RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 COA7Q96BR5 231 aa23.8■■□□□ 1.4
UBXN4-202ENST00000415164 OSBPL5Q9H0X9 879 aaPredicted RBP23.8■■□□□ 1.4
UBXN4-202ENST00000415164 SNRKQ9NRH2 765 aa23.79■■□□□ 1.4
UBXN4-202ENST00000415164 PNMA6EA0A0J9YXQ4 647 aa23.78■■□□□ 1.4
UBXN4-202ENST00000415164 TBC1D12O60347 775 aa23.78■■□□□ 1.4
UBXN4-202ENST00000415164 TRIM27P14373 513 aa23.78■■□□□ 1.4
UBXN4-202ENST00000415164 MCAMP43121 646 aa23.78■■□□□ 1.4
UBXN4-202ENST00000415164 HMGCS2P54868 508 aa23.78■■□□□ 1.4
UBXN4-202ENST00000415164 OS9Q13438 667 aaPredicted RBP23.78■■□□□ 1.4
UBXN4-202ENST00000415164 SH3RF3Q8TEJ3 882 aaPredicted RBP23.78■■□□□ 1.4
UBXN4-202ENST00000415164 DEFB118Q96PH6 123 aa23.78■■□□□ 1.4
UBXN4-202ENST00000415164 SGPL1O95470 568 aa23.77■■□□□ 1.4
UBXN4-202ENST00000415164 ARID4AP29374 1257 aaPredicted RBP23.77■■□□□ 1.4
UBXN4-202ENST00000415164 TTC39AQ5SRH9 613 aa23.77■■□□□ 1.4
UBXN4-202ENST00000415164 ZNF280CQ8ND82 737 aa23.77■■□□□ 1.4
UBXN4-202ENST00000415164 RBM27Q9P2N5 1060 aaKnown RBP23.77■■□□□ 1.4
UBXN4-202ENST00000415164 NR2E3Q9Y5X4 410 aa23.77■■□□□ 1.4
UBXN4-202ENST00000415164 BCAR3O75815 825 aa23.76■■□□□ 1.39
UBXN4-202ENST00000415164 UQCRFS1P1P0C7P4 283 aa23.76■■□□□ 1.39
UBXN4-202ENST00000415164 PROCA1Q8NCQ7 364 aaPredicted RBP23.76■■□□□ 1.39
UBXN4-202ENST00000415164 TRIM34Q9BYJ4 488 aa23.76■■□□□ 1.39
UBXN4-202ENST00000415164 AATFQ9NY61 560 aaKnown RBP eCLIP23.76■■□□□ 1.39
UBXN4-202ENST00000415164 MGAMO43451 1857 aa23.76■■□□□ 1.39
UBXN4-202ENST00000415164 PABPC4Q13310 644 aaKnown RBP eCLIP23.75■■□□□ 1.39
UBXN4-202ENST00000415164 FAM110CQ1W6H9 321 aa23.75■■□□□ 1.39
UBXN4-202ENST00000415164 NAA16Q6N069 864 aaPredicted RBP23.75■■□□□ 1.39
UBXN4-202ENST00000415164 ATF7IPQ6VMQ6 1270 aa23.75■■□□□ 1.39
UBXN4-202ENST00000415164 PXYLP1Q8TE99 480 aa23.75■■□□□ 1.39
UBXN4-202ENST00000415164 AS3MTQ9HBK9 375 aa23.75■■□□□ 1.39
UBXN4-202ENST00000415164 USP17L5A8MUK1 530 aa23.74■■□□□ 1.39
UBXN4-202ENST00000415164 NPM3O75607 178 aaKnown RBP23.74■■□□□ 1.39
UBXN4-202ENST00000415164 MAP4K4O95819 1239 aaPredicted RBP23.74■■□□□ 1.39
UBXN4-202ENST00000415164 CAP2P40123 477 aa23.74■■□□□ 1.39
UBXN4-202ENST00000415164 IRF5Q13568 498 aa23.74■■□□□ 1.39
UBXN4-202ENST00000415164 UBE2Q1Q7Z7E8 422 aa23.74■■□□□ 1.39
UBXN4-202ENST00000415164 CEP290O15078 2479 aa23.73■■□□□ 1.39
UBXN4-202ENST00000415164 EVI5O60447 810 aa23.73■■□□□ 1.39
UBXN4-202ENST00000415164 BAG3O95817 575 aa23.73■■□□□ 1.39
UBXN4-202ENST00000415164 RRP1BQ14684 758 aaKnown RBP23.73■■□□□ 1.39
UBXN4-202ENST00000415164 CCDC158Q5M9N0 1113 aa23.73■■□□□ 1.39
UBXN4-202ENST00000415164 MAPKAPK5Q8IW41 473 aa23.73■■□□□ 1.39
UBXN4-202ENST00000415164 TGFBRAP1Q8WUH2 860 aa23.73■■□□□ 1.39
UBXN4-202ENST00000415164 PHIPQ8WWQ0 1821 aa23.73■■□□□ 1.39
UBXN4-202ENST00000415164 GCLCP48506 637 aaPredicted RBP23.72■■□□□ 1.39
UBXN4-202ENST00000415164 CRACR2BQ8N4Y2 399 aaPredicted RBP23.72■■□□□ 1.39
UBXN4-202ENST00000415164 TBC1D2Q9BYX2 928 aa23.72■■□□□ 1.39
UBXN4-202ENST00000415164 ASCC2Q9H1I8 757 aaPredicted RBP23.72■■□□□ 1.39
UBXN4-202ENST00000415164 HERC5Q9UII4 1024 aaKnown RBP23.72■■□□□ 1.39
UBXN4-202ENST00000415164 PTPRFP10586 1907 aa23.71■■□□□ 1.39
UBXN4-202ENST00000415164 IRX3P78415 501 aaPredicted RBP23.71■■□□□ 1.39
UBXN4-202ENST00000415164 MTMR2Q13614 643 aa23.71■■□□□ 1.39
UBXN4-202ENST00000415164 TMEM57Q8N5G2 664 aa23.71■■□□□ 1.39
UBXN4-202ENST00000415164 DBNDD2Q9BQY9 259 aa23.71■■□□□ 1.39
UBXN4-202ENST00000415164 TMOD4Q9NZQ9 345 aa23.71■■□□□ 1.39
UBXN4-202ENST00000415164 PI4KBQ9UBF8 816 aa23.71■■□□□ 1.39
UBXN4-202ENST00000415164 COL2A1P02458 1487 aaPredicted RBP23.7■■□□□ 1.38
UBXN4-202ENST00000415164 TRIOBPQ9H2D6 2365 aa23.7■■□□□ 1.38
UBXN4-202ENST00000415164 CCER2I3L3R5 266 aa23.7■■□□□ 1.38
UBXN4-202ENST00000415164 GDF11O95390 407 aa23.7■■□□□ 1.38
UBXN4-202ENST00000415164 TNNI3KQ59H18 835 aa23.7■■□□□ 1.38
UBXN4-202ENST00000415164 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.7■■□□□ 1.38
UBXN4-202ENST00000415164 C1orf115Q9H7X2 142 aa23.7■■□□□ 1.38
UBXN4-202ENST00000415164 SAP30BPQ9UHR5 308 aaKnown RBP23.7■■□□□ 1.38
UBXN4-202ENST00000415164 FPGT-TNNI3KV9GXZ4 949 aa23.7■■□□□ 1.38
UBXN4-202ENST00000415164 ZBTB7BO15156 539 aaPredicted RBP23.69■■□□□ 1.38
UBXN4-202ENST00000415164 PLCG2P16885 1265 aa23.69■■□□□ 1.38
UBXN4-202ENST00000415164 PAWRQ96IZ0 340 aaKnown RBP23.69■■□□□ 1.38
UBXN4-202ENST00000415164 DHX36Q9H2U1 1008 aaKnown RBP23.69■■□□□ 1.38
UBXN4-202ENST00000415164 SURF6O75683 361 aaKnown RBP23.68■■□□□ 1.38
UBXN4-202ENST00000415164 HMGCRP04035 888 aa23.68■■□□□ 1.38
UBXN4-202ENST00000415164 ZKSCAN2Q63HK3 967 aa23.68■■□□□ 1.38
UBXN4-202ENST00000415164 PAK6Q9NQU5 681 aaPredicted RBP23.68■■□□□ 1.38
UBXN4-202ENST00000415164 FLT1P17948 1338 aa23.67■■□□□ 1.38
UBXN4-202ENST00000415164 PEX10O60683 326 aa23.67■■□□□ 1.38
UBXN4-202ENST00000415164 TRIM32Q13049 653 aa23.67■■□□□ 1.38
UBXN4-202ENST00000415164 ADGRA1Q86SQ6 560 aa23.67■■□□□ 1.38
UBXN4-202ENST00000415164 DIS3LQ8TF46 1054 aaKnown RBP23.67■■□□□ 1.38
UBXN4-202ENST00000415164 PALD1Q9ULE6 856 aa23.67■■□□□ 1.38
UBXN4-202ENST00000415164 CYP2E1P05181 493 aaPredicted RBP23.66■■□□□ 1.38
UBXN4-202ENST00000415164 ASNSP08243 561 aa23.66■■□□□ 1.38
UBXN4-202ENST00000415164 CYP2B6P20813 491 aa23.66■■□□□ 1.38
UBXN4-202ENST00000415164 ZAP70P43403 619 aa23.66■■□□□ 1.38
UBXN4-202ENST00000415164 SHROOM1Q2M3G4 852 aaPredicted RBP23.66■■□□□ 1.38
UBXN4-202ENST00000415164 SH3D19Q5HYK7 790 aa23.66■■□□□ 1.38
UBXN4-202ENST00000415164 NECAB2Q7Z6G3 386 aa23.66■■□□□ 1.38
UBXN4-202ENST00000415164 FTSJ3Q8IY81 847 aaKnown RBP23.66■■□□□ 1.38
UBXN4-202ENST00000415164 ATAD5Q96QE3 1844 aa23.66■■□□□ 1.38
UBXN4-202ENST00000415164 HLA-DOAP06340 250 aa23.65■■□□□ 1.38
UBXN4-202ENST00000415164 BACE1P56817 501 aa23.65■■□□□ 1.38
UBXN4-202ENST00000415164 DYNLL1P63167 89 aaKnown RBP23.65■■□□□ 1.38
UBXN4-202ENST00000415164 JAG1P78504 1218 aa23.65■■□□□ 1.38
UBXN4-202ENST00000415164 CCAR1Q8IX12 1150 aaKnown RBP23.65■■□□□ 1.38
UBXN4-202ENST00000415164 P2RX7Q99572 595 aaKnown RBP23.65■■□□□ 1.38
UBXN4-202ENST00000415164 HMX1Q9NP08 348 aaPredicted RBP23.65■■□□□ 1.38
UBXN4-202ENST00000415164 GPR108Q9NPR9 543 aa23.65■■□□□ 1.38
UBXN4-202ENST00000415164 LOC285556D6RIA3 1793 aa23.65■■□□□ 1.38
UBXN4-202ENST00000415164 POLA2Q14181 598 aa23.64■■□□□ 1.37
UBXN4-202ENST00000415164 ITPRIPQ8IWB1 547 aa23.64■■□□□ 1.37
UBXN4-202ENST00000415164 C7orf61Q8IZ16 206 aa23.64■■□□□ 1.37
UBXN4-202ENST00000415164 PAGR1Q9BTK6 254 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms