RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TUBB4BP68371 445 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 RILPL1Q5EBL4 403 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 TMEM67Q5HYA8 995 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 FOXP1Q9H334 677 aaPredicted RBP20.15■□□□□ 0.82
SDCBP-202ENST00000413219 LRP6O75581 1613 aa20.15■□□□□ 0.82
SDCBP-202ENST00000413219 MMP1P03956 469 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 PLCD1P51178 756 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 ADKP55263 362 aaKnown RBP20.14■□□□□ 0.81
SDCBP-202ENST00000413219 PTPN21Q16825 1174 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 NKX2-3Q8TAU0 364 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 SPATA20Q8TB22 786 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 DHX58Q96C10 678 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 SENP2Q9HC62 589 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 PSD3Q9NYI0 1048 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 TBC1D2BQ9UPU7 963 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 PCDH11XQ9BZA7 1347 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 PCDH11YQ9BZA8 1340 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 AKAP11Q9UKA4 1901 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 AKR1B15C9JRZ8 316 aaPredicted RBP20.14■□□□□ 0.81
SDCBP-202ENST00000413219 POTEB2H3BUK9 544 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 SLC26A6Q9BXS9 759 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 SERTAD1Q9UHV2 236 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 RIPOR2Q9Y4F9 1068 aa20.14■□□□□ 0.81
SDCBP-202ENST00000413219 TOB1P50616 345 aaPredicted RBP20.13■□□□□ 0.81
SDCBP-202ENST00000413219 MSL3Q8N5Y2 521 aaKnown RBP20.13■□□□□ 0.81
SDCBP-202ENST00000413219 HNRNPLLQ8WVV9 542 aaKnown RBP20.13■□□□□ 0.81
SDCBP-202ENST00000413219 EPC1Q9H2F5 836 aa20.13■□□□□ 0.81
SDCBP-202ENST00000413219 SLC12A7Q9Y666 1083 aa20.13■□□□□ 0.81
SDCBP-202ENST00000413219 TNS2Q63HR2 1409 aa20.13■□□□□ 0.81
SDCBP-202ENST00000413219 A0A0U1RQG5 324 aaPredicted RBP20.12■□□□□ 0.81
SDCBP-202ENST00000413219 POLR2DO15514 142 aaKnown RBP20.12■□□□□ 0.81
SDCBP-202ENST00000413219 APPP05067 770 aa20.12■□□□□ 0.81
SDCBP-202ENST00000413219 METTL24Q5JXM2 366 aa20.12■□□□□ 0.81
SDCBP-202ENST00000413219 SRGAP1Q7Z6B7 1085 aa20.12■□□□□ 0.81
SDCBP-202ENST00000413219 CCDC12Q8WUD4 166 aaPredicted RBP20.12■□□□□ 0.81
SDCBP-202ENST00000413219 CEP131Q9UPN4 1083 aa20.12■□□□□ 0.81
SDCBP-202ENST00000413219 SRPRBQ9Y5M8 271 aaKnown RBP20.12■□□□□ 0.81
SDCBP-202ENST00000413219 WDR17Q8IZU2 1322 aa20.12■□□□□ 0.81
SDCBP-202ENST00000413219 PRR29P0C7W0 189 aa20.12■□□□□ 0.81
SDCBP-202ENST00000413219 DIS3L2Q8IYB7 885 aaKnown RBP20.12■□□□□ 0.81
SDCBP-202ENST00000413219 ZBTB38Q8NAP3 1195 aaPredicted RBP20.12■□□□□ 0.81
SDCBP-202ENST00000413219 CNNM2Q9H8M5 875 aa20.12■□□□□ 0.81
SDCBP-202ENST00000413219 BTBD18B2RXH4 712 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 MAP2K7O14733 419 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 ACTN4O43707 911 aaKnown RBP20.11■□□□□ 0.81
SDCBP-202ENST00000413219 LONRF2Q1L5Z9 754 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 PROSER2Q86WR7 435 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-202ENST00000413219 CEP112Q8N8E3 955 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 EXOC4Q96A65 974 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 CCDC34Q96HJ3 373 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 MED15Q96RN5 788 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 MRPL44Q9H9J2 332 aaKnown RBP20.11■□□□□ 0.81
SDCBP-202ENST00000413219 PIH1D3Q9NQM4 214 aaKnown RBP20.11■□□□□ 0.81
SDCBP-202ENST00000413219 ZNF532Q9HCE3 1301 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 PDE6AP16499 860 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 HSP90AA4PQ58FG1 418 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 TRIM22Q8IYM9 498 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 AK7Q96M32 723 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 STRBPQ96SI9 672 aaKnown RBP20.11■□□□□ 0.81
SDCBP-202ENST00000413219 ADGRG1Q9Y653 693 aa20.11■□□□□ 0.81
SDCBP-202ENST00000413219 CDHR2Q9BYE9 1310 aa20.1■□□□□ 0.81
SDCBP-202ENST00000413219 TCRBV5S4A2TA0A5A2 114 aa20.1■□□□□ 0.81
SDCBP-202ENST00000413219 IFIT3O14879 490 aaKnown RBP20.1■□□□□ 0.81
SDCBP-202ENST00000413219 SEMA3EO15041 775 aa20.1■□□□□ 0.81
SDCBP-202ENST00000413219 CHMP4BP1P59074 171 aa20.1■□□□□ 0.81
SDCBP-202ENST00000413219 ST5P78524 1137 aa20.1■□□□□ 0.81
SDCBP-202ENST00000413219 KARSQ15046 597 aaKnown RBP20.1■□□□□ 0.81
SDCBP-202ENST00000413219 NKX1-1Q15270 411 aaPredicted RBP20.1■□□□□ 0.81
SDCBP-202ENST00000413219 SPECC1Q5M775 1068 aa20.1■□□□□ 0.81
SDCBP-202ENST00000413219 TRMT44Q8IYL2 757 aaKnown RBP20.1■□□□□ 0.81
SDCBP-202ENST00000413219 NEK11Q8NG66 645 aa20.1■□□□□ 0.81
SDCBP-202ENST00000413219 DESI2Q9BSY9 194 aa20.1■□□□□ 0.81
SDCBP-202ENST00000413219 SAMSN1Q9NSI8 373 aaKnown RBP20.1■□□□□ 0.81
SDCBP-202ENST00000413219 CDC23Q9UJX2 597 aa20.1■□□□□ 0.81
SDCBP-202ENST00000413219 TIAM2Q8IVF5 1701 aa20.1■□□□□ 0.81
SDCBP-202ENST00000413219 UQCRFS1P1P0C7P4 283 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 ARID4AP29374 1257 aaPredicted RBP20.09■□□□□ 0.81
SDCBP-202ENST00000413219 USP5P45974 858 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 RCAN1P53805 252 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 CHRNA2Q15822 529 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 SPATA1Q5VX52 437 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 APTXQ7Z2E3 356 aaKnown RBP20.09■□□□□ 0.81
SDCBP-202ENST00000413219 ZCRB1Q8TBF4 217 aaKnown RBP20.09■□□□□ 0.81
SDCBP-202ENST00000413219 MTA3Q9BTC8 594 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 KRT23Q9C075 422 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 PATL2C9JE40 543 aaKnown RBP20.09■□□□□ 0.81
SDCBP-202ENST00000413219 KIF5CO60282 957 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 IDH1O75874 414 aaKnown RBP20.09■□□□□ 0.81
SDCBP-202ENST00000413219 PBX1P40424 430 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 GRIN1Q05586 938 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 LDHAL6AQ6ZMR3 332 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 PPFIBP1Q86W92 1011 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 MSANTD4Q8NCY6 345 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 CCDC51Q96ER9 411 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 CTAGE1Q96RT6 745 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 MYL10Q9BUA6 226 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 TEX13AQ9BXU3 409 aaPredicted RBP20.09■□□□□ 0.81
SDCBP-202ENST00000413219 ZSWIM5Q9P217 1185 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 RAB21Q9UL25 225 aa20.09■□□□□ 0.81
SDCBP-202ENST00000413219 DEXIO95424 95 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms