RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 UBXN2AP68543 259 aa17.71■□□□□ 0.43
PAF1-202ENST00000416728 HABP4Q5JVS0 413 aaKnown RBP17.71■□□□□ 0.43
PAF1-202ENST00000416728 SLAIN1Q8ND83 568 aa17.71■□□□□ 0.43
PAF1-202ENST00000416728 NKX2-3Q8TAU0 364 aa17.71■□□□□ 0.43
PAF1-202ENST00000416728 SH3RF3Q8TEJ3 882 aaPredicted RBP17.71■□□□□ 0.43
PAF1-202ENST00000416728 C1orf115Q9H7X2 142 aa17.71■□□□□ 0.43
PAF1-202ENST00000416728 TNPO2O14787 897 aaKnown RBP17.7■□□□□ 0.42
PAF1-202ENST00000416728 CCL5P13501 91 aa17.7■□□□□ 0.42
PAF1-202ENST00000416728 PLCG2P16885 1265 aa17.7■□□□□ 0.42
PAF1-202ENST00000416728 CAP2P40123 477 aa17.7■□□□□ 0.42
PAF1-202ENST00000416728 SPP2Q13103 211 aa17.7■□□□□ 0.42
PAF1-202ENST00000416728 ITPRIPQ8IWB1 547 aa17.7■□□□□ 0.42
PAF1-202ENST00000416728 PROCA1Q8NCQ7 364 aaPredicted RBP17.7■□□□□ 0.42
PAF1-202ENST00000416728 ZNF280CQ8ND82 737 aa17.7■□□□□ 0.42
PAF1-202ENST00000416728 TBC1D2Q9BYX2 928 aa17.7■□□□□ 0.42
PAF1-202ENST00000416728 AATFQ9NY61 560 aaKnown RBP eCLIP17.7■□□□□ 0.42
PAF1-202ENST00000416728 HERC5Q9UII4 1024 aaKnown RBP17.7■□□□□ 0.42
PAF1-202ENST00000416728 PNMA3Q9UL41 463 aa17.7■□□□□ 0.42
PAF1-202ENST00000416728 GABRQQ9UN88 632 aa17.7■□□□□ 0.42
PAF1-202ENST00000416728 DOCK1Q14185 1865 aa17.7■□□□□ 0.42
PAF1-202ENST00000416728 GJB1P08034 283 aa17.69■□□□□ 0.42
PAF1-202ENST00000416728 TREML2Q5T2D2 321 aa17.69■□□□□ 0.42
PAF1-202ENST00000416728 SHISA4Q96DD7 197 aa17.69■□□□□ 0.42
PAF1-202ENST00000416728 RNF208Q9H0X6 261 aa17.69■□□□□ 0.42
PAF1-202ENST00000416728 DHX36Q9H2U1 1008 aaKnown RBP17.69■□□□□ 0.42
PAF1-202ENST00000416728 PI4KBQ9UBF8 816 aa17.69■□□□□ 0.42
PAF1-202ENST00000416728 CYP2E1P05181 493 aaPredicted RBP17.68■□□□□ 0.42
PAF1-202ENST00000416728 GJA8P48165 433 aa17.68■□□□□ 0.42
PAF1-202ENST00000416728 FLT3LGP49771 235 aa17.68■□□□□ 0.42
PAF1-202ENST00000416728 ANKRD13CQ8N6S4 541 aa17.68■□□□□ 0.42
PAF1-202ENST00000416728 ZNF512BQ96KM6 892 aaPredicted RBP17.68■□□□□ 0.42
PAF1-202ENST00000416728 USP17L5A8MUK1 530 aa17.67■□□□□ 0.42
PAF1-202ENST00000416728 ADCY3O60266 1144 aa17.67■□□□□ 0.42
PAF1-202ENST00000416728 HMGCS2P54868 508 aa17.67■□□□□ 0.42
PAF1-202ENST00000416728 PPP4CP60510 307 aa17.67■□□□□ 0.42
PAF1-202ENST00000416728 PABPC4Q13310 644 aaKnown RBP eCLIP17.67■□□□□ 0.42
PAF1-202ENST00000416728 TGFBRAP1Q8WUH2 860 aa17.67■□□□□ 0.42
PAF1-202ENST00000416728 AS3MTQ9HBK9 375 aa17.67■□□□□ 0.42
PAF1-202ENST00000416728 NOP58Q9Y2X3 529 aaKnown RBP17.67■□□□□ 0.42
PAF1-202ENST00000416728 ZBTB7BO15156 539 aaPredicted RBP17.66■□□□□ 0.42
PAF1-202ENST00000416728 IGSF3O75054 1194 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 RLBP1P12271 317 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 ZAP70P43403 619 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 RRP1BQ14684 758 aaKnown RBP17.66■□□□□ 0.42
PAF1-202ENST00000416728 FAM110CQ1W6H9 321 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 ADGRA1Q86SQ6 560 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 MAPKAPK5Q8IW41 473 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 COA7Q96BR5 231 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 DBNLQ9UJU6 430 aaKnown RBP17.66■□□□□ 0.42
PAF1-202ENST00000416728 FLT1P17948 1338 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 ELNP15502 786 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 GCLCP48506 637 aaPredicted RBP17.66■□□□□ 0.42
PAF1-202ENST00000416728 IRF5Q13568 498 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 PXYLP1Q8TE99 480 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 TRIM34Q9BYJ4 488 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 UNC93B1Q9H1C4 597 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 PIH1D3Q9NQM4 214 aaKnown RBP17.66■□□□□ 0.42
PAF1-202ENST00000416728 TAOK2Q9UL54 1235 aa17.66■□□□□ 0.42
PAF1-202ENST00000416728 PHIPQ8WWQ0 1821 aa17.65■□□□□ 0.42
PAF1-202ENST00000416728 H0YGN5 161 aa17.65■□□□□ 0.42
PAF1-202ENST00000416728 INHAP05111 366 aa17.65■□□□□ 0.42
PAF1-202ENST00000416728 ASNSP08243 561 aa17.65■□□□□ 0.42
PAF1-202ENST00000416728 SH3D19Q5HYK7 790 aa17.65■□□□□ 0.42
PAF1-202ENST00000416728 FOXP4Q8IVH2 680 aaPredicted RBP17.65■□□□□ 0.42
PAF1-202ENST00000416728 CRACR2BQ8N4Y2 399 aaPredicted RBP17.65■□□□□ 0.42
PAF1-202ENST00000416728 U2AF1L4Q8WU68 220 aaKnown RBP17.65■□□□□ 0.42
PAF1-202ENST00000416728 CCDC8Q9H0W5 538 aaPredicted RBP17.65■□□□□ 0.42
PAF1-202ENST00000416728 TLR7Q9NYK1 1049 aaKnown RBP17.65■□□□□ 0.42
PAF1-202ENST00000416728 PTPRFP10586 1907 aa17.64■□□□□ 0.41
PAF1-202ENST00000416728 CYP7A1P22680 504 aa17.64■□□□□ 0.41
PAF1-202ENST00000416728 MIER1Q8N108 512 aa17.64■□□□□ 0.41
PAF1-202ENST00000416728 DPF3Q92784 378 aa17.64■□□□□ 0.41
PAF1-202ENST00000416728 EAF2Q96CJ1 260 aaPredicted RBP17.64■□□□□ 0.41
PAF1-202ENST00000416728 WDR18Q9BV38 432 aa17.64■□□□□ 0.41
PAF1-202ENST00000416728 ASCC2Q9H1I8 757 aaPredicted RBP17.64■□□□□ 0.41
PAF1-202ENST00000416728 DNAJC18Q9H819 358 aa17.64■□□□□ 0.41
PAF1-202ENST00000416728 PALD1Q9ULE6 856 aa17.64■□□□□ 0.41
PAF1-202ENST00000416728 COLQQ9Y215 455 aaPredicted RBP17.64■□□□□ 0.41
PAF1-202ENST00000416728 MAST2Q6P0Q8 1798 aa17.63■□□□□ 0.41
PAF1-202ENST00000416728 IDH1O75874 414 aaKnown RBP17.63■□□□□ 0.41
PAF1-202ENST00000416728 HLA-DOAP06340 250 aa17.63■□□□□ 0.41
PAF1-202ENST00000416728 BACE1P56817 501 aa17.63■□□□□ 0.41
PAF1-202ENST00000416728 MTMR2Q13614 643 aa17.63■□□□□ 0.41
PAF1-202ENST00000416728 CEP85Q6P2H3 762 aa17.63■□□□□ 0.41
PAF1-202ENST00000416728 UBE2Q1Q7Z7E8 422 aa17.63■□□□□ 0.41
PAF1-202ENST00000416728 METTL16Q86W50 562 aaKnown RBP17.63■□□□□ 0.41
PAF1-202ENST00000416728 HTATIP2Q9BUP3 242 aa17.63■□□□□ 0.41
PAF1-202ENST00000416728 TMOD4Q9NZQ9 345 aa17.63■□□□□ 0.41
PAF1-202ENST00000416728 FARP2O94887 1054 aaPredicted RBP17.62■□□□□ 0.41
PAF1-202ENST00000416728 SGPL1O95470 568 aa17.62■□□□□ 0.41
PAF1-202ENST00000416728 DYNLL1P63167 89 aaKnown RBP17.62■□□□□ 0.41
PAF1-202ENST00000416728 IRX3P78415 501 aaPredicted RBP17.62■□□□□ 0.41
PAF1-202ENST00000416728 GINM1Q9NU53 330 aa17.62■□□□□ 0.41
PAF1-202ENST00000416728 SAP30BPQ9UHR5 308 aaKnown RBP17.62■□□□□ 0.41
PAF1-202ENST00000416728 GDF11O95390 407 aa17.61■□□□□ 0.41
PAF1-202ENST00000416728 CERS3Q8IU89 383 aa17.61■□□□□ 0.41
PAF1-202ENST00000416728 ERC1Q8IUD2 1116 aa17.61■□□□□ 0.41
PAF1-202ENST00000416728 MGAMO43451 1857 aa17.6■□□□□ 0.41
PAF1-202ENST00000416728 LOC285556D6RIA3 1793 aa17.6■□□□□ 0.41
PAF1-202ENST00000416728 C19orf81C9J6K1 198 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms