RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 USP5P45974 858 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 FUT2Q10981 343 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 WTAPQ15007 396 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 CDC42EP5Q6NZY7 148 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 NFXL1Q6ZNB6 911 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 NBPF11Q86T75 865 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 CCDC125Q86Z20 511 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 ZFPM1Q8IX07 1006 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 CMTR1Q8N1G2 835 aaKnown RBP10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 ESR2Q92731 530 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 PHKBQ93100 1093 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 SHISA4Q96DD7 197 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 EYA3Q99504 573 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 MTA3Q9BTC8 594 aa10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 ORC3Q9UBD5 711 aaPredicted RBP10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 TTF2Q9UNY4 1162 aaKnown RBP10.11□□□□□ -0.79
HMGN1P34-201ENST00000413023 FSD2A1L4K1 749 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 CCDC69A6NI79 296 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 GOLGA8AA7E2F4 631 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 KIF28PB7ZC32 967 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 WDHD1O75717 1129 aaPredicted RBP10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 RASA1P20936 1047 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 METAP2P50579 478 aaKnown RBP eCLIP10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 HMGN5P82970 282 aaKnown RBP10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 TFAP4Q01664 338 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 KIAA2012Q0VF49 1180 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 HHIPL2Q6UWX4 724 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 TTC6Q86TZ1 520 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 MICU3Q86XE3 530 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 TEX11Q8IYF3 940 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 ZNF654Q8IZM8 581 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 TTLL6Q8N841 843 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 FAM184AQ8NB25 1140 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 FANCBQ8NB91 859 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 TMEM63CQ9P1W3 806 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 ARPP21Q9UBL0 812 aaPredicted RBP10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 SLC12A7Q9Y666 1083 aa10.1□□□□□ -0.79
HMGN1P34-201ENST00000413023 TNKSO95271 1327 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 EP400Q96L91 3159 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 NCLP19338 710 aaKnown RBP10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 CDK8P49336 464 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 TROAPQ12815 778 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 R3HDM1Q15032 1099 aaKnown RBP10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 STRIP1Q5VSL9 837 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 CC2D2BQ6DHV5 1058 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 TMTC2Q8N394 836 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 CRACR2BQ8N4Y2 399 aaPredicted RBP10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 FBXO18Q8NFZ0 1043 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 ANKS1AQ92625 1134 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 PGBD1Q96JS3 809 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 SGIP1Q9BQI5 828 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 USP40Q9NVE5 1235 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 QSER1Q2KHR3 1735 aa10.09□□□□□ -0.79
HMGN1P34-201ENST00000413023 FLT1P17948 1338 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 USP17L3A6NCW0 530 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 USP17L4A6NCW7 530 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 G3V3G9 751 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 FIBPO43427 364 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 DHX16O60231 1041 aaKnown RBP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 FMNL1O95466 1100 aaPredicted RBP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 POLR3DP05423 398 aaPredicted RBP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 PCP11498 1178 aaKnown RBP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 PDIA4P13667 645 aaKnown RBP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 VEGFAP15692 232 aaPredicted RBP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 IFNAR1P17181 557 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 PTMSP20962 102 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 CRKP46108 304 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 FKBP1AP62942 108 aaKnown RBP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 NFIAQ12857 509 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 PKN1Q16512 942 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 RTN1Q16799 776 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 SLC35G1Q2M3R5 365 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 TPRNQ4KMQ1 711 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 DCAF8Q5TAQ9 597 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 CAVIN1Q6NZI2 390 aaKnown RBP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 USP17L1Q7RTZ2 530 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 KIAA0825Q8IV33 1275 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 CCDC82Q8N4S0 544 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 UPF1Q92900 1129 aaKnown RBP eCLIP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 NOL10Q9BSC4 688 aaKnown RBP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 UBAC1Q9BSL1 405 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 MRIQ9BWK5 157 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 FTOQ9C0B1 505 aaKnown RBP eCLIP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 TMX4Q9H1E5 349 aaPredicted RBP10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 NID2Q14112 1375 aa10.08□□□□□ -0.8
HMGN1P34-201ENST00000413023 MAST2Q6P0Q8 1798 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 COL4A5P29400 1685 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 ROBO3Q96MS0 1386 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 H3BQV1 296 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 CPLX1O14810 134 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 ADAMTS3O15072 1205 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 PLEKHA8P1O95397 391 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 IARSP41252 1262 aaKnown RBP10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 CACNB3P54284 484 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 GABPAQ06546 454 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 IFFO2Q5TF58 517 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 KRT40Q6A162 431 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms