RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 GCLCP48506 637 aaPredicted RBP12.4□□□□□ -0.42
MDC1-202ENST00000416571 TIMM10P62072 90 aa12.4□□□□□ -0.42
MDC1-202ENST00000416571 GSTO1P78417 241 aa12.4□□□□□ -0.42
MDC1-202ENST00000416571 SLFN5Q08AF3 891 aa12.4□□□□□ -0.42
MDC1-202ENST00000416571 TREML2Q5T2D2 321 aa12.4□□□□□ -0.42
MDC1-202ENST00000416571 GORABQ5T7V8 394 aa12.4□□□□□ -0.42
MDC1-202ENST00000416571 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
MDC1-202ENST00000416571 API5Q9BZZ5 524 aaKnown RBP12.4□□□□□ -0.42
MDC1-202ENST00000416571 DOCK3Q8IZD9 2030 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 GPR75-ASB3A0A0A6YYF3 556 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 FAM196BA6NMK8 535 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 MAP4K4O95819 1239 aaPredicted RBP12.39□□□□□ -0.43
MDC1-202ENST00000416571 HMGCS2P54868 508 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 MECOMQ03112 1051 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 SPP2Q13103 211 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 ANKLE1Q8NAG6 615 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 ZNF280CQ8ND82 737 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 XAGE2Q96GT9 111 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 NEUROD6Q96NK8 337 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 NOL10Q9BSC4 688 aaKnown RBP12.39□□□□□ -0.43
MDC1-202ENST00000416571 CRISPLD2Q9H0B8 497 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 AS3MTQ9HBK9 375 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 HMX1Q9NP08 348 aaPredicted RBP12.39□□□□□ -0.43
MDC1-202ENST00000416571 STAP2Q9UGK3 403 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 ALPK3Q96L96 1907 aa12.39□□□□□ -0.43
MDC1-202ENST00000416571 NPM3O75607 178 aaKnown RBP12.38□□□□□ -0.43
MDC1-202ENST00000416571 RHBDL3P58872 404 aa12.38□□□□□ -0.43
MDC1-202ENST00000416571 TFCP2Q12800 502 aa12.38□□□□□ -0.43
MDC1-202ENST00000416571 C7orf61Q8IZ16 206 aa12.38□□□□□ -0.43
MDC1-202ENST00000416571 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
MDC1-202ENST00000416571 RAI14Q9P0K7 980 aa12.38□□□□□ -0.43
MDC1-202ENST00000416571 NOB1Q9ULX3 412 aaKnown RBP12.38□□□□□ -0.43
MDC1-202ENST00000416571 COL2A1P02458 1487 aaPredicted RBP12.38□□□□□ -0.43
MDC1-202ENST00000416571 RPTORQ8N122 1335 aa12.37□□□□□ -0.43
MDC1-202ENST00000416571 USP17L5A8MUK1 530 aa12.37□□□□□ -0.43
MDC1-202ENST00000416571 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
MDC1-202ENST00000416571 GNAI3P08754 354 aa12.37□□□□□ -0.43
MDC1-202ENST00000416571 CT47B1P0C2W7 299 aaPredicted RBP12.37□□□□□ -0.43
MDC1-202ENST00000416571 IRX3P78415 501 aaPredicted RBP12.37□□□□□ -0.43
MDC1-202ENST00000416571 DIS3LQ8TF46 1054 aaKnown RBP12.37□□□□□ -0.43
MDC1-202ENST00000416571 LRCH3Q96II8 777 aa12.37□□□□□ -0.43
MDC1-202ENST00000416571 MEIS3Q99687 375 aa12.37□□□□□ -0.43
MDC1-202ENST00000416571 ASCC2Q9H1I8 757 aaPredicted RBP12.37□□□□□ -0.43
MDC1-202ENST00000416571 HERC5Q9UII4 1024 aaKnown RBP12.37□□□□□ -0.43
MDC1-202ENST00000416571 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
MDC1-202ENST00000416571 SOX1O00570 391 aaPredicted RBP12.36□□□□□ -0.43
MDC1-202ENST00000416571 CAP2P40123 477 aa12.36□□□□□ -0.43
MDC1-202ENST00000416571 TEX11Q8IYF3 940 aa12.36□□□□□ -0.43
MDC1-202ENST00000416571 SPATA5Q8NB90 893 aa12.36□□□□□ -0.43
MDC1-202ENST00000416571 NSUN4Q96CB9 384 aaKnown RBP12.36□□□□□ -0.43
MDC1-202ENST00000416571 CDCA7LQ96GN5 454 aa12.36□□□□□ -0.43
MDC1-202ENST00000416571 TRIM34Q9BYJ4 488 aa12.36□□□□□ -0.43
MDC1-202ENST00000416571 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
MDC1-202ENST00000416571 HMG20BQ9P0W2 317 aa12.36□□□□□ -0.43
MDC1-202ENST00000416571 LRP2BPQ9P2M1 347 aa12.36□□□□□ -0.43
MDC1-202ENST00000416571 ZMYND8Q9ULU4 1186 aaPredicted RBP12.36□□□□□ -0.43
MDC1-202ENST00000416571 BMP8BP34820 402 aa12.35□□□□□ -0.43
MDC1-202ENST00000416571 MTMR2Q13614 643 aa12.35□□□□□ -0.43
MDC1-202ENST00000416571 SH3D19Q5HYK7 790 aa12.35□□□□□ -0.43
MDC1-202ENST00000416571 TBC1D9Q6ZT07 1266 aa12.35□□□□□ -0.43
MDC1-202ENST00000416571 CCAR1Q8IX12 1150 aaKnown RBP12.35□□□□□ -0.43
MDC1-202ENST00000416571 C11orf49Q9H6J7 331 aa12.35□□□□□ -0.43
MDC1-202ENST00000416571 PRDM6Q9NQX0 595 aa12.35□□□□□ -0.43
MDC1-202ENST00000416571 SPTBN5Q9NRC6 3674 aaKnown RBP12.34□□□□□ -0.43
MDC1-202ENST00000416571 MAST2Q6P0Q8 1798 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 BAG3O95817 575 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 ASNSP08243 561 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 CYP2B6P20813 491 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 TRIM32Q13049 653 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 PDE3AQ14432 1141 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 PI16Q6UXB8 463 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 CRACR2BQ8N4Y2 399 aaPredicted RBP12.34□□□□□ -0.43
MDC1-202ENST00000416571 ZNF384Q8TF68 577 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 TRIB2Q92519 343 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 GDF15Q99988 308 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 DHX36Q9H2U1 1008 aaKnown RBP12.34□□□□□ -0.43
MDC1-202ENST00000416571 PI4KBQ9UBF8 816 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 MORF4L1Q9UBU8 362 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 GJD2Q9UKL4 321 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 LAMA3Q16787 3333 aa12.34□□□□□ -0.43
MDC1-202ENST00000416571 PLXNB2O15031 1838 aa12.33□□□□□ -0.44
MDC1-202ENST00000416571 UQCRFS1P1P0C7P4 283 aa12.33□□□□□ -0.44
MDC1-202ENST00000416571 PLCG2P16885 1265 aa12.33□□□□□ -0.44
MDC1-202ENST00000416571 SYN1P17600 705 aa12.33□□□□□ -0.44
MDC1-202ENST00000416571 ARID4AP29374 1257 aaPredicted RBP12.33□□□□□ -0.44
MDC1-202ENST00000416571 BACE1P56817 501 aa12.33□□□□□ -0.44
MDC1-202ENST00000416571 G3BP1Q13283 466 aaKnown RBP eCLIP12.33□□□□□ -0.44
MDC1-202ENST00000416571 MTX1Q13505 466 aa12.33□□□□□ -0.44
MDC1-202ENST00000416571 GPRC5AQ8NFJ5 357 aa12.33□□□□□ -0.44
MDC1-202ENST00000416571 SOCS4Q8WXH5 440 aa12.33□□□□□ -0.44
MDC1-202ENST00000416571 CWC22Q9HCG8 908 aaKnown RBP12.33□□□□□ -0.44
MDC1-202ENST00000416571 AATFQ9NY61 560 aaKnown RBP eCLIP12.33□□□□□ -0.44
MDC1-202ENST00000416571 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
MDC1-202ENST00000416571 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
MDC1-202ENST00000416571 ZKSCAN1P17029 563 aaPredicted RBP12.32□□□□□ -0.44
MDC1-202ENST00000416571 MCAMP43121 646 aa12.32□□□□□ -0.44
MDC1-202ENST00000416571 HERVK_113P62684 666 aa12.32□□□□□ -0.44
MDC1-202ENST00000416571 RRP1BQ14684 758 aaKnown RBP12.32□□□□□ -0.44
MDC1-202ENST00000416571 NAA16Q6N069 864 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms