RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SEMA6CQ9H3T2 930 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 UBP1Q9NZI7 540 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 RAXQ9Y2V3 346 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 POLR3KQ9Y2Y1 108 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 CSADQ9Y600 493 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 CAP2P40123 477 aa6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 DOC2BQ14184 412 aa6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 MAP7Q14244 749 aa6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 RSPO4Q2I0M5 234 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 BEND4Q6ZU67 534 aa6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 SMYD4Q8IYR2 804 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 REXO1Q8N1G1 1221 aaKnown RBP6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 FBLIM1Q8WUP2 373 aa6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 ISL2Q96A47 359 aa6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 GPRASP2Q96D09 838 aa6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 STOML1Q9UBI4 398 aa6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 ADAM30Q9UKF2 790 aa6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 PCOLCE2Q9UKZ9 415 aa6.24□□□□□ -1.41
HMGB1P11-201ENST00000413899 FAM95CA0A1B0GW59 222 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 PRAMEF27A3QJZ7 478 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 TLR3O15455 904 aaKnown RBP6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 ATE1O95260 518 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 NFICP08651 508 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 HCLS1P14317 486 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 RAB6AP20340 208 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 PDE4BQ07343 736 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 COL9A2Q14055 689 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 TMEM201Q5SNT2 666 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 NKD1Q969G9 470 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 C7orf69Q9H7B7 122 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 EHMT1Q9H9B1 1298 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 BRMS1Q9HCU9 246 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 PICK1Q9NRD5 415 aa6.23□□□□□ -1.41
HMGB1P11-201ENST00000413899 GRK4P32298 578 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 ZNF165P49910 485 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 ZC3H6P61129 1189 aaKnown RBP6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 SEZ6Q53EL9 994 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 PAOXQ6QHF9 649 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 SLC51AQ86UW1 340 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 HID1Q8IV36 788 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 SLC43A3Q8NBI5 491 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 C8orf37Q96NL8 207 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 TINF2Q9BSI4 451 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 KCNF1Q9H3M0 494 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 INPP5FQ9Y2H2 1132 aa6.22□□□□□ -1.41
HMGB1P11-201ENST00000413899 RNGTTO60942 597 aaKnown RBP6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 HTR3BO95264 441 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 RXRBP28702 533 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 SOX9P48436 509 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 TNNI2P48788 182 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 ETF1P62495 437 aaKnown RBP6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 RNF43Q68DV7 783 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 CDC37L1Q7L3B6 337 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 UBE3DQ7Z6J8 389 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 MRPL41Q8IXM3 137 aaKnown RBP6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 PSMG3-AS1Q96PY0 264 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 FBRSQ9HAH7 460 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 C1GALT1Q9NS00 363 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 DAGLAQ9Y4D2 1042 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 CORINQ9Y5Q5 1042 aa6.21□□□□□ -1.42
HMGB1P11-201ENST00000413899 HMX2A2RU54 273 aa6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 DYNC1LI2O43237 492 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 DYRK3O43781 588 aa6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 PGRP06401 933 aa6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 GNL2Q13823 731 aaKnown RBP6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 SLBPQ14493 270 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 SLC6A19Q695T7 634 aa6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 GATA6Q92908 595 aa6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 SEC16BQ96JE7 1060 aa6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 PRKAG2Q9UGJ0 569 aa6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 PCDHB14Q9Y5E9 798 aa6.2□□□□□ -1.42
HMGB1P11-201ENST00000413899 GSC2O15499 205 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 GRIN3BO60391 1043 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 LRIG2O94898 1065 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 CST3P01034 146 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 IMPDH2P12268 514 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 PLCG1P19174 1290 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 CLCQ05315 142 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 NFKBIBQ15653 356 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 MCATQ8IVS2 390 aaKnown RBP6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 TMEM87BQ96K49 555 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 GMLQ99445 158 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 CAPN10Q9HC96 672 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 SSU72Q9NP77 194 aaKnown RBP6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 GINM1Q9NU53 330 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 REV1Q9UBZ9 1251 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 TJP2Q9UDY2 1190 aa6.19□□□□□ -1.42
HMGB1P11-201ENST00000413899 MEIS3P2A8K0S8 358 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 ATF4P18848 351 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 FSTP19883 344 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 MCM4P33991 863 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 NFIAQ12857 509 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 NKG7Q16617 165 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 ARMCX6Q7L4S7 300 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 ZAR1Q86SH2 424 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 VPS37DQ86XT2 251 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 ACSF2Q96CM8 615 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 DBNDD2Q9BQY9 259 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms