RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 MYH15Q9Y2K3 1946 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 ECM29Q5VYK3 1845 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 ZBTB7AO95365 584 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 AIFM3Q96NN9 605 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 TTF2Q9UNY4 1162 aaKnown RBP12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 MYH6P13533 1939 aa12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 GPR75-ASB3A0A0A6YYF3 556 aa12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 UBE2Q2LH0YL09 131 aa12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 PPP4CP60510 307 aa12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 RESTQ13127 1097 aa12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 AOC3Q16853 763 aa12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 ENAHQ8N8S7 591 aaPredicted RBP12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 CHMP4CQ96CF2 233 aa12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 FAM217BQ9NTX9 383 aaPredicted RBP12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 MKRN1Q9UHC7 482 aaKnown RBP12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 DAGLAQ9Y4D2 1042 aa12.47□□□□□ -0.41
SMPD4P1-201ENST00000416717 POLR3DP05423 398 aaPredicted RBP12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 SLC3A2P08195 630 aaKnown RBP12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 PDIA4P13667 645 aaKnown RBP12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 PLCD1P51178 756 aa12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 KRT85P78386 507 aa12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 CEBPZQ03701 1054 aaKnown RBP12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 SBK1Q52WX2 424 aa12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 SLC44A5Q8NCS7 719 aa12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 C8orf76Q96K31 380 aa12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
SMPD4P1-201ENST00000416717 PDE4BQ07343 736 aa12.46□□□□□ -0.42
SMPD4P1-201ENST00000416717 PICALMQ13492 652 aa12.46□□□□□ -0.42
SMPD4P1-201ENST00000416717 SEC23AQ15436 765 aa12.46□□□□□ -0.42
SMPD4P1-201ENST00000416717 C12orf60Q5U649 245 aa12.46□□□□□ -0.42
SMPD4P1-201ENST00000416717 IQCA1Q86XH1 822 aa12.46□□□□□ -0.42
SMPD4P1-201ENST00000416717 SLF2Q8IX21 1173 aa12.46□□□□□ -0.42
SMPD4P1-201ENST00000416717 ZNF654Q8IZM8 581 aa12.46□□□□□ -0.42
SMPD4P1-201ENST00000416717 TMEM63CQ9P1W3 806 aa12.46□□□□□ -0.42
SMPD4P1-201ENST00000416717 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.42
SMPD4P1-201ENST00000416717 TSPY2A6NKD2 308 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 ECE2O60344 883 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 IFIT1BQ5T764 474 aaKnown RBP12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 CPLX2Q6PUV4 134 aaKnown RBP12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 SLC26A6Q9BXS9 759 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 MKNK2Q9HBH9 465 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 MBD3O95983 291 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 FGRP09769 529 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 IARSP41252 1262 aaKnown RBP12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 RHBDL3P58872 404 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 RTN1Q16799 776 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 GAS2L3Q86XJ1 694 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 KIAA0825Q8IV33 1275 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 AMOTL1Q8IY63 956 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 C7orf43Q8WVR3 580 aa12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 FTOQ9C0B1 505 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMPD4P1-201ENST00000416717 GOLGA6L3A6NEY3 463 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 ORC4O43929 436 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 CDKL5O76039 1030 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 DPEP1P16444 411 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 NTRK3Q16288 839 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 ZSCAN23Q3MJ62 389 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 TMTC2Q8N394 836 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 SPATA32Q96LK8 384 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 ALG1Q9BT22 464 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 GAKO14976 1311 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 FLT1P17948 1338 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 DLEC1Q9Y238 1755 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 PLCG2P16885 1265 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 TFAP4Q01664 338 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 PODNQ7Z5L7 613 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 TTLL6Q8N841 843 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 FANCBQ8NB91 859 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 FAM163AQ96GL9 167 aaPredicted RBP12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 ZSCAN16Q9H4T2 348 aaPredicted RBP12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 PCDHAC2Q9Y5I4 1007 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 FOCADQ5VW36 1801 aa12.44□□□□□ -0.42
SMPD4P1-201ENST00000416717 C10orf71Q711Q0 1435 aa12.43□□□□□ -0.42
SMPD4P1-201ENST00000416717 PPIP5K2O43314 1243 aa12.43□□□□□ -0.42
SMPD4P1-201ENST00000416717 PCP11498 1178 aaKnown RBP12.43□□□□□ -0.42
SMPD4P1-201ENST00000416717 SSRP1Q08945 709 aaKnown RBP12.43□□□□□ -0.42
SMPD4P1-201ENST00000416717 MTMR7Q9Y216 660 aa12.43□□□□□ -0.42
SMPD4P1-201ENST00000416717 hCG_1642624A0A1W2PR95 340 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 SYCE3A1L190 88 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 USP17L3A6NCW0 530 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 USP17L4A6NCW7 530 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 IGSF3O75054 1194 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 GUCY1A2P33402 732 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 RBM5P52756 815 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 UBE2HP62256 183 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 CSPP1Q1MSJ5 1256 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 USP17L1Q7RTZ2 530 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 CATIPQ7Z7H3 387 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 FBXO18Q8NFZ0 1043 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 MTA3Q9BTC8 594 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 USP40Q9NVE5 1235 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 MYH8P13535 1937 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms