RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 PCDHAC2Q9Y5I4 1007 aa11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 GSG1L2A8MUP6 293 aa11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 IREB2P48200 963 aaKnown RBP11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 DYNLL1P63167 89 aaKnown RBP11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 NFIAQ12857 509 aa11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 ARMC9Q7Z3E5 817 aa11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 C2orf69Q8N8R5 385 aa11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 CDCA5Q96FF9 252 aa11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 TBC1D2Q9BYX2 928 aa11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 ARMT1Q9H993 441 aa11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 SWAP70Q9UH65 585 aa11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 FOCADQ5VW36 1801 aa11.3□□□□□ -0.6
RN7SKP3-201ENST00000411409 A0A0D9SFI3 127 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 M0R2C6 588 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 REC8O95072 547 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 HSPD1P10809 573 aaKnown RBP11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 CTCFP49711 727 aaPredicted RBP11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 ZSCAN29Q8IWY8 852 aaPredicted RBP11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 IFNL3Q8IZI9 196 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 FAM227BQ96M60 508 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 CSRNP1Q96S65 589 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 ZNF341Q9BYN7 854 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 GLIS2Q9BZE0 524 aaPredicted RBP11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 NAPBQ9H115 298 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 DDX4Q9NQI0 724 aaKnown RBP11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 MCM9Q9NXL9 1143 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 SERPINB13Q9UIV8 391 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 ANAPC4Q9UJX5 808 aa11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 ASTN2O75129 1339 aaPredicted RBP11.29□□□□□ -0.6
RN7SKP3-201ENST00000411409 APPP05067 770 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 POLR3DP05423 398 aaPredicted RBP11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 TDO2P48775 406 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 VEGFBP49765 207 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 TCP10Q12799 353 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 PICALMQ13492 652 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 C12orf60Q5U649 245 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 MAPKAPK5Q8IW41 473 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 ESYT1Q9BSJ8 1104 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 TRIM34Q9BYJ4 488 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 TMEM39BQ9GZU3 492 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 GBA2Q9HCG7 927 aaPredicted RBP11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 PRDM10Q9NQV6 1147 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 ZNF112Q9UJU3 913 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 ABT1Q9ULW3 272 aaKnown RBP11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
RN7SKP3-201ENST00000411409 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 DDTLA6NHG4 134 aaPredicted RBP11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 ADM5C9JUS6 153 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 FOXN1O15353 648 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 CTNND1O60716 968 aaKnown RBP11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 CELF2O95319 508 aaKnown RBP11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 CACNB3P54284 484 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 GABPAQ06546 454 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 PDE4BQ07343 736 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 DEFB115Q30KQ5 88 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 NBPF12Q5TAG4 269 aaPredicted RBP11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 TATDN1Q6P1N9 297 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 CTR9Q6PD62 1173 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 ANKRD13AQ8IZ07 590 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 IL27Q8NEV9 243 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 SDR42E1Q8WUS8 393 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 MAP4K1Q92918 833 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 CCDC17Q96LX7 622 aa11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 SEC62Q99442 399 aaKnown RBP11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 RNF41Q9H4P4 317 aaPredicted RBP11.27□□□□□ -0.61
RN7SKP3-201ENST00000411409 PAPPA2Q9BXP8 1791 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 TRPM7Q96QT4 1865 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 USP17L12C9JPN9 530 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 USP17L21D6R901 530 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 FGAP02671 866 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 FGRP09769 529 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 MAP3K9P80192 1104 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 IMMTQ16891 758 aaKnown RBP11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 NOL9Q5SY16 702 aaKnown RBP11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 LDLRAD1Q5T700 205 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 RNF20Q5VTR2 975 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 ZNF589Q86UQ0 364 aaPredicted RBP11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 CRACR2BQ8N4Y2 399 aaPredicted RBP11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 TSPYL2Q9H2G4 693 aaPredicted RBP11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 PALD1Q9ULE6 856 aa11.26□□□□□ -0.61
RN7SKP3-201ENST00000411409 RASSF10A6NK89 507 aa11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 STK25O00506 426 aa11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 ZNF213O14771 459 aa11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 PRKAB2O43741 272 aa11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 USP2O75604 605 aaPredicted RBP11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 CHGBP05060 677 aa11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 MAP2K1Q02750 393 aaPredicted RBP11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 SLFNL1Q499Z3 407 aa11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 CST9Q5W186 159 aa11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 C16orf86Q6ZW13 317 aa11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 ZFPM1Q8IX07 1006 aa11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 CCDC102AQ96A19 550 aa11.25□□□□□ -0.61
RN7SKP3-201ENST00000411409 BEGAINQ9BUH8 593 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms