RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 DZIP1Q86YF9 867 aaKnown RBP16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ELOA2Q8IYF1 753 aaPredicted RBP16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 FMR1NBQ8N0W7 255 aaPredicted RBP16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 FAM177A1Q8N128 213 aaPredicted RBP16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 RPGRQ92834 1020 aaKnown RBP16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ZSCAN10Q96SZ4 725 aaPredicted RBP16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 BAG3O95817 575 aa16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 MMP1P03956 469 aa16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 ZNF165P49910 485 aa16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CAMK4Q16566 473 aa16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 ANO6Q4KMQ2 910 aa16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 RRP12Q5JTH9 1297 aaKnown RBP16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 SDR42E1Q8WUS8 393 aa16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 MAP3K14Q99558 947 aa16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CEP131Q9UPN4 1083 aa16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 RGPD3A6NKT7 1758 aaPredicted RBP16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 RGPD4Q7Z3J3 1758 aa16.83■□□□□ 0.28
HLA-DPA1-242ENST00000419277 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 MINDY4BA8MYZ0 360 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 RANBP6O60518 1105 aaKnown RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 BBOX1O75936 387 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 BMP15O95972 392 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 ATP2B4P23634 1241 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 TERF1P54274 439 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 KCNQ4P56696 695 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 AKAP17AQ02040 695 aaKnown RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CEBPZQ03701 1054 aaKnown RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 KIAA2012Q0VF49 1180 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 ZRSR1Q15695 479 aaKnown RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 NOSTRINQ8IVI9 506 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 SLF2Q8IX21 1173 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 RBM17Q96I25 401 aaKnown RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 SLC26A6Q9BXS9 759 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 ZNF287Q9HBT7 754 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 DCP1AQ9NPI6 582 aaPredicted RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 ANKIB1Q9P2G1 1089 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 IQSEC3Q9UPP2 1182 aaPredicted RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 LTBP1Q14766 1721 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 NRXN2Q9P2S2 1712 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 BRWD3Q6RI45 1802 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 PLCG2P16885 1265 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 HOXA10P31260 410 aaPredicted RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 IFIT1BQ5T764 474 aaKnown RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 PRR5LQ6MZQ0 368 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 SARM1Q6SZW1 724 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CEP57L1Q8IYX8 460 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CRACR2BQ8N4Y2 399 aaPredicted RBP16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 PODXL2Q9NZ53 605 aa16.82■□□□□ 0.28
HLA-DPA1-242ENST00000419277 POLR3DP05423 398 aaPredicted RBP16.81■□□□□ 0.28
HLA-DPA1-242ENST00000419277 LDHBP07195 334 aaKnown RBP16.81■□□□□ 0.28
HLA-DPA1-242ENST00000419277 FOSBP53539 338 aa16.81■□□□□ 0.28
HLA-DPA1-242ENST00000419277 PPP4CP60510 307 aa16.81■□□□□ 0.28
HLA-DPA1-242ENST00000419277 DHX8Q14562 1220 aaKnown RBP16.81■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CTR9Q6PD62 1173 aa16.81■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CKAP2LQ8IYA6 745 aa16.81■□□□□ 0.28
HLA-DPA1-242ENST00000419277 TBC1D22AQ8WUA7 517 aa16.81■□□□□ 0.28
HLA-DPA1-242ENST00000419277 BPIFA3Q9BQP9 254 aa16.81■□□□□ 0.28
HLA-DPA1-242ENST00000419277 DDX60LQ5H9U9 1706 aaKnown RBP16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 KLRG2A4D1S0 409 aaPredicted RBP16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 GOLGA6L19H0YKK7 550 aa16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CUTAO60888 179 aa16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 GYS1P13807 737 aa16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CDC25BP30305 580 aa16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 NBPF11Q86T75 865 aa16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 ENAHQ8N8S7 591 aaPredicted RBP16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 ZNF384Q8TF68 577 aa16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 PHKBQ93100 1093 aa16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CRAMP1Q96RY5 1269 aa16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CBX8Q9HC52 389 aa16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 BRMS1Q9HCU9 246 aa16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 HOOK1Q9UJC3 728 aaKnown RBP16.8■□□□□ 0.28
HLA-DPA1-242ENST00000419277 KIF28PB7ZC32 967 aa16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 RBM6P78332 1123 aaKnown RBP16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CCDC34Q96HJ3 373 aa16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 SDF4Q9BRK5 362 aa16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 FTOQ9C0B1 505 aaKnown RBP eCLIP16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 GOLPH3LQ9H4A5 285 aa16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CLIC4Q9Y696 253 aa16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 FOCADQ5VW36 1801 aa16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 PRPF3O43395 683 aaKnown RBP16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 KIF5BP33176 963 aa16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 AXDND1Q5T1B0 1012 aaPredicted RBP16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 SENP2Q9HC62 589 aa16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 SUGT1Q9Y2Z0 365 aa16.79■□□□□ 0.28
HLA-DPA1-242ENST00000419277 USP17L12C9JPN9 530 aa16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 USP17L21D6R901 530 aa16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 OFD1O75665 1012 aa16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 IL1R1P14778 569 aa16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 PRDX5P30044 214 aa16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 TPRNQ4KMQ1 711 aa16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 KRT27Q7Z3Y8 459 aa16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 ZNF579Q8NAF0 562 aaKnown RBP16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CTCFLQ8NI51 663 aaPredicted RBP16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 LRRC4BQ9NT99 713 aa16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 AATFQ9NY61 560 aaKnown RBP eCLIP16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 HPSEQ9Y251 543 aa16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 TACC3Q9Y6A5 838 aa16.78■□□□□ 0.28
HLA-DPA1-242ENST00000419277 CDK5RAP2Q96SN8 1893 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms