00000419981 SMCR8Q8TEV9 937 aaPredicted RBP21.21■□□□□ 0.99
PTCD1-202ENST00000419981 AGTPBP1Q9UPW5 1226 aa21.21■□□□□ 0.99
PTCD1-202ENST00000419981 NAV1Q8NEY1 1877 aa21.2■□□□□ 0.98
PTCD1-202ENST00000419981 BAG3O95817 575 aa21.2■□□□□ 0.98
PTCD1-202ENST00000419981 PLCG2P16885 1265 aa21.2■□□□□ 0.98
PTCD1-202ENST00000419981 MIER1Q8N108 512 aa21.2■□□□□ 0.98
PTCD1-202ENST00000419981 TBC1D2Q9BYX2 928 aa21.2■□□□□ 0.98
PTCD1-202ENST00000419981 AATFQ9NY61 560 aaKnown RBP eCLIP21.2■□□□□ 0.98
PTCD1-202ENST00000419981 RLBP1P12271 317 aa21.19■□□□□ 0.98
PTCD1-202ENST00000419981 PRKCZQ05513 592 aa21.19■□□□□ 0.98
PTCD1-202ENST00000419981 MTFR1Q15390 333 aa21.19■□□□□ 0.98
PTCD1-202ENST00000419981 PROCA1Q8NCQ7 364 aaPredicted RBP21.19■□□□□ 0.98
PTCD1-202ENST00000419981 HERC5Q9UII4 1024 aaKnown RBP21.19■□□□□ 0.98
PTCD1-202ENST00000419981 PNMA3Q9UL41 463 aa21.19■□□□□ 0.98
PTCD1-202ENST00000419981 PLXNB2O15031 1838 aa21.19■□□□□ 0.98
PTCD1-202ENST00000419981 MYH7P12883 1935 aa21.18■□□□□ 0.98
PTCD1-202ENST00000419981 CYP2E1P05181 493 aaPredicted RBP21.18■□□□□ 0.98
PTCD1-202ENST00000419981 CAP2P40123 477 aa21.18■□□□□ 0.98
PTCD1-202ENST00000419981 ZNF512BQ96KM6 892 aaPredicted RBP21.18■□□□□ 0.98
PTCD1-202ENST00000419981 NOP58Q9Y2X3 529 aaKnown RBP21.18■□□□□ 0.98
PTCD1-202ENST00000419981 ZBTB7BO15156 539 aaPredicted RBP21.17■□□□□ 0.98
PTCD1-202ENST00000419981 UBXN2AP68543 259 aa21.17■□□□□ 0.98
PTCD1-202ENST00000419981 TREML2Q5T2D2 321 aa21.17■□□□□ 0.98
PTCD1-202ENST00000419981 ZNF280CQ8ND82 737 aa21.17■□□□□ 0.98
PTCD1-202ENST00000419981 DHX36Q9H2U1 1008 aaKnown RBP21.17■□□□□ 0.98
PTCD1-202ENST00000419981 PI4KBQ9UBF8 816 aa21.17■□□□□ 0.98
PTCD1-202ENST00000419981 BIN2Q9UBW5 565 aaPredicted RBP21.17■□□□□ 0.98
PTCD1-202ENST00000419981 GABRQQ9UN88 632 aa21.17■□□□□ 0.98
PTCD1-202ENST00000419981 DDX60LQ5H9U9 1706 aaKnown RBP21.16■□□□□ 0.98
PTCD1-202ENST00000419981 IGSF3O75054 1194 aa21.16■□□□□ 0.98
PTCD1-202ENST00000419981 ZAP70P43403 619 aa21.16■□□□□ 0.98
PTCD1-202ENST00000419981 PPP4CP60510 307 aa21.16■□□□□ 0.98
PTCD1-202ENST00000419981 SPP2Q13103 211 aa21.16■□□□□ 0.98
PTCD1-202ENST00000419981 ADGRA1Q86SQ6 560 aa21.16■□□□□ 0.98
PTCD1-202ENST00000419981 SLAIN1Q8ND83 568 aa21.16■□□□□ 0.98
PTCD1-202ENST00000419981 NKX2-3Q8TAU0 364 aa21.16■□□□□ 0.98
PTCD1-202ENST00000419981 TGFBRAP1Q8WUH2 860 aa21.16■□□□□ 0.98
PTCD1-202ENST00000419981 DBNLQ9UJU6 430 aaKnown RBP21.16■□□□□ 0.98
PTCD1-202ENST00000419981 FLT1P17948 1338 aa21.15■□□□□ 0.98
PTCD1-202ENST00000419981 USP17L5A8MUK1 530 aa21.15■□□□□ 0.98
PTCD1-202ENST00000419981 TNPO2O14787 897 aaKnown RBP21.15■□□□□ 0.98
PTCD1-202ENST00000419981 CCL5P13501 91 aa21.15■□□□□ 0.98
PTCD1-202ENST00000419981 RRP1BQ14684 758 aaKnown RBP21.15■□□□□ 0.98
PTCD1-202ENST00000419981 ANKRD13CQ8N6S4 541 aa21.15■□□□□ 0.98
PTCD1-202ENST00000419981 SHISA4Q96DD7 197 aa21.15■□□□□ 0.98
PTCD1-202ENST00000419981 CCDC8Q9H0W5 538 aaPredicted RBP21.15■□□□□ 0.98
PTCD1-202ENST00000419981 AS3MTQ9HBK9 375 aa21.15■□□□□ 0.98
PTCD1-202ENST00000419981 TLR7Q9NYK1 1049 aaKnown RBP21.15■□□□□ 0.98
PTCD1-202ENST00000419981 PCDH10Q9P2E7 1040 aa21.15■□□□□ 0.98
PTCD1-202ENST00000419981 ALPK3Q96L96 1907 aa21.15■□□□□ 0.98
PTCD1-202ENST00000419981 ZBED9Q6R2W3 1325 aa21.14■□□□□ 0.97
PTCD1-202ENST00000419981 HMGCS2P54868 508 aa21.14■□□□□ 0.97
PTCD1-202ENST00000419981 PABPC4Q13310 644 aaKnown RBP eCLIP21.14■□□□□ 0.97
PTCD1-202ENST00000419981 FAM110CQ1W6H9 321 aa21.14■□□□□ 0.97
PTCD1-202ENST00000419981 DIEXFQ68CQ4 756 aaKnown RBP21.14■□□□□ 0.97
PTCD1-202ENST00000419981 MAPKAPK5Q8IW41 473 aa21.14■□□□□ 0.97
PTCD1-202ENST00000419981 TRIM34Q9BYJ4 488 aa21.14■□□□□ 0.97
PTCD1-202ENST00000419981 RNF208Q9H0X6 261 aa21.14■□□□□ 0.97
PTCD1-202ENST00000419981 PIH1D3Q9NQM4 214 aaKnown RBP21.14■□□□□ 0.97
PTCD1-202ENST00000419981 ADCY3O60266 1144 aa21.13■□□□□ 0.97
PTCD1-202ENST00000419981 GJB1P08034 283 aa21.13■□□□□ 0.97
PTCD1-202ENST00000419981 FLT3LGP49771 235 aa21.13■□□□□ 0.97
PTCD1-202ENST00000419981 HABP4Q5JVS0 413 aaKnown RBP21.13■□□□□ 0.97
PTCD1-202ENST00000419981 CEP85Q6P2H3 762 aa21.13■□□□□ 0.97
PTCD1-202ENST00000419981 EAF2Q96CJ1 260 aaPredicted RBP21.13■□□□□ 0.97
PTCD1-202ENST00000419981 ASNSP08243 561 aa21.12■□□□□ 0.97
PTCD1-202ENST00000419981 GJA8P48165 433 aa21.12■□□□□ 0.97
PTCD1-202ENST00000419981 SH3D19Q5HYK7 790 aa21.12■□□□□ 0.97
PTCD1-202ENST00000419981 CRACR2BQ8N4Y2 399 aaPredicted RBP21.12■□□□□ 0.97
PTCD1-202ENST00000419981 COA7Q96BR5 231 aa21.12■□□□□ 0.97
PTCD1-202ENST00000419981 IDH1O75874 414 aaKnown RBP21.11■□□□□ 0.97
PTCD1-202ENST00000419981 CYP7A1P22680 504 aa21.11■□□□□ 0.97
PTCD1-202ENST00000419981 GCLCP48506 637 aaPredicted RBP21.11■□□□□ 0.97
PTCD1-202ENST00000419981 IRF5Q13568 498 aa21.11■□□□□ 0.97
PTCD1-202ENST00000419981 ERC1Q8IUD2 1116 aa21.11■□□□□ 0.97
PTCD1-202ENST00000419981 FOXP4Q8IVH2 680 aaPredicted RBP21.11■□□□□ 0.97
PTCD1-202ENST00000419981 PXYLP1Q8TE99 480 aa21.11■□□□□ 0.97
PTCD1-202ENST00000419981 DNAJC18Q9H819 358 aa21.11■□□□□ 0.97
PTCD1-202ENST00000419981 PALD1Q9ULE6 856 aa21.11■□□□□ 0.97
PTCD1-202ENST00000419981 BAZ2AQ9UIF9 1905 aaKnown RBP21.1■□□□□ 0.97
PTCD1-202ENST00000419981 HLA-DOAP06340 250 aa21.1■□□□□ 0.97
PTCD1-202ENST00000419981 DYNLL1P63167 89 aaKnown RBP21.1■□□□□ 0.97
PTCD1-202ENST00000419981 MTMR2Q13614 643 aa21.1■□□□□ 0.97
PTCD1-202ENST00000419981 METTL16Q86W50 562 aaKnown RBP21.1■□□□□ 0.97
PTCD1-202ENST00000419981 PANK1Q8TE04 598 aa21.1■□□□□ 0.97
PTCD1-202ENST00000419981 WDR18Q9BV38 432 aa21.1■□□□□ 0.97
PTCD1-202ENST00000419981 UNC93B1Q9H1C4 597 aa21.1■□□□□ 0.97
PTCD1-202ENST00000419981 ASCC2Q9H1I8 757 aaPredicted RBP21.1■□□□□ 0.97
PTCD1-202ENST00000419981 EXOC6BQ9Y2D4 811 aa21.1■□□□□ 0.97
PTCD1-202ENST00000419981 CEP290O15078 2479 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms